RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 BCANQ96GW7 911 aa31.63■■■□□ 2.65
PDXDC1-207ENST00000562119 PHLPP1O60346 1717 aa31.63■■■□□ 2.65
PDXDC1-207ENST00000562119 ANKRD30AQ9BXX3 1397 aa31.62■■■□□ 2.65
PDXDC1-207ENST00000562119 SLC52A1Q9NWF4 448 aa31.61■■■□□ 2.65
PDXDC1-207ENST00000562119 FGD6Q6ZV73 1430 aa31.58■■■□□ 2.65
PDXDC1-207ENST00000562119 ZFYVE9O95405 1425 aa31.58■■■□□ 2.65
PDXDC1-207ENST00000562119 COL16A1Q07092 1604 aaPredicted RBP31.56■■■□□ 2.64
PDXDC1-207ENST00000562119 PLEKHG1Q9ULL1 1385 aa31.56■■■□□ 2.64
PDXDC1-207ENST00000562119 LRP6O75581 1613 aa31.53■■■□□ 2.64
PDXDC1-207ENST00000562119 CHD2O14647 1828 aaKnown RBP31.52■■■□□ 2.64
PDXDC1-207ENST00000562119 RIMS2Q9UQ26 1411 aa31.5■■■□□ 2.63
PDXDC1-207ENST00000562119 RPRD2Q5VT52 1461 aaKnown RBP31.49■■■□□ 2.63
PDXDC1-207ENST00000562119 PPP1R15AO75807 674 aaPredicted RBP31.48■■■□□ 2.63
PDXDC1-207ENST00000562119 SPATA31A6Q5VVP1 1343 aa31.48■■■□□ 2.63
PDXDC1-207ENST00000562119 TBX22Q9Y458 520 aa31.46■■■□□ 2.63
PDXDC1-207ENST00000562119 NCOA3Q9Y6Q9 1424 aa31.46■■■□□ 2.63
PDXDC1-207ENST00000562119 ADGRL2O95490 1459 aa31.46■■■□□ 2.63
PDXDC1-207ENST00000562119 MYO5BQ9ULV0 1848 aa31.45■■■□□ 2.63
PDXDC1-207ENST00000562119 UPF1Q92900 1129 aaKnown RBP eCLIP31.45■■■□□ 2.63
PDXDC1-207ENST00000562119 TMEM131LA2VDJ0 1609 aa31.44■■■□□ 2.62
PDXDC1-207ENST00000562119 APLP2Q06481 763 aa31.43■■■□□ 2.62
PDXDC1-207ENST00000562119 GCC2Q8IWJ2 1684 aa31.43■■■□□ 2.62
PDXDC1-207ENST00000562119 HDGFP51858 240 aaKnown RBP31.42■■■□□ 2.62
PDXDC1-207ENST00000562119 MEX3CQ5U5Q3 659 aaKnown RBP31.42■■■□□ 2.62
PDXDC1-207ENST00000562119 ZNF772Q68DY9 489 aaPredicted RBP31.42■■■□□ 2.62
PDXDC1-207ENST00000562119 C14orf37Q86TY3 774 aa31.42■■■□□ 2.62
PDXDC1-207ENST00000562119 TRIM52Q96A61 297 aa31.42■■■□□ 2.62
PDXDC1-207ENST00000562119 ADAMTS13Q76LX8 1427 aa31.41■■■□□ 2.62
PDXDC1-207ENST00000562119 AHDC1Q5TGY3 1603 aaPredicted RBP31.4■■■□□ 2.62
PDXDC1-207ENST00000562119 ANKRD50Q9ULJ7 1429 aa31.4■■■□□ 2.62
PDXDC1-207ENST00000562119 NUTM2DQ5VT03 806 aaPredicted RBP31.38■■■□□ 2.61
PDXDC1-207ENST00000562119 CADPS2Q86UW7 1296 aa31.38■■■□□ 2.61
PDXDC1-207ENST00000562119 C19orf44Q9H6X5 657 aa31.38■■■□□ 2.61
PDXDC1-207ENST00000562119 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.37■■■□□ 2.61
PDXDC1-207ENST00000562119 SHPRHQ149N8 1683 aa31.35■■■□□ 2.61
PDXDC1-207ENST00000562119 ATF3P18847 181 aa31.35■■■□□ 2.61
PDXDC1-207ENST00000562119 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.35■■■□□ 2.61
PDXDC1-207ENST00000562119 CHGAP10645 457 aaKnown RBP31.34■■■□□ 2.61
PDXDC1-207ENST00000562119 PIK3R4Q99570 1358 aa31.31■■■□□ 2.6
PDXDC1-207ENST00000562119 DIP2AQ14689 1571 aa31.3■■■□□ 2.6
PDXDC1-207ENST00000562119 RXRBP28702 533 aa31.3■■■□□ 2.6
PDXDC1-207ENST00000562119 BRINP3Q76B58 766 aa31.3■■■□□ 2.6
PDXDC1-207ENST00000562119 FAM50AQ14320 339 aaKnown RBP31.29■■■□□ 2.6
PDXDC1-207ENST00000562119 PTPRUQ92729 1446 aa31.27■■■□□ 2.6
PDXDC1-207ENST00000562119 NUTM2BA6NNL0 878 aaPredicted RBP31.27■■■□□ 2.6
PDXDC1-207ENST00000562119 NUTM2EB1AL46 878 aaPredicted RBP31.27■■■□□ 2.6
PDXDC1-207ENST00000562119 NUTM2AQ8IVF1 878 aaPredicted RBP31.27■■■□□ 2.6
PDXDC1-207ENST00000562119 AMOTL2Q9Y2J4 779 aa31.26■■■□□ 2.59
PDXDC1-207ENST00000562119 UNC13BO14795 1591 aa31.23■■■□□ 2.59
PDXDC1-207ENST00000562119 CDK12Q9NYV4 1490 aaPredicted RBP31.23■■■□□ 2.59
PDXDC1-207ENST00000562119 E9PCH4 1651 aa31.22■■■□□ 2.59
PDXDC1-207ENST00000562119 TRPM2O94759 1503 aa31.22■■■□□ 2.59
PDXDC1-207ENST00000562119 AFF2P51816 1311 aa31.21■■■□□ 2.59
PDXDC1-207ENST00000562119 ASXL1Q8IXJ9 1541 aa31.19■■■□□ 2.58
PDXDC1-207ENST00000562119 SRCAPQ6ZRS2 3230 aa31.19■■■□□ 2.58
PDXDC1-207ENST00000562119 DCCP43146 1447 aa31.18■■■□□ 2.58
PDXDC1-207ENST00000562119 SETD5Q9C0A6 1442 aa31.18■■■□□ 2.58
PDXDC1-207ENST00000562119 MST1RQ04912 1400 aa31.15■■■□□ 2.58
PDXDC1-207ENST00000562119 XRN1Q8IZH2 1706 aaKnown RBP31.12■■■□□ 2.57
PDXDC1-207ENST00000562119 IQGAP3Q86VI3 1631 aa31.11■■■□□ 2.57
PDXDC1-207ENST00000562119 NHSL1Q5SYE7 1610 aa31.1■■■□□ 2.57
PDXDC1-207ENST00000562119 NRXN3Q9Y4C0 1643 aa31.1■■■□□ 2.57
PDXDC1-207ENST00000562119 RGS12O14924 1447 aa31.1■■■□□ 2.57
PDXDC1-207ENST00000562119 DDX17Q92841 729 aaKnown RBP31.09■■■□□ 2.57
PDXDC1-207ENST00000562119 LRRC59Q96AG4 307 aaKnown RBP31.09■■■□□ 2.57
PDXDC1-207ENST00000562119 C8orf37Q96NL8 207 aa31.08■■■□□ 2.57
PDXDC1-207ENST00000562119 QTRT2Q9H974 415 aaKnown RBP31.07■■■□□ 2.56
PDXDC1-207ENST00000562119 METP08581 1390 aa31.06■■■□□ 2.56
PDXDC1-207ENST00000562119 SETBP1Q9Y6X0 1596 aa31.06■■■□□ 2.56
PDXDC1-207ENST00000562119 PNPLA6Q8IY17 1366 aa31.05■■■□□ 2.56
PDXDC1-207ENST00000562119 RBM6P78332 1123 aaKnown RBP31.05■■■□□ 2.56
PDXDC1-207ENST00000562119 NUP155O75694 1391 aa31.05■■■□□ 2.56
PDXDC1-207ENST00000562119 ROCK1Q13464 1354 aa31.05■■■□□ 2.56
PDXDC1-207ENST00000562119 ADGRL3Q9HAR2 1447 aa31■■■□□ 2.55
PDXDC1-207ENST00000562119 ADAMTS2O95450 1211 aa30.95■■■□□ 2.55
PDXDC1-207ENST00000562119 ZNF326Q5BKZ1 582 aaKnown RBP30.95■■■□□ 2.55
PDXDC1-207ENST00000562119 NGLY1Q96IV0 654 aa30.94■■■□□ 2.54
PDXDC1-207ENST00000562119 NALCNQ8IZF0 1738 aa30.93■■■□□ 2.54
PDXDC1-207ENST00000562119 C1orf167Q5SNV9 1468 aa30.91■■■□□ 2.54
PDXDC1-207ENST00000562119 SPHKAPQ2M3C7 1700 aa30.89■■■□□ 2.54
PDXDC1-207ENST00000562119 SOS2Q07890 1332 aaPredicted RBP30.86■■■□□ 2.53
PDXDC1-207ENST00000562119 ATAD2Q6PL18 1390 aa30.86■■■□□ 2.53
PDXDC1-207ENST00000562119 NEXMIFQ5QGS0 1516 aa30.86■■■□□ 2.53
PDXDC1-207ENST00000562119 LAMC1P11047 1609 aa30.85■■■□□ 2.53
PDXDC1-207ENST00000562119 ITGAEP38570 1179 aa30.85■■■□□ 2.53
PDXDC1-207ENST00000562119 ORAI2Q96SN7 254 aa30.85■■■□□ 2.53
PDXDC1-207ENST00000562119 USP21Q9UK80 565 aa30.84■■■□□ 2.53
PDXDC1-207ENST00000562119 EP400Q96L91 3159 aa30.82■■■□□ 2.52
PDXDC1-207ENST00000562119 CLTCL1P53675 1640 aa30.8■■■□□ 2.52
PDXDC1-207ENST00000562119 FNBP4Q8N3X1 1017 aaPredicted RBP30.8■■■□□ 2.52
PDXDC1-207ENST00000562119 TRPC5Q9UL62 973 aaPredicted RBP30.8■■■□□ 2.52
PDXDC1-207ENST00000562119 ROBO2Q9HCK4 1378 aa30.79■■■□□ 2.52
PDXDC1-207ENST00000562119 PTCH1Q13635 1447 aa30.79■■■□□ 2.52
PDXDC1-207ENST00000562119 ATRNO75882 1429 aa30.76■■■□□ 2.51
PDXDC1-207ENST00000562119 ZRANB1Q9UGI0 708 aa30.71■■■□□ 2.51
PDXDC1-207ENST00000562119 COL22A1Q8NFW1 1626 aaPredicted RBP30.71■■■□□ 2.51
PDXDC1-207ENST00000562119 PRAG1Q86YV5 1406 aa30.69■■■□□ 2.5
PDXDC1-207ENST00000562119 MYOM2P54296 1465 aa30.69■■■□□ 2.5
PDXDC1-207ENST00000562119 BCL9LQ86UU0 1499 aa30.68■■■□□ 2.5
PDXDC1-207ENST00000562119 VGFO15240 615 aaPredicted RBP30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms