RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 SLC4A1APQ9BWU0 796 aaKnown RBP31.59■■■□□ 2.65
NR4A1-219ENST00000562373 ZFYVE9O95405 1425 aa31.58■■■□□ 2.65
NR4A1-219ENST00000562373 PPP1R15AO75807 674 aaPredicted RBP31.57■■■□□ 2.64
NR4A1-219ENST00000562373 SPHKAPQ2M3C7 1700 aa31.57■■■□□ 2.64
NR4A1-219ENST00000562373 HDGFP51858 240 aaKnown RBP31.54■■■□□ 2.64
NR4A1-219ENST00000562373 FOXD1Q16676 465 aa31.54■■■□□ 2.64
NR4A1-219ENST00000562373 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.5■■■□□ 2.63
NR4A1-219ENST00000562373 LRRC7Q96NW7 1537 aa31.49■■■□□ 2.63
NR4A1-219ENST00000562373 ZNF326Q5BKZ1 582 aaKnown RBP31.49■■■□□ 2.63
NR4A1-219ENST00000562373 PLEKHG1Q9ULL1 1385 aa31.48■■■□□ 2.63
NR4A1-219ENST00000562373 CLTCL1P53675 1640 aa31.48■■■□□ 2.63
NR4A1-219ENST00000562373 PIP4K2BP78356 416 aa31.46■■■□□ 2.63
NR4A1-219ENST00000562373 KCNA6P17658 529 aa31.45■■■□□ 2.63
NR4A1-219ENST00000562373 RBM33Q96EV2 1170 aaKnown RBP31.45■■■□□ 2.63
NR4A1-219ENST00000562373 MPHOSPH9Q99550 1183 aa31.45■■■□□ 2.63
NR4A1-219ENST00000562373 SETD5Q9C0A6 1442 aa31.45■■■□□ 2.63
NR4A1-219ENST00000562373 SCAF1Q9H7N4 1312 aaKnown RBP31.45■■■□□ 2.62
NR4A1-219ENST00000562373 TRPM2O94759 1503 aa31.44■■■□□ 2.62
NR4A1-219ENST00000562373 TOM1O60784 492 aa31.42■■■□□ 2.62
NR4A1-219ENST00000562373 PROSER2Q86WR7 435 aaPredicted RBP31.38■■■□□ 2.61
NR4A1-219ENST00000562373 TBX22Q9Y458 520 aa31.38■■■□□ 2.61
NR4A1-219ENST00000562373 ADAMTS13Q76LX8 1427 aa31.37■■■□□ 2.61
NR4A1-219ENST00000562373 RAB3GAP2Q9H2M9 1393 aa31.36■■■□□ 2.61
NR4A1-219ENST00000562373 KIF1BO60333 1816 aa31.34■■■□□ 2.61
NR4A1-219ENST00000562373 XIRP1Q702N8 1843 aaKnown RBP31.34■■■□□ 2.61
NR4A1-219ENST00000562373 ALKQ9UM73 1620 aa31.34■■■□□ 2.61
NR4A1-219ENST00000562373 TMEM94Q12767 1356 aa31.33■■■□□ 2.61
NR4A1-219ENST00000562373 CHD2O14647 1828 aaKnown RBP31.28■■■□□ 2.6
NR4A1-219ENST00000562373 NEXMIFQ5QGS0 1516 aa31.28■■■□□ 2.6
NR4A1-219ENST00000562373 NWD1Q149M9 1564 aa31.27■■■□□ 2.6
NR4A1-219ENST00000562373 HSPA1LP34931 641 aa31.26■■■□□ 2.59
NR4A1-219ENST00000562373 RGL3Q3MIN7 710 aa31.24■■■□□ 2.59
NR4A1-219ENST00000562373 NRXN3Q9Y4C0 1643 aa31.24■■■□□ 2.59
NR4A1-219ENST00000562373 AMOTL2Q9Y2J4 779 aa31.23■■■□□ 2.59
NR4A1-219ENST00000562373 PTPRUQ92729 1446 aa31.23■■■□□ 2.59
NR4A1-219ENST00000562373 NKTRP30414 1462 aaKnown RBP31.22■■■□□ 2.59
NR4A1-219ENST00000562373 CCDC144AA2RUR9 1427 aa31.22■■■□□ 2.59
NR4A1-219ENST00000562373 DIP2AQ14689 1571 aa31.21■■■□□ 2.59
NR4A1-219ENST00000562373 ACIN1Q9UKV3 1341 aaKnown RBP31.21■■■□□ 2.59
NR4A1-219ENST00000562373 SETBP1Q9Y6X0 1596 aa31.19■■■□□ 2.58
NR4A1-219ENST00000562373 VGFO15240 615 aaPredicted RBP31.19■■■□□ 2.58
NR4A1-219ENST00000562373 METP08581 1390 aa31.18■■■□□ 2.58
NR4A1-219ENST00000562373 RPGRIP1LQ68CZ1 1315 aa31.18■■■□□ 2.58
NR4A1-219ENST00000562373 PIK3R4Q99570 1358 aa31.17■■■□□ 2.58
NR4A1-219ENST00000562373 C14orf37Q86TY3 774 aa31.13■■■□□ 2.57
NR4A1-219ENST00000562373 MSH6P52701 1360 aa31.12■■■□□ 2.57
NR4A1-219ENST00000562373 SPATA31E1Q6ZUB1 1445 aa31.11■■■□□ 2.57
NR4A1-219ENST00000562373 PPLO60437 1756 aa31.1■■■□□ 2.57
NR4A1-219ENST00000562373 ADGRF5Q8IZF2 1346 aa31.1■■■□□ 2.57
NR4A1-219ENST00000562373 HRCP23327 699 aa31.09■■■□□ 2.57
NR4A1-219ENST00000562373 SLAIN2Q9P270 581 aa31.04■■■□□ 2.56
NR4A1-219ENST00000562373 XRN1Q8IZH2 1706 aaKnown RBP31.03■■■□□ 2.56
NR4A1-219ENST00000562373 NCOA3Q9Y6Q9 1424 aa31.02■■■□□ 2.56
NR4A1-219ENST00000562373 ANKRD30BQ9BXX2 1392 aa31.02■■■□□ 2.56
NR4A1-219ENST00000562373 DISP3Q9P2K9 1392 aa31.02■■■□□ 2.56
NR4A1-219ENST00000562373 FAM135BQ49AJ0 1406 aa31.01■■■□□ 2.55
NR4A1-219ENST00000562373 C19orf44Q9H6X5 657 aa31.01■■■□□ 2.55
NR4A1-219ENST00000562373 SETD1AO15047 1707 aaKnown RBP30.99■■■□□ 2.55
NR4A1-219ENST00000562373 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.98■■■□□ 2.55
NR4A1-219ENST00000562373 ATF3P18847 181 aa30.97■■■□□ 2.55
NR4A1-219ENST00000562373 ROBO1Q9Y6N7 1651 aa30.97■■■□□ 2.55
NR4A1-219ENST00000562373 IFT172Q9UG01 1749 aa30.96■■■□□ 2.55
NR4A1-219ENST00000562373 TMEM132EQ6IEE7 984 aa30.93■■■□□ 2.54
NR4A1-219ENST00000562373 CADPS2Q86UW7 1296 aa30.93■■■□□ 2.54
NR4A1-219ENST00000562373 ROBO2Q9HCK4 1378 aa30.92■■■□□ 2.54
NR4A1-219ENST00000562373 STK26Q9P289 416 aa30.92■■■□□ 2.54
NR4A1-219ENST00000562373 KDM2AQ9Y2K7 1162 aa30.88■■■□□ 2.53
NR4A1-219ENST00000562373 PIK3C2GO75747 1445 aa30.87■■■□□ 2.53
NR4A1-219ENST00000562373 CFAP70Q5T0N1 1121 aa30.86■■■□□ 2.53
NR4A1-219ENST00000562373 ADGRL3Q9HAR2 1447 aa30.83■■■□□ 2.53
NR4A1-219ENST00000562373 ILDR2Q71H61 639 aa30.83■■■□□ 2.53
NR4A1-219ENST00000562373 DCAF11Q8TEB1 546 aa30.83■■■□□ 2.53
NR4A1-219ENST00000562373 C14orf93Q9H972 538 aaKnown RBP30.83■■■□□ 2.53
NR4A1-219ENST00000562373 PTCH1Q13635 1447 aa30.82■■■□□ 2.52
NR4A1-219ENST00000562373 WAPLQ7Z5K2 1190 aa30.82■■■□□ 2.52
NR4A1-219ENST00000562373 NALCNQ8IZF0 1738 aa30.81■■■□□ 2.52
NR4A1-219ENST00000562373 ASXL1Q8IXJ9 1541 aa30.81■■■□□ 2.52
NR4A1-219ENST00000562373 MED1Q15648 1581 aaPredicted RBP30.8■■■□□ 2.52
NR4A1-219ENST00000562373 BRINP3Q76B58 766 aa30.8■■■□□ 2.52
NR4A1-219ENST00000562373 MYOM2P54296 1465 aa30.79■■■□□ 2.52
NR4A1-219ENST00000562373 DCCP43146 1447 aa30.79■■■□□ 2.52
NR4A1-219ENST00000562373 MST1RQ04912 1400 aa30.79■■■□□ 2.52
NR4A1-219ENST00000562373 LRPPRCP42704 1394 aaKnown RBP30.79■■■□□ 2.52
NR4A1-219ENST00000562373 NRXN1Q9ULB1 1477 aa30.78■■■□□ 2.52
NR4A1-219ENST00000562373 PHLPP1O60346 1717 aa30.77■■■□□ 2.52
NR4A1-219ENST00000562373 PRAG1Q86YV5 1406 aa30.75■■■□□ 2.51
NR4A1-219ENST00000562373 DHX57Q6P158 1386 aaKnown RBP30.75■■■□□ 2.51
NR4A1-219ENST00000562373 PLEKHH1Q9ULM0 1364 aa30.75■■■□□ 2.51
NR4A1-219ENST00000562373 YTHDC2Q9H6S0 1430 aaKnown RBP30.74■■■□□ 2.51
NR4A1-219ENST00000562373 ABCC11Q96J66 1382 aa30.74■■■□□ 2.51
NR4A1-219ENST00000562373 DDX17Q92841 729 aaKnown RBP30.73■■■□□ 2.51
NR4A1-219ENST00000562373 TECPR2O15040 1411 aa30.69■■■□□ 2.5
NR4A1-219ENST00000562373 ORAI2Q96SN7 254 aa30.68■■■□□ 2.5
NR4A1-219ENST00000562373 COL16A1Q07092 1604 aaPredicted RBP30.67■■■□□ 2.5
NR4A1-219ENST00000562373 PHF23Q9BUL5 403 aaPredicted RBP30.67■■■□□ 2.5
NR4A1-219ENST00000562373 C1orf167Q5SNV9 1468 aa30.67■■■□□ 2.5
NR4A1-219ENST00000562373 NUTM2FA1L443 756 aa30.66■■■□□ 2.5
NR4A1-219ENST00000562373 TRIM26Q12899 539 aaPredicted RBP30.66■■■□□ 2.5
NR4A1-219ENST00000562373 SIN3AQ96ST3 1273 aa30.66■■■□□ 2.5
NR4A1-219ENST00000562373 SAFB2Q14151 953 aaKnown RBP eCLIP30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms