RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 HDGFP51858 240 aaKnown RBP33.48■■■□□ 2.95
TMEM249-201ENST00000561638 RIMS2Q9UQ26 1411 aa33.48■■■□□ 2.95
TMEM249-201ENST00000561638 PPP1R15AO75807 674 aaPredicted RBP33.47■■■□□ 2.95
TMEM249-201ENST00000561638 NEXMIFQ5QGS0 1516 aa33.47■■■□□ 2.95
TMEM249-201ENST00000561638 EID1Q9Y6B2 187 aa33.45■■■□□ 2.95
TMEM249-201ENST00000561638 LMTK3Q96Q04 1460 aa33.45■■■□□ 2.95
TMEM249-201ENST00000561638 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.44■■■□□ 2.94
TMEM249-201ENST00000561638 PPLO60437 1756 aa33.44■■■□□ 2.94
TMEM249-201ENST00000561638 VGFO15240 615 aaPredicted RBP33.44■■■□□ 2.94
TMEM249-201ENST00000561638 SLIT1O75093 1534 aa33.43■■■□□ 2.94
TMEM249-201ENST00000561638 STAC3Q96MF2 364 aa33.42■■■□□ 2.94
TMEM249-201ENST00000561638 ZFYVE9O95405 1425 aa33.42■■■□□ 2.94
TMEM249-201ENST00000561638 IFT172Q9UG01 1749 aa33.42■■■□□ 2.94
TMEM249-201ENST00000561638 AEBP2Q6ZN18 517 aaPredicted RBP33.42■■■□□ 2.94
TMEM249-201ENST00000561638 TXNDC2Q86VQ3 553 aa33.41■■■□□ 2.94
TMEM249-201ENST00000561638 ARHGAP23Q9P227 1491 aa33.4■■■□□ 2.94
TMEM249-201ENST00000561638 HSPA2P54652 639 aa33.39■■■□□ 2.94
TMEM249-201ENST00000561638 MYOM2P54296 1465 aa33.39■■■□□ 2.94
TMEM249-201ENST00000561638 ANKLE2Q86XL3 938 aa33.37■■■□□ 2.93
TMEM249-201ENST00000561638 SENP3Q9H4L4 574 aaPredicted RBP33.37■■■□□ 2.93
TMEM249-201ENST00000561638 ADGRF5Q8IZF2 1346 aa33.36■■■□□ 2.93
TMEM249-201ENST00000561638 LTKP29376 864 aa33.36■■■□□ 2.93
TMEM249-201ENST00000561638 SCAF11Q99590 1463 aaKnown RBP33.35■■■□□ 2.93
TMEM249-201ENST00000561638 BCANQ96GW7 911 aa33.34■■■□□ 2.93
TMEM249-201ENST00000561638 PRAG1Q86YV5 1406 aa33.32■■■□□ 2.92
TMEM249-201ENST00000561638 NRXN1Q9ULB1 1477 aa33.28■■■□□ 2.92
TMEM249-201ENST00000561638 PIK3C2GO75747 1445 aa33.28■■■□□ 2.92
TMEM249-201ENST00000561638 NBPF8Q3BBV2 869 aa33.26■■■□□ 2.92
TMEM249-201ENST00000561638 PLEKHG1Q9ULL1 1385 aa33.26■■■□□ 2.91
TMEM249-201ENST00000561638 NCKAP5LQ9HCH0 1330 aa33.25■■■□□ 2.91
TMEM249-201ENST00000561638 POLR1AO95602 1720 aaPredicted RBP33.24■■■□□ 2.91
TMEM249-201ENST00000561638 CFAP70Q5T0N1 1121 aa33.19■■■□□ 2.9
TMEM249-201ENST00000561638 NPHP4O75161 1426 aaPredicted RBP33.18■■■□□ 2.9
TMEM249-201ENST00000561638 SETBP1Q9Y6X0 1596 aa33.18■■■□□ 2.9
TMEM249-201ENST00000561638 C14orf93Q9H972 538 aaKnown RBP33.16■■■□□ 2.9
TMEM249-201ENST00000561638 IQGAP1P46940 1657 aa33.16■■■□□ 2.9
TMEM249-201ENST00000561638 ROCK2O75116 1388 aaKnown RBP33.16■■■□□ 2.9
TMEM249-201ENST00000561638 MED14O60244 1454 aa33.15■■■□□ 2.9
TMEM249-201ENST00000561638 SLC26A8Q96RN1 970 aa33.15■■■□□ 2.9
TMEM249-201ENST00000561638 LAMC1P11047 1609 aa33.15■■■□□ 2.9
TMEM249-201ENST00000561638 TRPM1Q7Z4N2 1603 aa33.15■■■□□ 2.9
TMEM249-201ENST00000561638 NRXN3Q9Y4C0 1643 aa33.13■■■□□ 2.89
TMEM249-201ENST00000561638 RALGAPBQ86X10 1494 aa33.13■■■□□ 2.89
TMEM249-201ENST00000561638 ALKQ9UM73 1620 aa33.13■■■□□ 2.89
TMEM249-201ENST00000561638 KIAA1210Q9ULL0 1709 aa33.11■■■□□ 2.89
TMEM249-201ENST00000561638 NBPF1Q3BBV0 1214 aa33.11■■■□□ 2.89
TMEM249-201ENST00000561638 ADAMTS13Q76LX8 1427 aa33.11■■■□□ 2.89
TMEM249-201ENST00000561638 STRCQ7RTU9 1775 aa33.09■■■□□ 2.89
TMEM249-201ENST00000561638 TMEM132EQ6IEE7 984 aa33.07■■■□□ 2.88
TMEM249-201ENST00000561638 CARD11Q9BXL7 1154 aa33.07■■■□□ 2.88
TMEM249-201ENST00000561638 DIP2AQ14689 1571 aa33.07■■■□□ 2.88
TMEM249-201ENST00000561638 TBX22Q9Y458 520 aa33.06■■■□□ 2.88
TMEM249-201ENST00000561638 METP08581 1390 aa33.02■■■□□ 2.88
TMEM249-201ENST00000561638 SETD1AO15047 1707 aaKnown RBP33.02■■■□□ 2.88
TMEM249-201ENST00000561638 DMRT2Q9Y5R5 561 aa33.01■■■□□ 2.88
TMEM249-201ENST00000561638 ADGRB1O14514 1584 aa33.01■■■□□ 2.87
TMEM249-201ENST00000561638 GPRASP1Q5JY77 1395 aa33■■■□□ 2.87
TMEM249-201ENST00000561638 ASXL1Q8IXJ9 1541 aa32.99■■■□□ 2.87
TMEM249-201ENST00000561638 STK26Q9P289 416 aa32.98■■■□□ 2.87
TMEM249-201ENST00000561638 YTHDC2Q9H6S0 1430 aaKnown RBP32.95■■■□□ 2.87
TMEM249-201ENST00000561638 PIK3R4Q99570 1358 aa32.94■■■□□ 2.86
TMEM249-201ENST00000561638 TRAK1Q9UPV9 953 aa32.93■■■□□ 2.86
TMEM249-201ENST00000561638 LRPPRCP42704 1394 aaKnown RBP32.91■■■□□ 2.86
TMEM249-201ENST00000561638 USP47Q96K76 1375 aa32.9■■■□□ 2.86
TMEM249-201ENST00000561638 AMOTL2Q9Y2J4 779 aa32.9■■■□□ 2.86
TMEM249-201ENST00000561638 EIF3AQ14152 1382 aaKnown RBP32.88■■■□□ 2.85
TMEM249-201ENST00000561638 EIF4G2P78344 907 aaKnown RBP eCLIP32.88■■■□□ 2.85
TMEM249-201ENST00000561638 PTPRUQ92729 1446 aa32.87■■■□□ 2.85
TMEM249-201ENST00000561638 ABCC11Q96J66 1382 aa32.86■■■□□ 2.85
TMEM249-201ENST00000561638 KCNA6P17658 529 aa32.83■■■□□ 2.85
TMEM249-201ENST00000561638 CHD2O14647 1828 aaKnown RBP32.82■■■□□ 2.85
TMEM249-201ENST00000561638 TECPR2O15040 1411 aa32.81■■■□□ 2.84
TMEM249-201ENST00000561638 POGKQ9P215 609 aa32.81■■■□□ 2.84
TMEM249-201ENST00000561638 XRN1Q8IZH2 1706 aaKnown RBP32.8■■■□□ 2.84
TMEM249-201ENST00000561638 KNDC1Q76NI1 1749 aa32.8■■■□□ 2.84
TMEM249-201ENST00000561638 HSPA5P11021 654 aaKnown RBP32.79■■■□□ 2.84
TMEM249-201ENST00000561638 PRAM1Q96QH2 718 aa32.79■■■□□ 2.84
TMEM249-201ENST00000561638 ARHGEF28Q8N1W1 1705 aaKnown RBP32.78■■■□□ 2.84
TMEM249-201ENST00000561638 DLC1Q96QB1 1528 aa32.78■■■□□ 2.84
TMEM249-201ENST00000561638 ROBO2Q9HCK4 1378 aa32.78■■■□□ 2.84
TMEM249-201ENST00000561638 ST20-MTHFSA0A0A6YYL1 179 aa32.78■■■□□ 2.84
TMEM249-201ENST00000561638 CPS1P31327 1500 aa32.77■■■□□ 2.84
TMEM249-201ENST00000561638 SAFB2Q14151 953 aaKnown RBP eCLIP32.77■■■□□ 2.84
TMEM249-201ENST00000561638 PTCH1Q13635 1447 aa32.76■■■□□ 2.84
TMEM249-201ENST00000561638 ZNF335Q9H4Z2 1342 aaPredicted RBP32.76■■■□□ 2.84
TMEM249-201ENST00000561638 CENPJQ9HC77 1338 aaPredicted RBP32.76■■■□□ 2.84
TMEM249-201ENST00000561638 HIRIP3Q9BW71 556 aaPredicted RBP32.76■■■□□ 2.84
TMEM249-201ENST00000561638 NWD1Q149M9 1564 aa32.76■■■□□ 2.84
TMEM249-201ENST00000561638 WAPLQ7Z5K2 1190 aa32.75■■■□□ 2.83
TMEM249-201ENST00000561638 FAM135BQ49AJ0 1406 aa32.74■■■□□ 2.83
TMEM249-201ENST00000561638 NKTRP30414 1462 aaKnown RBP32.72■■■□□ 2.83
TMEM249-201ENST00000561638 SIRT1Q96EB6 747 aa32.72■■■□□ 2.83
TMEM249-201ENST00000561638 PLEKHH1Q9ULM0 1364 aa32.7■■■□□ 2.83
TMEM249-201ENST00000561638 PROSER2Q86WR7 435 aaPredicted RBP32.69■■■□□ 2.82
TMEM249-201ENST00000561638 STRCP1A6NGW2 1772 aa32.68■■■□□ 2.82
TMEM249-201ENST00000561638 QRICH2Q9H0J4 1663 aa32.67■■■□□ 2.82
TMEM249-201ENST00000561638 RBM33Q96EV2 1170 aaKnown RBP32.65■■■□□ 2.82
TMEM249-201ENST00000561638 C14orf37Q86TY3 774 aa32.65■■■□□ 2.82
TMEM249-201ENST00000561638 MINK1Q8N4C8 1332 aaPredicted RBP32.65■■■□□ 2.82
TMEM249-201ENST00000561638 TESK2Q96S53 571 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms