RNA–Protein interactions for RNA: ENST00000561790.1

RAB43P1-201, Transcript of RAB43 pseudogene 1, humanhuman

BASIC

Gene RAB43P1, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43P1-201ENST00000561790 RBM33Q96EV2 1170 aaKnown RBP23.64■■□□□ 1.37
RAB43P1-201ENST00000561790 PPP1R15AO75807 674 aaPredicted RBP23.63■■□□□ 1.37
RAB43P1-201ENST00000561790 NKTRP30414 1462 aaKnown RBP23.6■■□□□ 1.37
RAB43P1-201ENST00000561790 CHGAP10645 457 aaKnown RBP23.59■■□□□ 1.37
RAB43P1-201ENST00000561790 MSH6P52701 1360 aa23.58■■□□□ 1.37
RAB43P1-201ENST00000561790 RIMS2Q9UQ26 1411 aa23.58■■□□□ 1.36
RAB43P1-201ENST00000561790 PLEKHG1Q9ULL1 1385 aa23.57■■□□□ 1.36
RAB43P1-201ENST00000561790 NWD1Q149M9 1564 aa23.57■■□□□ 1.36
RAB43P1-201ENST00000561790 ZFYVE9O95405 1425 aa23.56■■□□□ 1.36
RAB43P1-201ENST00000561790 ROBO1Q9Y6N7 1651 aa23.55■■□□□ 1.36
RAB43P1-201ENST00000561790 MYO5BQ9ULV0 1848 aa23.55■■□□□ 1.36
RAB43P1-201ENST00000561790 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.55■■□□□ 1.36
RAB43P1-201ENST00000561790 GCC2Q8IWJ2 1684 aa23.54■■□□□ 1.36
RAB43P1-201ENST00000561790 UNC13BO14795 1591 aa23.53■■□□□ 1.36
RAB43P1-201ENST00000561790 RGS17Q9UGC6 210 aaPredicted RBP23.53■■□□□ 1.36
RAB43P1-201ENST00000561790 TMEM131LA2VDJ0 1609 aa23.52■■□□□ 1.36
RAB43P1-201ENST00000561790 SLAIN2Q9P270 581 aa23.52■■□□□ 1.36
RAB43P1-201ENST00000561790 ROCK1Q13464 1354 aa23.52■■□□□ 1.36
RAB43P1-201ENST00000561790 TBX22Q9Y458 520 aa23.51■■□□□ 1.35
RAB43P1-201ENST00000561790 C14orf37Q86TY3 774 aa23.5■■□□□ 1.35
RAB43P1-201ENST00000561790 ITGAEP38570 1179 aa23.49■■□□□ 1.35
RAB43P1-201ENST00000561790 NUTM2DQ5VT03 806 aaPredicted RBP23.49■■□□□ 1.35
RAB43P1-201ENST00000561790 CHD2O14647 1828 aaKnown RBP23.49■■□□□ 1.35
RAB43P1-201ENST00000561790 NUP155O75694 1391 aa23.47■■□□□ 1.35
RAB43P1-201ENST00000561790 E9PCH4 1651 aa23.47■■□□□ 1.35
RAB43P1-201ENST00000561790 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
RAB43P1-201ENST00000561790 PHLPP1O60346 1717 aa23.43■■□□□ 1.34
RAB43P1-201ENST00000561790 NCOA3Q9Y6Q9 1424 aa23.42■■□□□ 1.34
RAB43P1-201ENST00000561790 POTEAQ6S8J7 498 aa23.42■■□□□ 1.34
RAB43P1-201ENST00000561790 ADAMTS13Q76LX8 1427 aa23.42■■□□□ 1.34
RAB43P1-201ENST00000561790 JCADQ9P266 1359 aa23.41■■□□□ 1.34
RAB43P1-201ENST00000561790 PIK3R4Q99570 1358 aa23.4■■□□□ 1.34
RAB43P1-201ENST00000561790 DIP2AQ14689 1571 aa23.4■■□□□ 1.34
RAB43P1-201ENST00000561790 ATF3P18847 181 aa23.4■■□□□ 1.34
RAB43P1-201ENST00000561790 CADPS2Q86UW7 1296 aa23.39■■□□□ 1.33
RAB43P1-201ENST00000561790 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.33
RAB43P1-201ENST00000561790 C19orf44Q9H6X5 657 aa23.39■■□□□ 1.33
RAB43P1-201ENST00000561790 AMOTL2Q9Y2J4 779 aa23.37■■□□□ 1.33
RAB43P1-201ENST00000561790 TRPM2O94759 1503 aa23.35■■□□□ 1.33
RAB43P1-201ENST00000561790 ZNF326Q5BKZ1 582 aaKnown RBP23.34■■□□□ 1.33
RAB43P1-201ENST00000561790 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.33■■□□□ 1.32
RAB43P1-201ENST00000561790 COL16A1Q07092 1604 aaPredicted RBP23.31■■□□□ 1.32
RAB43P1-201ENST00000561790 MEX3CQ5U5Q3 659 aaKnown RBP23.31■■□□□ 1.32
RAB43P1-201ENST00000561790 PTPRUQ92729 1446 aa23.3■■□□□ 1.32
RAB43P1-201ENST00000561790 SPATA31A6Q5VVP1 1343 aa23.3■■□□□ 1.32
RAB43P1-201ENST00000561790 SPHKAPQ2M3C7 1700 aa23.28■■□□□ 1.32
RAB43P1-201ENST00000561790 AHDC1Q5TGY3 1603 aaPredicted RBP23.26■■□□□ 1.31
RAB43P1-201ENST00000561790 BRINP3Q76B58 766 aa23.25■■□□□ 1.31
RAB43P1-201ENST00000561790 SETBP1Q9Y6X0 1596 aa23.24■■□□□ 1.31
RAB43P1-201ENST00000561790 ZNF772Q68DY9 489 aaPredicted RBP23.23■■□□□ 1.31
RAB43P1-201ENST00000561790 DCCP43146 1447 aa23.23■■□□□ 1.31
RAB43P1-201ENST00000561790 LRP6O75581 1613 aa23.22■■□□□ 1.31
RAB43P1-201ENST00000561790 NRXN3Q9Y4C0 1643 aa23.22■■□□□ 1.31
RAB43P1-201ENST00000561790 METP08581 1390 aa23.21■■□□□ 1.31
RAB43P1-201ENST00000561790 XRN1Q8IZH2 1706 aaKnown RBP23.21■■□□□ 1.31
RAB43P1-201ENST00000561790 SHPRHQ149N8 1683 aa23.19■■□□□ 1.3
RAB43P1-201ENST00000561790 NUTM2BA6NNL0 878 aaPredicted RBP23.19■■□□□ 1.3
RAB43P1-201ENST00000561790 NUTM2EB1AL46 878 aaPredicted RBP23.19■■□□□ 1.3
RAB43P1-201ENST00000561790 NUTM2AQ8IVF1 878 aaPredicted RBP23.19■■□□□ 1.3
RAB43P1-201ENST00000561790 SETD1AO15047 1707 aaKnown RBP23.17■■□□□ 1.3
RAB43P1-201ENST00000561790 CLTCL1P53675 1640 aa23.17■■□□□ 1.3
RAB43P1-201ENST00000561790 ASXL1Q8IXJ9 1541 aa23.17■■□□□ 1.3
RAB43P1-201ENST00000561790 MST1RQ04912 1400 aa23.16■■□□□ 1.3
RAB43P1-201ENST00000561790 NEXMIFQ5QGS0 1516 aa23.15■■□□□ 1.3
RAB43P1-201ENST00000561790 TRIM52Q96A61 297 aa23.15■■□□□ 1.3
RAB43P1-201ENST00000561790 NAIPQ13075 1403 aa23.15■■□□□ 1.3
RAB43P1-201ENST00000561790 RRBP1Q9P2E9 1410 aaKnown RBP23.15■■□□□ 1.3
RAB43P1-201ENST00000561790 KIF1BO60333 1816 aa23.14■■□□□ 1.29
RAB43P1-201ENST00000561790 ADGRL3Q9HAR2 1447 aa23.14■■□□□ 1.29
RAB43P1-201ENST00000561790 LRRC59Q96AG4 307 aaKnown RBP23.13■■□□□ 1.29
RAB43P1-201ENST00000561790 VGFO15240 615 aaPredicted RBP23.12■■□□□ 1.29
RAB43P1-201ENST00000561790 SETD5Q9C0A6 1442 aa23.11■■□□□ 1.29
RAB43P1-201ENST00000561790 RXRBP28702 533 aa23.11■■□□□ 1.29
RAB43P1-201ENST00000561790 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.29
RAB43P1-201ENST00000561790 DDX17Q92841 729 aaKnown RBP23.08■■□□□ 1.29
RAB43P1-201ENST00000561790 AFF2P51816 1311 aa23.08■■□□□ 1.28
RAB43P1-201ENST00000561790 SLC4A1APQ9BWU0 796 aaKnown RBP23.07■■□□□ 1.28
RAB43P1-201ENST00000561790 NALCNQ8IZF0 1738 aa23.06■■□□□ 1.28
RAB43P1-201ENST00000561790 RPGRIP1LQ68CZ1 1315 aa23.06■■□□□ 1.28
RAB43P1-201ENST00000561790 UPF1Q92900 1129 aaKnown RBP eCLIP23.04■■□□□ 1.28
RAB43P1-201ENST00000561790 C8orf37Q96NL8 207 aa23.04■■□□□ 1.28
RAB43P1-201ENST00000561790 PNPLA6Q8IY17 1366 aa23.03■■□□□ 1.28
RAB43P1-201ENST00000561790 HFM1A2PYH4 1435 aa23.03■■□□□ 1.28
RAB43P1-201ENST00000561790 PTCH1Q13635 1447 aa23.03■■□□□ 1.28
RAB43P1-201ENST00000561790 C1orf167Q5SNV9 1468 aa23.03■■□□□ 1.28
RAB43P1-201ENST00000561790 ROBO2Q9HCK4 1378 aa23.01■■□□□ 1.27
RAB43P1-201ENST00000561790 CDK12Q9NYV4 1490 aaPredicted RBP22.99■■□□□ 1.27
RAB43P1-201ENST00000561790 ADAMTS2O95450 1211 aa22.98■■□□□ 1.27
RAB43P1-201ENST00000561790 ORAI2Q96SN7 254 aa22.98■■□□□ 1.27
RAB43P1-201ENST00000561790 QTRT2Q9H974 415 aaKnown RBP22.98■■□□□ 1.27
RAB43P1-201ENST00000561790 NGLY1Q96IV0 654 aa22.97■■□□□ 1.27
RAB43P1-201ENST00000561790 RBM6P78332 1123 aaKnown RBP22.95■■□□□ 1.26
RAB43P1-201ENST00000561790 PPLO60437 1756 aa22.94■■□□□ 1.26
RAB43P1-201ENST00000561790 SOS2Q07890 1332 aaPredicted RBP22.94■■□□□ 1.26
RAB43P1-201ENST00000561790 FOXD1Q16676 465 aa22.94■■□□□ 1.26
RAB43P1-201ENST00000561790 PRAG1Q86YV5 1406 aa22.93■■□□□ 1.26
RAB43P1-201ENST00000561790 LAMC1P11047 1609 aa22.91■■□□□ 1.26
RAB43P1-201ENST00000561790 RGL3Q3MIN7 710 aa22.91■■□□□ 1.26
RAB43P1-201ENST00000561790 CCDC144AA2RUR9 1427 aa22.91■■□□□ 1.26
RAB43P1-201ENST00000561790 ESCO1Q5FWF5 840 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms