RNA–Protein interactions for RNA: ENST00000562664.5

PPP4C-204, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 3

Gene PPP4C, Length 941 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-204ENST00000562664 NKTRP30414 1462 aaKnown RBP36.55■■■■□ 3.44
PPP4C-204ENST00000562664 KCNA6P17658 529 aa36.54■■■■□ 3.44
PPP4C-204ENST00000562664 SLC26A8Q96RN1 970 aa36.54■■■■□ 3.44
PPP4C-204ENST00000562664 TMEM94Q12767 1356 aa36.53■■■■□ 3.44
PPP4C-204ENST00000562664 CHD2O14647 1828 aaKnown RBP36.52■■■■□ 3.44
PPP4C-204ENST00000562664 SENP3Q9H4L4 574 aaPredicted RBP36.5■■■■□ 3.43
PPP4C-204ENST00000562664 PLEKHG1Q9ULL1 1385 aa36.48■■■■□ 3.43
PPP4C-204ENST00000562664 RIMS2Q9UQ26 1411 aa36.48■■■■□ 3.43
PPP4C-204ENST00000562664 ROBO1Q9Y6N7 1651 aa36.46■■■■□ 3.43
PPP4C-204ENST00000562664 FAM135BQ49AJ0 1406 aa36.45■■■■□ 3.43
PPP4C-204ENST00000562664 PROSER2Q86WR7 435 aaPredicted RBP36.41■■■■□ 3.42
PPP4C-204ENST00000562664 RBM33Q96EV2 1170 aaKnown RBP36.37■■■■□ 3.41
PPP4C-204ENST00000562664 DIP2AQ14689 1571 aa36.36■■■■□ 3.41
PPP4C-204ENST00000562664 BCANQ96GW7 911 aa36.36■■■■□ 3.41
PPP4C-204ENST00000562664 PHF23Q9BUL5 403 aaPredicted RBP36.36■■■■□ 3.41
PPP4C-204ENST00000562664 SPHKAPQ2M3C7 1700 aa36.35■■■■□ 3.41
PPP4C-204ENST00000562664 PPP1R15AO75807 674 aaPredicted RBP36.34■■■■□ 3.41
PPP4C-204ENST00000562664 NUP155O75694 1391 aa36.34■■■■□ 3.41
PPP4C-204ENST00000562664 ADAMTS13Q76LX8 1427 aa36.33■■■■□ 3.41
PPP4C-204ENST00000562664 HDGFP51858 240 aaKnown RBP36.32■■■■□ 3.4
PPP4C-204ENST00000562664 ITGAEP38570 1179 aa36.31■■■■□ 3.4
PPP4C-204ENST00000562664 MSH6P52701 1360 aa36.3■■■■□ 3.4
PPP4C-204ENST00000562664 CHGAP10645 457 aaKnown RBP36.3■■■■□ 3.4
PPP4C-204ENST00000562664 PPARGC1BQ86YN6 1023 aaKnown RBP36.29■■■■□ 3.4
PPP4C-204ENST00000562664 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.28■■■■□ 3.4
PPP4C-204ENST00000562664 TBX22Q9Y458 520 aa36.27■■■■□ 3.4
PPP4C-204ENST00000562664 PHLPP1O60346 1717 aa36.24■■■■□ 3.39
PPP4C-204ENST00000562664 NRXN3Q9Y4C0 1643 aa36.22■■■■□ 3.39
PPP4C-204ENST00000562664 TRPM2O94759 1503 aa36.21■■■■□ 3.39
PPP4C-204ENST00000562664 NUTM2DQ5VT03 806 aaPredicted RBP36.21■■■■□ 3.39
PPP4C-204ENST00000562664 PIK3R4Q99570 1358 aa36.21■■■■□ 3.39
PPP4C-204ENST00000562664 NCOA3Q9Y6Q9 1424 aa36.21■■■■□ 3.39
PPP4C-204ENST00000562664 RRBP1Q9P2E9 1410 aaKnown RBP36.2■■■■□ 3.39
PPP4C-204ENST00000562664 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.2■■■■□ 3.38
PPP4C-204ENST00000562664 RGS17Q9UGC6 210 aaPredicted RBP36.16■■■■□ 3.38
PPP4C-204ENST00000562664 SETBP1Q9Y6X0 1596 aa36.15■■■■□ 3.38
PPP4C-204ENST00000562664 SLAIN2Q9P270 581 aa36.15■■■■□ 3.38
PPP4C-204ENST00000562664 CLTCL1P53675 1640 aa36.15■■■■□ 3.38
PPP4C-204ENST00000562664 XRN1Q8IZH2 1706 aaKnown RBP36.14■■■■□ 3.38
PPP4C-204ENST00000562664 COL16A1Q07092 1604 aaPredicted RBP36.14■■■■□ 3.38
PPP4C-204ENST00000562664 PTPRUQ92729 1446 aa36.12■■■■□ 3.37
PPP4C-204ENST00000562664 NAIPQ13075 1403 aa36.09■■■■□ 3.37
PPP4C-204ENST00000562664 KIF1BO60333 1816 aa36.07■■■■□ 3.36
PPP4C-204ENST00000562664 NEXMIFQ5QGS0 1516 aa36.06■■■■□ 3.36
PPP4C-204ENST00000562664 AHDC1Q5TGY3 1603 aaPredicted RBP36.05■■■■□ 3.36
PPP4C-204ENST00000562664 JCADQ9P266 1359 aa36.02■■■■□ 3.36
PPP4C-204ENST00000562664 C14orf37Q86TY3 774 aa36.01■■■■□ 3.36
PPP4C-204ENST00000562664 AMOTL2Q9Y2J4 779 aa36.01■■■■□ 3.36
PPP4C-204ENST00000562664 CADPS2Q86UW7 1296 aa35.99■■■■□ 3.35
PPP4C-204ENST00000562664 C19orf44Q9H6X5 657 aa35.99■■■■□ 3.35
PPP4C-204ENST00000562664 DCCP43146 1447 aa35.97■■■■□ 3.35
PPP4C-204ENST00000562664 SHPRHQ149N8 1683 aa35.97■■■■□ 3.35
PPP4C-204ENST00000562664 ZNF326Q5BKZ1 582 aaKnown RBP35.95■■■■□ 3.35
PPP4C-204ENST00000562664 HFM1A2PYH4 1435 aa35.94■■■■□ 3.34
PPP4C-204ENST00000562664 METP08581 1390 aa35.93■■■■□ 3.34
PPP4C-204ENST00000562664 POTEAQ6S8J7 498 aa35.93■■■■□ 3.34
PPP4C-204ENST00000562664 SETD1AO15047 1707 aaKnown RBP35.93■■■■□ 3.34
PPP4C-204ENST00000562664 ATF3P18847 181 aa35.92■■■■□ 3.34
PPP4C-204ENST00000562664 NALCNQ8IZF0 1738 aa35.91■■■■□ 3.34
PPP4C-204ENST00000562664 LRP6O75581 1613 aa35.9■■■■□ 3.34
PPP4C-204ENST00000562664 NHSL1Q5SYE7 1610 aa35.87■■■■□ 3.33
PPP4C-204ENST00000562664 ASXL1Q8IXJ9 1541 aa35.86■■■■□ 3.33
PPP4C-204ENST00000562664 MST1RQ04912 1400 aa35.85■■■■□ 3.33
PPP4C-204ENST00000562664 BRINP3Q76B58 766 aa35.84■■■■□ 3.33
PPP4C-204ENST00000562664 PPLO60437 1756 aa35.84■■■■□ 3.33
PPP4C-204ENST00000562664 ADGRL3Q9HAR2 1447 aa35.83■■■■□ 3.33
PPP4C-204ENST00000562664 SPATA31A6Q5VVP1 1343 aa35.82■■■■□ 3.32
PPP4C-204ENST00000562664 TRIM52Q96A61 297 aa35.76■■■■□ 3.32
PPP4C-204ENST00000562664 PTCH1Q13635 1447 aa35.74■■■■□ 3.31
PPP4C-204ENST00000562664 PRAG1Q86YV5 1406 aa35.72■■■■□ 3.31
PPP4C-204ENST00000562664 SETD5Q9C0A6 1442 aa35.72■■■■□ 3.31
PPP4C-204ENST00000562664 SLC4A1APQ9BWU0 796 aaKnown RBP35.71■■■■□ 3.31
PPP4C-204ENST00000562664 LAMC1P11047 1609 aa35.68■■■■□ 3.3
PPP4C-204ENST00000562664 VGFO15240 615 aaPredicted RBP35.67■■■■□ 3.3
PPP4C-204ENST00000562664 RPGRIP1LQ68CZ1 1315 aa35.66■■■■□ 3.3
PPP4C-204ENST00000562664 IFT172Q9UG01 1749 aa35.65■■■■□ 3.3
PPP4C-204ENST00000562664 ROBO2Q9HCK4 1378 aa35.64■■■■□ 3.3
PPP4C-204ENST00000562664 MEX3CQ5U5Q3 659 aaKnown RBP35.64■■■■□ 3.3
PPP4C-204ENST00000562664 C1orf167Q5SNV9 1468 aa35.61■■■■□ 3.29
PPP4C-204ENST00000562664 ZNF772Q68DY9 489 aaPredicted RBP35.58■■■■□ 3.29
PPP4C-204ENST00000562664 FOXD1Q16676 465 aa35.56■■■■□ 3.28
PPP4C-204ENST00000562664 DDX17Q92841 729 aaKnown RBP35.55■■■■□ 3.28
PPP4C-204ENST00000562664 PNPLA6Q8IY17 1366 aa35.54■■■■□ 3.28
PPP4C-204ENST00000562664 LRRC59Q96AG4 307 aaKnown RBP35.54■■■■□ 3.28
PPP4C-204ENST00000562664 CCDC144AA2RUR9 1427 aa35.54■■■■□ 3.28
PPP4C-204ENST00000562664 NUTM2BA6NNL0 878 aaPredicted RBP35.53■■■■□ 3.28
PPP4C-204ENST00000562664 NUTM2EB1AL46 878 aaPredicted RBP35.53■■■■□ 3.28
PPP4C-204ENST00000562664 SPATA31E1Q6ZUB1 1445 aa35.53■■■■□ 3.28
PPP4C-204ENST00000562664 NUTM2AQ8IVF1 878 aaPredicted RBP35.53■■■■□ 3.28
PPP4C-204ENST00000562664 CDC42BPGQ6DT37 1551 aa35.51■■■■□ 3.28
PPP4C-204ENST00000562664 KNDC1Q76NI1 1749 aa35.49■■■■□ 3.27
PPP4C-204ENST00000562664 ADGRF5Q8IZF2 1346 aa35.46■■■■□ 3.27
PPP4C-204ENST00000562664 AFF2P51816 1311 aa35.45■■■■□ 3.27
PPP4C-204ENST00000562664 CDK12Q9NYV4 1490 aaPredicted RBP35.45■■■■□ 3.27
PPP4C-204ENST00000562664 MPHOSPH9Q99550 1183 aa35.44■■■■□ 3.26
PPP4C-204ENST00000562664 TECPR2O15040 1411 aa35.43■■■■□ 3.26
PPP4C-204ENST00000562664 ORAI2Q96SN7 254 aa35.43■■■■□ 3.26
PPP4C-204ENST00000562664 SOS2Q07890 1332 aaPredicted RBP35.42■■■■□ 3.26
PPP4C-204ENST00000562664 COL22A1Q8NFW1 1626 aaPredicted RBP35.42■■■■□ 3.26
PPP4C-204ENST00000562664 ANKRD30BQ9BXX2 1392 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms