RNA–Protein interactions for RNA: ENST00000562778.1

MAP1LC3B-203, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 4

Gene MAP1LC3B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-203ENST00000562778 BCANQ96GW7 911 aa28.51■■■□□ 2.15
MAP1LC3B-203ENST00000562778 HFM1A2PYH4 1435 aa28.5■■■□□ 2.15
MAP1LC3B-203ENST00000562778 TOM1O60784 492 aa28.49■■■□□ 2.15
MAP1LC3B-203ENST00000562778 NUTM2DQ5VT03 806 aaPredicted RBP28.49■■■□□ 2.15
MAP1LC3B-203ENST00000562778 ALKQ9UM73 1620 aa28.48■■■□□ 2.15
MAP1LC3B-203ENST00000562778 SPHKAPQ2M3C7 1700 aa28.47■■■□□ 2.15
MAP1LC3B-203ENST00000562778 PPP1R15AO75807 674 aaPredicted RBP28.47■■■□□ 2.15
MAP1LC3B-203ENST00000562778 XIRP1Q702N8 1843 aaKnown RBP28.44■■■□□ 2.14
MAP1LC3B-203ENST00000562778 TRIM52Q96A61 297 aa28.44■■■□□ 2.14
MAP1LC3B-203ENST00000562778 PLEKHG1Q9ULL1 1385 aa28.44■■■□□ 2.14
MAP1LC3B-203ENST00000562778 KCNA6P17658 529 aa28.42■■■□□ 2.14
MAP1LC3B-203ENST00000562778 HDGFP51858 240 aaKnown RBP28.41■■■□□ 2.14
MAP1LC3B-203ENST00000562778 HSPA1LP34931 641 aa28.4■■■□□ 2.14
MAP1LC3B-203ENST00000562778 RBM33Q96EV2 1170 aaKnown RBP28.4■■■□□ 2.14
MAP1LC3B-203ENST00000562778 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.39■■■□□ 2.14
MAP1LC3B-203ENST00000562778 TMEM94Q12767 1356 aa28.37■■■□□ 2.13
MAP1LC3B-203ENST00000562778 CLTCL1P53675 1640 aa28.36■■■□□ 2.13
MAP1LC3B-203ENST00000562778 PROSER2Q86WR7 435 aaPredicted RBP28.35■■■□□ 2.13
MAP1LC3B-203ENST00000562778 NWD1Q149M9 1564 aa28.35■■■□□ 2.13
MAP1LC3B-203ENST00000562778 DISP3Q9P2K9 1392 aa28.34■■■□□ 2.13
MAP1LC3B-203ENST00000562778 ADAMTS13Q76LX8 1427 aa28.34■■■□□ 2.13
MAP1LC3B-203ENST00000562778 TRPM2O94759 1503 aa28.33■■■□□ 2.13
MAP1LC3B-203ENST00000562778 SLC4A1APQ9BWU0 796 aaKnown RBP28.33■■■□□ 2.13
MAP1LC3B-203ENST00000562778 ZNF326Q5BKZ1 582 aaKnown RBP28.32■■■□□ 2.12
MAP1LC3B-203ENST00000562778 CHD2O14647 1828 aaKnown RBP28.32■■■□□ 2.12
MAP1LC3B-203ENST00000562778 TBX22Q9Y458 520 aa28.31■■■□□ 2.12
MAP1LC3B-203ENST00000562778 NKTRP30414 1462 aaKnown RBP28.3■■■□□ 2.12
MAP1LC3B-203ENST00000562778 FOXD1Q16676 465 aa28.28■■■□□ 2.12
MAP1LC3B-203ENST00000562778 KIF1BO60333 1816 aa28.25■■■□□ 2.11
MAP1LC3B-203ENST00000562778 NRXN3Q9Y4C0 1643 aa28.24■■■□□ 2.11
MAP1LC3B-203ENST00000562778 DIP2AQ14689 1571 aa28.24■■■□□ 2.11
MAP1LC3B-203ENST00000562778 NEXMIFQ5QGS0 1516 aa28.22■■■□□ 2.11
MAP1LC3B-203ENST00000562778 PTPRUQ92729 1446 aa28.19■■■□□ 2.1
MAP1LC3B-203ENST00000562778 SETBP1Q9Y6X0 1596 aa28.18■■■□□ 2.1
MAP1LC3B-203ENST00000562778 ILDR2Q71H61 639 aa28.17■■■□□ 2.1
MAP1LC3B-203ENST00000562778 MPHOSPH9Q99550 1183 aa28.17■■■□□ 2.1
MAP1LC3B-203ENST00000562778 MSH6P52701 1360 aa28.16■■■□□ 2.1
MAP1LC3B-203ENST00000562778 PIK3R4Q99570 1358 aa28.16■■■□□ 2.1
MAP1LC3B-203ENST00000562778 AMOTL2Q9Y2J4 779 aa28.16■■■□□ 2.1
MAP1LC3B-203ENST00000562778 SETD5Q9C0A6 1442 aa28.15■■■□□ 2.1
MAP1LC3B-203ENST00000562778 METP08581 1390 aa28.13■■■□□ 2.09
MAP1LC3B-203ENST00000562778 FAM135BQ49AJ0 1406 aa28.12■■■□□ 2.09
MAP1LC3B-203ENST00000562778 C14orf37Q86TY3 774 aa28.12■■■□□ 2.09
MAP1LC3B-203ENST00000562778 ROBO1Q9Y6N7 1651 aa28.1■■■□□ 2.09
MAP1LC3B-203ENST00000562778 MED1Q15648 1581 aaPredicted RBP28.1■■■□□ 2.09
MAP1LC3B-203ENST00000562778 XRN1Q8IZH2 1706 aaKnown RBP28.09■■■□□ 2.09
MAP1LC3B-203ENST00000562778 SLAIN2Q9P270 581 aa28.08■■■□□ 2.09
MAP1LC3B-203ENST00000562778 RAB3GAP2Q9H2M9 1393 aa28.07■■■□□ 2.08
MAP1LC3B-203ENST00000562778 CCDC144AA2RUR9 1427 aa28.07■■■□□ 2.08
MAP1LC3B-203ENST00000562778 NCOA3Q9Y6Q9 1424 aa28.06■■■□□ 2.08
MAP1LC3B-203ENST00000562778 VGFO15240 615 aaPredicted RBP28.05■■■□□ 2.08
MAP1LC3B-203ENST00000562778 PPLO60437 1756 aa28.05■■■□□ 2.08
MAP1LC3B-203ENST00000562778 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.05■■■□□ 2.08
MAP1LC3B-203ENST00000562778 RPGRIP1LQ68CZ1 1315 aa28.04■■■□□ 2.08
MAP1LC3B-203ENST00000562778 C19orf44Q9H6X5 657 aa28.03■■■□□ 2.08
MAP1LC3B-203ENST00000562778 RGL3Q3MIN7 710 aa28.02■■■□□ 2.08
MAP1LC3B-203ENST00000562778 SETD1AO15047 1707 aaKnown RBP28.01■■■□□ 2.07
MAP1LC3B-203ENST00000562778 SPATA31E1Q6ZUB1 1445 aa28■■■□□ 2.07
MAP1LC3B-203ENST00000562778 ATF3P18847 181 aa27.98■■■□□ 2.07
MAP1LC3B-203ENST00000562778 CADPS2Q86UW7 1296 aa27.97■■■□□ 2.07
MAP1LC3B-203ENST00000562778 ADGRF5Q8IZF2 1346 aa27.96■■■□□ 2.07
MAP1LC3B-203ENST00000562778 ACIN1Q9UKV3 1341 aaKnown RBP27.94■■■□□ 2.06
MAP1LC3B-203ENST00000562778 PHLPP1O60346 1717 aa27.93■■■□□ 2.06
MAP1LC3B-203ENST00000562778 IFT172Q9UG01 1749 aa27.92■■■□□ 2.06
MAP1LC3B-203ENST00000562778 ROBO2Q9HCK4 1378 aa27.9■■■□□ 2.06
MAP1LC3B-203ENST00000562778 PHF23Q9BUL5 403 aaPredicted RBP27.9■■■□□ 2.06
MAP1LC3B-203ENST00000562778 NALCNQ8IZF0 1738 aa27.89■■■□□ 2.06
MAP1LC3B-203ENST00000562778 ADGRL3Q9HAR2 1447 aa27.89■■■□□ 2.06
MAP1LC3B-203ENST00000562778 DCCP43146 1447 aa27.88■■■□□ 2.05
MAP1LC3B-203ENST00000562778 ANKRD30BQ9BXX2 1392 aa27.87■■■□□ 2.05
MAP1LC3B-203ENST00000562778 PTCH1Q13635 1447 aa27.86■■■□□ 2.05
MAP1LC3B-203ENST00000562778 BRINP3Q76B58 766 aa27.86■■■□□ 2.05
MAP1LC3B-203ENST00000562778 COL16A1Q07092 1604 aaPredicted RBP27.85■■■□□ 2.05
MAP1LC3B-203ENST00000562778 MST1RQ04912 1400 aa27.85■■■□□ 2.05
MAP1LC3B-203ENST00000562778 SOCS7O14512 581 aa27.83■■■□□ 2.05
MAP1LC3B-203ENST00000562778 PIK3C2GO75747 1445 aa27.81■■■□□ 2.04
MAP1LC3B-203ENST00000562778 PRAG1Q86YV5 1406 aa27.81■■■□□ 2.04
MAP1LC3B-203ENST00000562778 ASXL1Q8IXJ9 1541 aa27.81■■■□□ 2.04
MAP1LC3B-203ENST00000562778 AHDC1Q5TGY3 1603 aaPredicted RBP27.81■■■□□ 2.04
MAP1LC3B-203ENST00000562778 TMEM132EQ6IEE7 984 aa27.8■■■□□ 2.04
MAP1LC3B-203ENST00000562778 STK26Q9P289 416 aa27.8■■■□□ 2.04
MAP1LC3B-203ENST00000562778 JCADQ9P266 1359 aa27.79■■■□□ 2.04
MAP1LC3B-203ENST00000562778 HRCP23327 699 aa27.78■■■□□ 2.04
MAP1LC3B-203ENST00000562778 RGS17Q9UGC6 210 aaPredicted RBP27.78■■■□□ 2.04
MAP1LC3B-203ENST00000562778 DDX17Q92841 729 aaKnown RBP27.75■■■□□ 2.03
MAP1LC3B-203ENST00000562778 LRPPRCP42704 1394 aaKnown RBP27.73■■■□□ 2.03
MAP1LC3B-203ENST00000562778 NRXN1Q9ULB1 1477 aa27.73■■■□□ 2.03
MAP1LC3B-203ENST00000562778 WAPLQ7Z5K2 1190 aa27.73■■■□□ 2.03
MAP1LC3B-203ENST00000562778 MYOM2P54296 1465 aa27.72■■■□□ 2.03
MAP1LC3B-203ENST00000562778 C1orf167Q5SNV9 1468 aa27.72■■■□□ 2.03
MAP1LC3B-203ENST00000562778 CFAP70Q5T0N1 1121 aa27.72■■■□□ 2.03
MAP1LC3B-203ENST00000562778 NHSL1Q5SYE7 1610 aa27.71■■■□□ 2.03
MAP1LC3B-203ENST00000562778 TECPR2O15040 1411 aa27.71■■■□□ 2.03
MAP1LC3B-203ENST00000562778 C14orf93Q9H972 538 aaKnown RBP27.7■■■□□ 2.02
MAP1LC3B-203ENST00000562778 PLEKHH1Q9ULM0 1364 aa27.7■■■□□ 2.02
MAP1LC3B-203ENST00000562778 YTHDC2Q9H6S0 1430 aaKnown RBP27.69■■■□□ 2.02
MAP1LC3B-203ENST00000562778 ORAI2Q96SN7 254 aa27.69■■■□□ 2.02
MAP1LC3B-203ENST00000562778 ABCC11Q96J66 1382 aa27.69■■■□□ 2.02
MAP1LC3B-203ENST00000562778 LRP6O75581 1613 aa27.68■■■□□ 2.02
MAP1LC3B-203ENST00000562778 KNDC1Q76NI1 1749 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms