RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 NPHP4O75161 1426 aaPredicted RBP20.51■□□□□ 0.87
IFT140-205ENST00000561954 NCKAP5LQ9HCH0 1330 aa20.51■□□□□ 0.87
IFT140-205ENST00000561954 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.5■□□□□ 0.87
IFT140-205ENST00000561954 PPP1R15AO75807 674 aaPredicted RBP20.48■□□□□ 0.87
IFT140-205ENST00000561954 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
IFT140-205ENST00000561954 TXNDC2Q86VQ3 553 aa20.48■□□□□ 0.87
IFT140-205ENST00000561954 NEXMIFQ5QGS0 1516 aa20.48■□□□□ 0.87
IFT140-205ENST00000561954 DHX57Q6P158 1386 aaKnown RBP20.47■□□□□ 0.87
IFT140-205ENST00000561954 SPATA31E1Q6ZUB1 1445 aa20.47■□□□□ 0.87
IFT140-205ENST00000561954 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
IFT140-205ENST00000561954 RPGRIP1LQ68CZ1 1315 aa20.45■□□□□ 0.86
IFT140-205ENST00000561954 LTKP29376 864 aa20.44■□□□□ 0.86
IFT140-205ENST00000561954 DIP2AQ14689 1571 aa20.43■□□□□ 0.86
IFT140-205ENST00000561954 PPLO60437 1756 aa20.41■□□□□ 0.86
IFT140-205ENST00000561954 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
IFT140-205ENST00000561954 IFT172Q9UG01 1749 aa20.39■□□□□ 0.86
IFT140-205ENST00000561954 MYOM2P54296 1465 aa20.37■□□□□ 0.85
IFT140-205ENST00000561954 VGFO15240 615 aaPredicted RBP20.37■□□□□ 0.85
IFT140-205ENST00000561954 BCANQ96GW7 911 aa20.36■□□□□ 0.85
IFT140-205ENST00000561954 RGL3Q3MIN7 710 aa20.34■□□□□ 0.85
IFT140-205ENST00000561954 NRXN3Q9Y4C0 1643 aa20.34■□□□□ 0.85
IFT140-205ENST00000561954 NUTM2DQ5VT03 806 aaPredicted RBP20.33■□□□□ 0.85
IFT140-205ENST00000561954 CPS1P31327 1500 aa20.32■□□□□ 0.84
IFT140-205ENST00000561954 ADAMTS13Q76LX8 1427 aa20.32■□□□□ 0.84
IFT140-205ENST00000561954 NWD1Q149M9 1564 aa20.31■□□□□ 0.84
IFT140-205ENST00000561954 STAC3Q96MF2 364 aa20.31■□□□□ 0.84
IFT140-205ENST00000561954 PIK3R4Q99570 1358 aa20.31■□□□□ 0.84
IFT140-205ENST00000561954 NRXN1Q9ULB1 1477 aa20.3■□□□□ 0.84
IFT140-205ENST00000561954 PIK3C2GO75747 1445 aa20.3■□□□□ 0.84
IFT140-205ENST00000561954 LAMC1P11047 1609 aa20.3■□□□□ 0.84
IFT140-205ENST00000561954 CLSPNQ9HAW4 1339 aa20.29■□□□□ 0.84
IFT140-205ENST00000561954 LTBP4Q8N2S1 1624 aa20.29■□□□□ 0.84
IFT140-205ENST00000561954 SLC26A8Q96RN1 970 aa20.29■□□□□ 0.84
IFT140-205ENST00000561954 TBX22Q9Y458 520 aa20.29■□□□□ 0.84
IFT140-205ENST00000561954 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
IFT140-205ENST00000561954 ZNF335Q9H4Z2 1342 aaPredicted RBP20.28■□□□□ 0.84
IFT140-205ENST00000561954 IQSEC2Q5JU85 1478 aa20.25■□□□□ 0.83
IFT140-205ENST00000561954 ALKQ9UM73 1620 aa20.25■□□□□ 0.83
IFT140-205ENST00000561954 ADGRF5Q8IZF2 1346 aa20.25■□□□□ 0.83
IFT140-205ENST00000561954 SETD1AO15047 1707 aaKnown RBP20.24■□□□□ 0.83
IFT140-205ENST00000561954 DCAF11Q8TEB1 546 aa20.23■□□□□ 0.83
IFT140-205ENST00000561954 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
IFT140-205ENST00000561954 TONSLQ96HA7 1378 aa20.21■□□□□ 0.83
IFT140-205ENST00000561954 KCNA6P17658 529 aa20.21■□□□□ 0.83
IFT140-205ENST00000561954 NEUROD1Q13562 356 aa20.21■□□□□ 0.83
IFT140-205ENST00000561954 SIN3AQ96ST3 1273 aa20.21■□□□□ 0.83
IFT140-205ENST00000561954 XRN1Q8IZH2 1706 aaKnown RBP20.21■□□□□ 0.83
IFT140-205ENST00000561954 PRAG1Q86YV5 1406 aa20.2■□□□□ 0.82
IFT140-205ENST00000561954 CHD2O14647 1828 aaKnown RBP20.2■□□□□ 0.82
IFT140-205ENST00000561954 STRCP1A6NGW2 1772 aa20.19■□□□□ 0.82
IFT140-205ENST00000561954 CCER1Q8TC90 406 aaPredicted RBP20.19■□□□□ 0.82
IFT140-205ENST00000561954 METP08581 1390 aa20.19■□□□□ 0.82
IFT140-205ENST00000561954 PTCH1Q13635 1447 aa20.18■□□□□ 0.82
IFT140-205ENST00000561954 LRRC7Q96NW7 1537 aa20.17■□□□□ 0.82
IFT140-205ENST00000561954 CERKQ8TCT0 537 aa20.16■□□□□ 0.82
IFT140-205ENST00000561954 KDM2AQ9Y2K7 1162 aa20.16■□□□□ 0.82
IFT140-205ENST00000561954 ASXL1Q8IXJ9 1541 aa20.16■□□□□ 0.82
IFT140-205ENST00000561954 L3MBTL2Q969R5 705 aa20.15■□□□□ 0.82
IFT140-205ENST00000561954 PTPRUQ92729 1446 aa20.15■□□□□ 0.82
IFT140-205ENST00000561954 KIAA1210Q9ULL0 1709 aa20.15■□□□□ 0.82
IFT140-205ENST00000561954 C14orf93Q9H972 538 aaKnown RBP20.14■□□□□ 0.81
IFT140-205ENST00000561954 KNDC1Q76NI1 1749 aa20.13■□□□□ 0.81
IFT140-205ENST00000561954 TECPR2O15040 1411 aa20.12■□□□□ 0.81
IFT140-205ENST00000561954 NCOA3Q9Y6Q9 1424 aa20.12■□□□□ 0.81
IFT140-205ENST00000561954 AMOTL2Q9Y2J4 779 aa20.12■□□□□ 0.81
IFT140-205ENST00000561954 ADGRB1O14514 1584 aa20.12■□□□□ 0.81
IFT140-205ENST00000561954 LRPPRCP42704 1394 aaKnown RBP20.11■□□□□ 0.81
IFT140-205ENST00000561954 YTHDC2Q9H6S0 1430 aaKnown RBP20.1■□□□□ 0.81
IFT140-205ENST00000561954 TMEM94Q12767 1356 aa20.1■□□□□ 0.81
IFT140-205ENST00000561954 CFAP70Q5T0N1 1121 aa20.09■□□□□ 0.81
IFT140-205ENST00000561954 PROSER2Q86WR7 435 aaPredicted RBP20.09■□□□□ 0.81
IFT140-205ENST00000561954 TIMELESSQ9UNS1 1208 aa20.09■□□□□ 0.81
IFT140-205ENST00000561954 ABCC11Q96J66 1382 aa20.08■□□□□ 0.8
IFT140-205ENST00000561954 DLC1Q96QB1 1528 aa20.07■□□□□ 0.8
IFT140-205ENST00000561954 TRPM1Q7Z4N2 1603 aa20.06■□□□□ 0.8
IFT140-205ENST00000561954 MSH6P52701 1360 aa20.06■□□□□ 0.8
IFT140-205ENST00000561954 FAM135BQ49AJ0 1406 aa20.05■□□□□ 0.8
IFT140-205ENST00000561954 XIRP1Q702N8 1843 aaKnown RBP20.04■□□□□ 0.8
IFT140-205ENST00000561954 DCCP43146 1447 aa20.04■□□□□ 0.8
IFT140-205ENST00000561954 TMEM132EQ6IEE7 984 aa20.04■□□□□ 0.8
IFT140-205ENST00000561954 ROBO2Q9HCK4 1378 aa20.04■□□□□ 0.8
IFT140-205ENST00000561954 ADGRL3Q9HAR2 1447 aa20.03■□□□□ 0.8
IFT140-205ENST00000561954 RALGAPBQ86X10 1494 aa20.03■□□□□ 0.8
IFT140-205ENST00000561954 C14orf37Q86TY3 774 aa20.02■□□□□ 0.8
IFT140-205ENST00000561954 ROCK2O75116 1388 aaKnown RBP20.01■□□□□ 0.79
IFT140-205ENST00000561954 STK26Q9P289 416 aa20.01■□□□□ 0.79
IFT140-205ENST00000561954 NALCNQ8IZF0 1738 aa20■□□□□ 0.79
IFT140-205ENST00000561954 SIRT1Q96EB6 747 aa19.99■□□□□ 0.79
IFT140-205ENST00000561954 TOM1O60784 492 aa19.98■□□□□ 0.79
IFT140-205ENST00000561954 CDC42BPGQ6DT37 1551 aa19.98■□□□□ 0.79
IFT140-205ENST00000561954 ARHGEF28Q8N1W1 1705 aaKnown RBP19.98■□□□□ 0.79
IFT140-205ENST00000561954 GPRASP1Q5JY77 1395 aa19.97■□□□□ 0.79
IFT140-205ENST00000561954 C19orf44Q9H6X5 657 aa19.97■□□□□ 0.79
IFT140-205ENST00000561954 EIF3AQ14152 1382 aaKnown RBP19.96■□□□□ 0.79
IFT140-205ENST00000561954 UBAP1LF5GYI3 381 aa19.96■□□□□ 0.79
IFT140-205ENST00000561954 FBXO41Q8TF61 875 aa19.96■□□□□ 0.79
IFT140-205ENST00000561954 RBM33Q96EV2 1170 aaKnown RBP19.96■□□□□ 0.79
IFT140-205ENST00000561954 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.96■□□□□ 0.79
IFT140-205ENST00000561954 CADPS2Q86UW7 1296 aa19.95■□□□□ 0.78
IFT140-205ENST00000561954 ATF3P18847 181 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms