RNA–Protein interactions for RNA: ENST00000561610.1

PPP4C-202, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-202ENST00000561610 MYO5BQ9ULV0 1848 aa27.43■■□□□ 1.98
PPP4C-202ENST00000561610 ZNF326Q5BKZ1 582 aaKnown RBP27.42■■□□□ 1.98
PPP4C-202ENST00000561610 POLR1AO95602 1720 aaPredicted RBP27.42■■□□□ 1.98
PPP4C-202ENST00000561610 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
PPP4C-202ENST00000561610 CLTCL1P53675 1640 aa27.41■■□□□ 1.98
PPP4C-202ENST00000561610 TXNDC2Q86VQ3 553 aa27.41■■□□□ 1.98
PPP4C-202ENST00000561610 KDM5AP29375 1690 aaKnown RBP27.39■■□□□ 1.98
PPP4C-202ENST00000561610 TMEM131LA2VDJ0 1609 aa27.38■■□□□ 1.97
PPP4C-202ENST00000561610 KIF1BO60333 1816 aa27.38■■□□□ 1.97
PPP4C-202ENST00000561610 CCDC144AA2RUR9 1427 aa27.38■■□□□ 1.97
PPP4C-202ENST00000561610 PPP1R15AO75807 674 aaPredicted RBP27.38■■□□□ 1.97
PPP4C-202ENST00000561610 BCANQ96GW7 911 aa27.38■■□□□ 1.97
PPP4C-202ENST00000561610 TMEM2Q9UHN6 1383 aa27.38■■□□□ 1.97
PPP4C-202ENST00000561610 NEURL4Q96JN8 1562 aa27.35■■□□□ 1.97
PPP4C-202ENST00000561610 HDGFP51858 240 aaKnown RBP27.35■■□□□ 1.97
PPP4C-202ENST00000561610 NUTM2DQ5VT03 806 aaPredicted RBP27.35■■□□□ 1.97
PPP4C-202ENST00000561610 SLIT1O75093 1534 aa27.35■■□□□ 1.97
PPP4C-202ENST00000561610 SCAF11Q99590 1463 aaKnown RBP27.34■■□□□ 1.97
PPP4C-202ENST00000561610 LTKP29376 864 aa27.33■■□□□ 1.97
PPP4C-202ENST00000561610 RIMS2Q9UQ26 1411 aa27.33■■□□□ 1.97
PPP4C-202ENST00000561610 ARHGAP23Q9P227 1491 aa27.32■■□□□ 1.96
PPP4C-202ENST00000561610 NPHP4O75161 1426 aaPredicted RBP27.32■■□□□ 1.96
PPP4C-202ENST00000561610 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.29■■□□□ 1.96
PPP4C-202ENST00000561610 ALKQ9UM73 1620 aa27.29■■□□□ 1.96
PPP4C-202ENST00000561610 RGL3Q3MIN7 710 aa27.28■■□□□ 1.96
PPP4C-202ENST00000561610 IQGAP1P46940 1657 aa27.28■■□□□ 1.96
PPP4C-202ENST00000561610 MED14O60244 1454 aa27.23■■□□□ 1.95
PPP4C-202ENST00000561610 ZFYVE9O95405 1425 aa27.23■■□□□ 1.95
PPP4C-202ENST00000561610 ANKRD30BQ9BXX2 1392 aa27.23■■□□□ 1.95
PPP4C-202ENST00000561610 SLC26A8Q96RN1 970 aa27.18■■□□□ 1.94
PPP4C-202ENST00000561610 DHX57Q6P158 1386 aaKnown RBP27.16■■□□□ 1.94
PPP4C-202ENST00000561610 PLEKHG1Q9ULL1 1385 aa27.16■■□□□ 1.94
PPP4C-202ENST00000561610 NEXMIFQ5QGS0 1516 aa27.15■■□□□ 1.94
PPP4C-202ENST00000561610 RPGRIP1LQ68CZ1 1315 aa27.15■■□□□ 1.94
PPP4C-202ENST00000561610 VGFO15240 615 aaPredicted RBP27.14■■□□□ 1.93
PPP4C-202ENST00000561610 RGS17Q9UGC6 210 aaPredicted RBP27.14■■□□□ 1.93
PPP4C-202ENST00000561610 SPATA31E1Q6ZUB1 1445 aa27.12■■□□□ 1.93
PPP4C-202ENST00000561610 LRRC7Q96NW7 1537 aa27.1■■□□□ 1.93
PPP4C-202ENST00000561610 PPLO60437 1756 aa27.1■■□□□ 1.93
PPP4C-202ENST00000561610 NEUROD1Q13562 356 aa27.1■■□□□ 1.93
PPP4C-202ENST00000561610 STRCP1A6NGW2 1772 aa27.08■■□□□ 1.93
PPP4C-202ENST00000561610 SIN3AQ96ST3 1273 aa27.06■■□□□ 1.92
PPP4C-202ENST00000561610 KDM2AQ9Y2K7 1162 aa27.05■■□□□ 1.92
PPP4C-202ENST00000561610 DCAF11Q8TEB1 546 aa27.03■■□□□ 1.92
PPP4C-202ENST00000561610 IFT172Q9UG01 1749 aa27.03■■□□□ 1.92
PPP4C-202ENST00000561610 TBX22Q9Y458 520 aa27.02■■□□□ 1.92
PPP4C-202ENST00000561610 ADGRF5Q8IZF2 1346 aa27.02■■□□□ 1.92
PPP4C-202ENST00000561610 ADAMTS13Q76LX8 1427 aa27.01■■□□□ 1.91
PPP4C-202ENST00000561610 POTEAQ6S8J7 498 aa27■■□□□ 1.91
PPP4C-202ENST00000561610 DIP2AQ14689 1571 aa27■■□□□ 1.91
PPP4C-202ENST00000561610 SETBP1Q9Y6X0 1596 aa26.99■■□□□ 1.91
PPP4C-202ENST00000561610 SETD1AO15047 1707 aaKnown RBP26.98■■□□□ 1.91
PPP4C-202ENST00000561610 NRXN3Q9Y4C0 1643 aa26.98■■□□□ 1.91
PPP4C-202ENST00000561610 KCNA6P17658 529 aa26.97■■□□□ 1.91
PPP4C-202ENST00000561610 PROSER2Q86WR7 435 aaPredicted RBP26.92■■□□□ 1.9
PPP4C-202ENST00000561610 CCER1Q8TC90 406 aaPredicted RBP26.92■■□□□ 1.9
PPP4C-202ENST00000561610 CHD2O14647 1828 aaKnown RBP26.92■■□□□ 1.9
PPP4C-202ENST00000561610 MYOM2P54296 1465 aa26.92■■□□□ 1.9
PPP4C-202ENST00000561610 AMOTL2Q9Y2J4 779 aa26.91■■□□□ 1.9
PPP4C-202ENST00000561610 METP08581 1390 aa26.91■■□□□ 1.9
PPP4C-202ENST00000561610 RBM33Q96EV2 1170 aaKnown RBP26.9■■□□□ 1.9
PPP4C-202ENST00000561610 PIK3R4Q99570 1358 aa26.89■■□□□ 1.9
PPP4C-202ENST00000561610 PIK3C2GO75747 1445 aa26.89■■□□□ 1.89
PPP4C-202ENST00000561610 NWD1Q149M9 1564 aa26.87■■□□□ 1.89
PPP4C-202ENST00000561610 TONSLQ96HA7 1378 aa26.87■■□□□ 1.89
PPP4C-202ENST00000561610 C14orf37Q86TY3 774 aa26.87■■□□□ 1.89
PPP4C-202ENST00000561610 L3MBTL2Q969R5 705 aa26.87■■□□□ 1.89
PPP4C-202ENST00000561610 CFAP70Q5T0N1 1121 aa26.86■■□□□ 1.89
PPP4C-202ENST00000561610 STAC3Q96MF2 364 aa26.86■■□□□ 1.89
PPP4C-202ENST00000561610 PTPRUQ92729 1446 aa26.85■■□□□ 1.89
PPP4C-202ENST00000561610 TMEM132EQ6IEE7 984 aa26.85■■□□□ 1.89
PPP4C-202ENST00000561610 STK26Q9P289 416 aa26.85■■□□□ 1.89
PPP4C-202ENST00000561610 NKTRP30414 1462 aaKnown RBP26.84■■□□□ 1.89
PPP4C-202ENST00000561610 XIRP1Q702N8 1843 aaKnown RBP26.83■■□□□ 1.89
PPP4C-202ENST00000561610 NRXN1Q9ULB1 1477 aa26.83■■□□□ 1.88
PPP4C-202ENST00000561610 TMEM94Q12767 1356 aa26.82■■□□□ 1.88
PPP4C-202ENST00000561610 C14orf93Q9H972 538 aaKnown RBP26.82■■□□□ 1.88
PPP4C-202ENST00000561610 LAMC1P11047 1609 aa26.8■■□□□ 1.88
PPP4C-202ENST00000561610 FAM135BQ49AJ0 1406 aa26.79■■□□□ 1.88
PPP4C-202ENST00000561610 XRN1Q8IZH2 1706 aaKnown RBP26.78■■□□□ 1.88
PPP4C-202ENST00000561610 ROBO1Q9Y6N7 1651 aa26.77■■□□□ 1.88
PPP4C-202ENST00000561610 ASXL1Q8IXJ9 1541 aa26.73■■□□□ 1.87
PPP4C-202ENST00000561610 MSH6P52701 1360 aa26.73■■□□□ 1.87
PPP4C-202ENST00000561610 CLSPNQ9HAW4 1339 aa26.73■■□□□ 1.87
PPP4C-202ENST00000561610 PRAG1Q86YV5 1406 aa26.72■■□□□ 1.87
PPP4C-202ENST00000561610 YTHDC2Q9H6S0 1430 aaKnown RBP26.72■■□□□ 1.87
PPP4C-202ENST00000561610 LRPPRCP42704 1394 aaKnown RBP26.71■■□□□ 1.87
PPP4C-202ENST00000561610 ROBO2Q9HCK4 1378 aa26.7■■□□□ 1.86
PPP4C-202ENST00000561610 TRAK1Q9UPV9 953 aa26.68■■□□□ 1.86
PPP4C-202ENST00000561610 PTCH1Q13635 1447 aa26.67■■□□□ 1.86
PPP4C-202ENST00000561610 ATF3P18847 181 aa26.65■■□□□ 1.86
PPP4C-202ENST00000561610 WAPLQ7Z5K2 1190 aa26.65■■□□□ 1.86
PPP4C-202ENST00000561610 POGKQ9P215 609 aa26.65■■□□□ 1.86
PPP4C-202ENST00000561610 ABCC11Q96J66 1382 aa26.65■■□□□ 1.86
PPP4C-202ENST00000561610 KNDC1Q76NI1 1749 aa26.65■■□□□ 1.86
PPP4C-202ENST00000561610 SAFB2Q14151 953 aaKnown RBP eCLIP26.65■■□□□ 1.86
PPP4C-202ENST00000561610 NBPF1Q3BBV0 1214 aa26.65■■□□□ 1.86
PPP4C-202ENST00000561610 UPF1Q92900 1129 aaKnown RBP eCLIP26.65■■□□□ 1.86
PPP4C-202ENST00000561610 PHLPP1O60346 1717 aa26.64■■□□□ 1.86
PPP4C-202ENST00000561610 KIAA1210Q9ULL0 1709 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms