RNA–Protein interactions for RNA: ENST00000562339.5

LINC01225-202, Transcript of LINC01225 pseudogene, humanhuman

TSL 1 (best) BASIC

Gene LINC01225, Length 2,113 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-202ENST00000562339 TMC1Q8TDI8 760 aa20.25■□□□□ 0.83
LINC01225-202ENST00000562339 MYOM2P54296 1465 aa20.24■□□□□ 0.83
LINC01225-202ENST00000562339 MYBBP1AQ9BQG0 1328 aaKnown RBP20.24■□□□□ 0.83
LINC01225-202ENST00000562339 ARHGAP31Q2M1Z3 1444 aa20.24■□□□□ 0.83
LINC01225-202ENST00000562339 PNISRQ8TF01 805 aaKnown RBP20.24■□□□□ 0.83
LINC01225-202ENST00000562339 IQGAP1P46940 1657 aa20.23■□□□□ 0.83
LINC01225-202ENST00000562339 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
LINC01225-202ENST00000562339 ADGRF5Q8IZF2 1346 aa20.22■□□□□ 0.83
LINC01225-202ENST00000562339 BRD4O60885 1362 aaPredicted RBP20.22■□□□□ 0.83
LINC01225-202ENST00000562339 KIAA1210Q9ULL0 1709 aa20.22■□□□□ 0.83
LINC01225-202ENST00000562339 RPGRIP1LQ68CZ1 1315 aa20.21■□□□□ 0.83
LINC01225-202ENST00000562339 CAMSAP1Q5T5Y3 1602 aa20.21■□□□□ 0.83
LINC01225-202ENST00000562339 ZC3H13Q5T200 1668 aaKnown RBP20.21■□□□□ 0.83
LINC01225-202ENST00000562339 PANK3Q9H999 370 aa20.21■□□□□ 0.83
LINC01225-202ENST00000562339 CFAP70Q5T0N1 1121 aa20.2■□□□□ 0.82
LINC01225-202ENST00000562339 PARD3Q8TEW0 1356 aa20.2■□□□□ 0.82
LINC01225-202ENST00000562339 NOS1P29475 1434 aa20.2■□□□□ 0.82
LINC01225-202ENST00000562339 EIF3AQ14152 1382 aaKnown RBP20.2■□□□□ 0.82
LINC01225-202ENST00000562339 CDCA8Q53HL2 280 aa20.19■□□□□ 0.82
LINC01225-202ENST00000562339 ADGRB3O60242 1522 aa20.18■□□□□ 0.82
LINC01225-202ENST00000562339 KIF13AQ9H1H9 1805 aa20.18■□□□□ 0.82
LINC01225-202ENST00000562339 SLC52A1Q9NWF4 448 aa20.18■□□□□ 0.82
LINC01225-202ENST00000562339 REREQ9P2R6 1566 aa20.18■□□□□ 0.82
LINC01225-202ENST00000562339 CFAP65Q6ZU64 1925 aaKnown RBP20.18■□□□□ 0.82
LINC01225-202ENST00000562339 NRXN1Q9ULB1 1477 aa20.18■□□□□ 0.82
LINC01225-202ENST00000562339 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
LINC01225-202ENST00000562339 NLRP13Q86W25 1043 aa20.17■□□□□ 0.82
LINC01225-202ENST00000562339 AGLP35573 1532 aa20.16■□□□□ 0.82
LINC01225-202ENST00000562339 IFT172Q9UG01 1749 aa20.16■□□□□ 0.82
LINC01225-202ENST00000562339 MROH2AA6NES4 1674 aa20.15■□□□□ 0.82
LINC01225-202ENST00000562339 BCANQ96GW7 911 aa20.15■□□□□ 0.82
LINC01225-202ENST00000562339 LRPPRCP42704 1394 aaKnown RBP20.15■□□□□ 0.82
LINC01225-202ENST00000562339 CC2D1BQ5T0F9 858 aaKnown RBP20.12■□□□□ 0.81
LINC01225-202ENST00000562339 VGFO15240 615 aaPredicted RBP20.11■□□□□ 0.81
LINC01225-202ENST00000562339 IDI1Q13907 227 aa20.11■□□□□ 0.81
LINC01225-202ENST00000562339 C14orf93Q9H972 538 aaKnown RBP20.09■□□□□ 0.81
LINC01225-202ENST00000562339 PIK3C2GO75747 1445 aa20.08■□□□□ 0.81
LINC01225-202ENST00000562339 SIGLEC1Q9BZZ2 1709 aa20.08■□□□□ 0.81
LINC01225-202ENST00000562339 SYNMO15061 1565 aa20.08■□□□□ 0.8
LINC01225-202ENST00000562339 PIK3C2BO00750 1634 aa20.08■□□□□ 0.8
LINC01225-202ENST00000562339 ESF1Q9H501 851 aaKnown RBP20.08■□□□□ 0.8
LINC01225-202ENST00000562339 KNSTRNQ9Y448 316 aa20.08■□□□□ 0.8
LINC01225-202ENST00000562339 SETBP1Q9Y6X0 1596 aa20.06■□□□□ 0.8
LINC01225-202ENST00000562339 PPLO60437 1756 aa20.05■□□□□ 0.8
LINC01225-202ENST00000562339 SMG6Q86US8 1419 aaKnown RBP20.05■□□□□ 0.8
LINC01225-202ENST00000562339 ARHGEF40Q8TER5 1519 aa20.05■□□□□ 0.8
LINC01225-202ENST00000562339 MLECQ14165 292 aa20.05■□□□□ 0.8
LINC01225-202ENST00000562339 SBNO2Q9Y2G9 1366 aa20.04■□□□□ 0.8
LINC01225-202ENST00000562339 AMER1Q5JTC6 1135 aaPredicted RBP20.03■□□□□ 0.8
LINC01225-202ENST00000562339 ERICH6BQ5W0A0 696 aa20.03■□□□□ 0.8
LINC01225-202ENST00000562339 FBXO31Q5XUX0 539 aaPredicted RBP20.03■□□□□ 0.8
LINC01225-202ENST00000562339 PREX1Q8TCU6 1659 aa20.03■□□□□ 0.8
LINC01225-202ENST00000562339 ERVK-7P63135 1459 aa20.02■□□□□ 0.8
LINC01225-202ENST00000562339 STAG3Q9UJ98 1225 aa20.02■□□□□ 0.8
LINC01225-202ENST00000562339 NUDCQ9Y266 331 aa20.02■□□□□ 0.79
LINC01225-202ENST00000562339 CENPJQ9HC77 1338 aaPredicted RBP20.01■□□□□ 0.79
LINC01225-202ENST00000562339 MYO3AQ8NEV4 1616 aa20■□□□□ 0.79
LINC01225-202ENST00000562339 ADGRB1O14514 1584 aa20■□□□□ 0.79
LINC01225-202ENST00000562339 KDM5AP29375 1690 aaKnown RBP20■□□□□ 0.79
LINC01225-202ENST00000562339 IRX6P78412 446 aaPredicted RBP20■□□□□ 0.79
LINC01225-202ENST00000562339 TRAK1Q9UPV9 953 aa20■□□□□ 0.79
LINC01225-202ENST00000562339 ZFYVE9O95405 1425 aa20■□□□□ 0.79
LINC01225-202ENST00000562339 NPC1L1Q9UHC9 1359 aa19.99■□□□□ 0.79
LINC01225-202ENST00000562339 TMEM132EQ6IEE7 984 aa19.99■□□□□ 0.79
LINC01225-202ENST00000562339 INSRP06213 1382 aa19.98■□□□□ 0.79
LINC01225-202ENST00000562339 MYOM1P52179 1685 aa19.98■□□□□ 0.79
LINC01225-202ENST00000562339 NEXMIFQ5QGS0 1516 aa19.98■□□□□ 0.79
LINC01225-202ENST00000562339 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
LINC01225-202ENST00000562339 NUTM2DQ5VT03 806 aaPredicted RBP19.97■□□□□ 0.79
LINC01225-202ENST00000562339 CLTCQ00610 1675 aaKnown RBP19.97■□□□□ 0.79
LINC01225-202ENST00000562339 SENP3-EIF4A1A0A087X0R7 540 aa19.96■□□□□ 0.79
LINC01225-202ENST00000562339 PPP2R1AP30153 589 aa19.96■□□□□ 0.79
LINC01225-202ENST00000562339 TRHP20396 242 aaPredicted RBP19.94■□□□□ 0.78
LINC01225-202ENST00000562339 TMEM131LA2VDJ0 1609 aa19.94■□□□□ 0.78
LINC01225-202ENST00000562339 ZMYM3Q14202 1370 aa19.93■□□□□ 0.78
LINC01225-202ENST00000562339 SPATA31D1Q6ZQQ2 1576 aa19.91■□□□□ 0.78
LINC01225-202ENST00000562339 CARD14Q9BXL6 1004 aa19.91■□□□□ 0.78
LINC01225-202ENST00000562339 RNF123Q5XPI4 1314 aa19.91■□□□□ 0.78
LINC01225-202ENST00000562339 PDE3BQ13370 1112 aa19.9■□□□□ 0.78
LINC01225-202ENST00000562339 TSHZ2Q9NRE2 1034 aa19.9■□□□□ 0.78
LINC01225-202ENST00000562339 PPP4R2Q9NY27 417 aa19.9■□□□□ 0.78
LINC01225-202ENST00000562339 BLMP54132 1417 aaPredicted RBP19.9■□□□□ 0.78
LINC01225-202ENST00000562339 PUS7Q96PZ0 661 aaKnown RBP19.87■□□□□ 0.77
LINC01225-202ENST00000562339 ADAMTS8Q9UP79 889 aa19.87■□□□□ 0.77
LINC01225-202ENST00000562339 QRICH2Q9H0J4 1663 aa19.87■□□□□ 0.77
LINC01225-202ENST00000562339 HDGFP51858 240 aaKnown RBP19.87■□□□□ 0.77
LINC01225-202ENST00000562339 SALL2Q9Y467 1007 aaPredicted RBP19.87■□□□□ 0.77
LINC01225-202ENST00000562339 MYO5BQ9ULV0 1848 aa19.86■□□□□ 0.77
LINC01225-202ENST00000562339 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.85■□□□□ 0.77
LINC01225-202ENST00000562339 A2ML1A8K2U0 1454 aa19.84■□□□□ 0.77
LINC01225-202ENST00000562339 WDR43Q15061 677 aaKnown RBP eCLIP19.84■□□□□ 0.77
LINC01225-202ENST00000562339 SLC12A5Q9H2X9 1139 aa19.84■□□□□ 0.77
LINC01225-202ENST00000562339 EVC2Q86UK5 1308 aa19.84■□□□□ 0.77
LINC01225-202ENST00000562339 TNRQ92752 1358 aa19.82■□□□□ 0.76
LINC01225-202ENST00000562339 RIMS2Q9UQ26 1411 aa19.81■□□□□ 0.76
LINC01225-202ENST00000562339 STK26Q9P289 416 aa19.81■□□□□ 0.76
LINC01225-202ENST00000562339 ARHGEF28Q8N1W1 1705 aaKnown RBP19.81■□□□□ 0.76
LINC01225-202ENST00000562339 NSD3Q9BZ95 1437 aa19.79■□□□□ 0.76
LINC01225-202ENST00000562339 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
LINC01225-202ENST00000562339 CDCA7LQ96GN5 454 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms