RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 POTEGQ6S5H5 508 aa12.03□□□□□ -0.48
DENND4A-204ENST00000562028 IL27Q8NEV9 243 aa12.03□□□□□ -0.48
DENND4A-204ENST00000562028 SULF1Q8IWU6 871 aa12.02□□□□□ -0.49
DENND4A-204ENST00000562028 POTEMA6NI47 508 aa12.01□□□□□ -0.49
DENND4A-204ENST00000562028 HDGFP51858 240 aaKnown RBP12.01□□□□□ -0.49
DENND4A-204ENST00000562028 MRPL50Q8N5N7 158 aaKnown RBP12.01□□□□□ -0.49
DENND4A-204ENST00000562028 KRTAP3-3Q9BYR6 98 aa12.01□□□□□ -0.49
DENND4A-204ENST00000562028 KRTAP3-2Q9BYR7 98 aa12.01□□□□□ -0.49
DENND4A-204ENST00000562028 PLEKHG3A1L390 1219 aa11.99□□□□□ -0.49
DENND4A-204ENST00000562028 SWT1Q5T5J6 900 aaKnown RBP11.98□□□□□ -0.49
DENND4A-204ENST00000562028 ZFRQ96KR1 1074 aaKnown RBP11.98□□□□□ -0.49
DENND4A-204ENST00000562028 STAC3Q96MF2 364 aa11.98□□□□□ -0.49
DENND4A-204ENST00000562028 BEGAINQ9BUH8 593 aa11.97□□□□□ -0.49
DENND4A-204ENST00000562028 DDX11L8A8MPP1 907 aa11.96□□□□□ -0.49
DENND4A-204ENST00000562028 CD46P15529 392 aa11.96□□□□□ -0.49
DENND4A-204ENST00000562028 CDAN1Q8IWY9 1227 aa11.96□□□□□ -0.49
DENND4A-204ENST00000562028 SLC4A3P48751 1232 aa11.95□□□□□ -0.5
DENND4A-204ENST00000562028 RSPH4AQ5TD94 716 aa11.95□□□□□ -0.5
DENND4A-204ENST00000562028 SAMD7Q7Z3H4 446 aa11.95□□□□□ -0.5
DENND4A-204ENST00000562028 SLF2Q8IX21 1173 aa11.93□□□□□ -0.5
DENND4A-204ENST00000562028 GOPCQ9HD26 462 aa11.92□□□□□ -0.5
DENND4A-204ENST00000562028 GOLGA8CPA6NN73 597 aa11.91□□□□□ -0.5
DENND4A-204ENST00000562028 DIXDC1Q155Q3 683 aa11.91□□□□□ -0.5
DENND4A-204ENST00000562028 RDH13Q8NBN7 331 aa11.91□□□□□ -0.5
DENND4A-204ENST00000562028 RSPH6AQ9H0K4 717 aa11.91□□□□□ -0.5
DENND4A-204ENST00000562028 SLC10A3P09131 477 aa11.89□□□□□ -0.51
DENND4A-204ENST00000562028 ANKK1Q8NFD2 765 aa11.89□□□□□ -0.51
DENND4A-204ENST00000562028 LRCH3Q96II8 777 aa11.89□□□□□ -0.51
DENND4A-204ENST00000562028 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
DENND4A-204ENST00000562028 NECTIN2Q92692 538 aa11.88□□□□□ -0.51
DENND4A-204ENST00000562028 GCGRP47871 477 aa11.87□□□□□ -0.51
DENND4A-204ENST00000562028 SH3D19Q5HYK7 790 aa11.87□□□□□ -0.51
DENND4A-204ENST00000562028 TBC1D2Q9BYX2 928 aa11.86□□□□□ -0.51
DENND4A-204ENST00000562028 SOWAHBA6NEL2 793 aa11.85□□□□□ -0.51
DENND4A-204ENST00000562028 NUTM1Q86Y26 1132 aa11.85□□□□□ -0.51
DENND4A-204ENST00000562028 SPIRE2Q8WWL2 714 aa11.85□□□□□ -0.51
DENND4A-204ENST00000562028 WNT2BQ93097 391 aa11.85□□□□□ -0.51
DENND4A-204ENST00000562028 RNF40O75150 1001 aa11.84□□□□□ -0.51
DENND4A-204ENST00000562028 SKIV2LQ15477 1246 aaKnown RBP11.84□□□□□ -0.51
DENND4A-204ENST00000562028 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
DENND4A-204ENST00000562028 KDM4AO75164 1064 aa11.83□□□□□ -0.52
DENND4A-204ENST00000562028 MYSM1Q5VVJ2 828 aa11.83□□□□□ -0.52
DENND4A-204ENST00000562028 USP46P62068 366 aa11.82□□□□□ -0.52
DENND4A-204ENST00000562028 PCMTD1Q96MG8 357 aaPredicted RBP11.82□□□□□ -0.52
DENND4A-204ENST00000562028 GTF3C3Q9Y5Q9 886 aa11.82□□□□□ -0.52
DENND4A-204ENST00000562028 CFHP08603 1231 aa11.8□□□□□ -0.52
DENND4A-204ENST00000562028 BCAMP50895 628 aa11.8□□□□□ -0.52
DENND4A-204ENST00000562028 TSR3Q9UJK0 312 aaKnown RBP11.8□□□□□ -0.52
DENND4A-204ENST00000562028 PPP4CP60510 307 aa11.79□□□□□ -0.52
DENND4A-204ENST00000562028 KMT5BQ4FZB7 885 aa11.79□□□□□ -0.52
DENND4A-204ENST00000562028 HPS5Q9UPZ3 1129 aa11.79□□□□□ -0.52
DENND4A-204ENST00000562028 GJA5P36382 358 aa11.78□□□□□ -0.52
DENND4A-204ENST00000562028 CLK2P49760 499 aaKnown RBP11.78□□□□□ -0.52
DENND4A-204ENST00000562028 PRR14Q9BWN1 585 aa11.78□□□□□ -0.52
DENND4A-204ENST00000562028 POLR3EQ9NVU0 708 aa11.78□□□□□ -0.52
DENND4A-204ENST00000562028 THSD4Q6ZMP0 1018 aa11.77□□□□□ -0.53
DENND4A-204ENST00000562028 RIC3Q7Z5B4 369 aa11.77□□□□□ -0.53
DENND4A-204ENST00000562028 MOXD2PA6NHM9 499 aa11.76□□□□□ -0.53
DENND4A-204ENST00000562028 SPTLC1O15269 473 aa11.76□□□□□ -0.53
DENND4A-204ENST00000562028 HOXA2O43364 376 aa11.76□□□□□ -0.53
DENND4A-204ENST00000562028 TUSC1Q2TAM9 212 aa11.76□□□□□ -0.53
DENND4A-204ENST00000562028 GRIPAP1Q4V328 841 aa11.76□□□□□ -0.53
DENND4A-204ENST00000562028 ACTN4O43707 911 aaKnown RBP11.75□□□□□ -0.53
DENND4A-204ENST00000562028 RSBN1LQ6PCB5 846 aaPredicted RBP11.75□□□□□ -0.53
DENND4A-204ENST00000562028 KCTD12Q96CX2 325 aaKnown RBP11.75□□□□□ -0.53
DENND4A-204ENST00000562028 ATP6V1AP38606 617 aa11.74□□□□□ -0.53
DENND4A-204ENST00000562028 FUT2Q10981 343 aa11.74□□□□□ -0.53
DENND4A-204ENST00000562028 PROCA1Q8NCQ7 364 aaPredicted RBP11.74□□□□□ -0.53
DENND4A-204ENST00000562028 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
DENND4A-204ENST00000562028 LIMD1Q9UGP4 676 aa11.74□□□□□ -0.53
DENND4A-204ENST00000562028 NDUFV2P19404 249 aa11.73□□□□□ -0.53
DENND4A-204ENST00000562028 WBP1LQ9NX94 342 aa11.72□□□□□ -0.53
DENND4A-204ENST00000562028 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
DENND4A-204ENST00000562028 ATP1B4Q9UN42 357 aaPredicted RBP11.72□□□□□ -0.53
DENND4A-204ENST00000562028 FDX1P10109 184 aa11.7□□□□□ -0.54
DENND4A-204ENST00000562028 APLP1P51693 650 aa11.7□□□□□ -0.54
DENND4A-204ENST00000562028 NYAP1Q6ZVC0 841 aa11.7□□□□□ -0.54
DENND4A-204ENST00000562028 MORN1Q5T089 497 aa11.67□□□□□ -0.54
DENND4A-204ENST00000562028 PRPF38BQ5VTL8 546 aaKnown RBP11.67□□□□□ -0.54
DENND4A-204ENST00000562028 HLA-CQ95604 372 aa11.67□□□□□ -0.54
DENND4A-204ENST00000562028 PCDHB15Q9Y5E8 787 aa11.67□□□□□ -0.54
DENND4A-204ENST00000562028 PPP2R2DQ66LE6 453 aa11.66□□□□□ -0.54
DENND4A-204ENST00000562028 PCDHGC3Q9UN70 934 aa11.66□□□□□ -0.54
DENND4A-204ENST00000562028 LILRB3O75022 631 aa11.65□□□□□ -0.54
DENND4A-204ENST00000562028 GUCA2AQ02747 115 aa11.65□□□□□ -0.54
DENND4A-204ENST00000562028 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
DENND4A-204ENST00000562028 PCDHB3Q9Y5E6 796 aa11.65□□□□□ -0.54
DENND4A-204ENST00000562028 CSPP1Q1MSJ5 1256 aa11.64□□□□□ -0.55
DENND4A-204ENST00000562028 PUS10Q3MIT2 529 aaKnown RBP11.64□□□□□ -0.55
DENND4A-204ENST00000562028 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
DENND4A-204ENST00000562028 PTPN5P54829 565 aa11.63□□□□□ -0.55
DENND4A-204ENST00000562028 QPCTQ16769 361 aa11.63□□□□□ -0.55
DENND4A-204ENST00000562028 SLC27A5Q9Y2P5 690 aa11.63□□□□□ -0.55
DENND4A-204ENST00000562028 HRCP23327 699 aa11.62□□□□□ -0.55
DENND4A-204ENST00000562028 SPDYE5A6NIY4 337 aa11.61□□□□□ -0.55
DENND4A-204ENST00000562028 NUTM2BA6NNL0 878 aaPredicted RBP11.61□□□□□ -0.55
DENND4A-204ENST00000562028 NUTM2EB1AL46 878 aaPredicted RBP11.61□□□□□ -0.55
DENND4A-204ENST00000562028 NR1I2O75469 434 aa11.61□□□□□ -0.55
DENND4A-204ENST00000562028 RFC5P40937 340 aa11.61□□□□□ -0.55
DENND4A-204ENST00000562028 MTMR2Q13614 643 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms