RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 CHGAP10645 457 aaKnown RBP31.03■■■□□ 2.56
TPM1-232ENST00000561425 SPHKAPQ2M3C7 1700 aa31.02■■■□□ 2.56
TPM1-232ENST00000561425 SLC26A8Q96RN1 970 aa31.01■■■□□ 2.55
TPM1-232ENST00000561425 KCNA6P17658 529 aa31■■■□□ 2.55
TPM1-232ENST00000561425 SLC4A1APQ9BWU0 796 aaKnown RBP30.99■■■□□ 2.55
TPM1-232ENST00000561425 TRPM2O94759 1503 aa30.98■■■□□ 2.55
TPM1-232ENST00000561425 TBX22Q9Y458 520 aa30.96■■■□□ 2.55
TPM1-232ENST00000561425 TOM1O60784 492 aa30.95■■■□□ 2.55
TPM1-232ENST00000561425 ACIN1Q9UKV3 1341 aaKnown RBP30.95■■■□□ 2.54
TPM1-232ENST00000561425 PPP1R15AO75807 674 aaPredicted RBP30.94■■■□□ 2.54
TPM1-232ENST00000561425 CLTCL1P53675 1640 aa30.92■■■□□ 2.54
TPM1-232ENST00000561425 ALKQ9UM73 1620 aa30.91■■■□□ 2.54
TPM1-232ENST00000561425 ADAMTS13Q76LX8 1427 aa30.91■■■□□ 2.54
TPM1-232ENST00000561425 SETD5Q9C0A6 1442 aa30.9■■■□□ 2.54
TPM1-232ENST00000561425 NUTM2DQ5VT03 806 aaPredicted RBP30.9■■■□□ 2.54
TPM1-232ENST00000561425 BCANQ96GW7 911 aa30.89■■■□□ 2.54
TPM1-232ENST00000561425 MPHOSPH9Q99550 1183 aa30.89■■■□□ 2.54
TPM1-232ENST00000561425 NWD1Q149M9 1564 aa30.88■■■□□ 2.53
TPM1-232ENST00000561425 NKTRP30414 1462 aaKnown RBP30.84■■■□□ 2.53
TPM1-232ENST00000561425 PIK3R4Q99570 1358 aa30.84■■■□□ 2.53
TPM1-232ENST00000561425 TMEM94Q12767 1356 aa30.83■■■□□ 2.53
TPM1-232ENST00000561425 ZNF326Q5BKZ1 582 aaKnown RBP30.82■■■□□ 2.52
TPM1-232ENST00000561425 DIP2AQ14689 1571 aa30.82■■■□□ 2.52
TPM1-232ENST00000561425 FOXD1Q16676 465 aa30.81■■■□□ 2.52
TPM1-232ENST00000561425 SENP3Q9H4L4 574 aaPredicted RBP30.81■■■□□ 2.52
TPM1-232ENST00000561425 XIRP1Q702N8 1843 aaKnown RBP30.81■■■□□ 2.52
TPM1-232ENST00000561425 PROSER2Q86WR7 435 aaPredicted RBP30.8■■■□□ 2.52
TPM1-232ENST00000561425 NEXMIFQ5QGS0 1516 aa30.79■■■□□ 2.52
TPM1-232ENST00000561425 CHD2O14647 1828 aaKnown RBP30.79■■■□□ 2.52
TPM1-232ENST00000561425 PIP4K2BP78356 416 aa30.78■■■□□ 2.52
TPM1-232ENST00000561425 SETBP1Q9Y6X0 1596 aa30.78■■■□□ 2.52
TPM1-232ENST00000561425 RAB3GAP2Q9H2M9 1393 aa30.78■■■□□ 2.52
TPM1-232ENST00000561425 RPGRIP1LQ68CZ1 1315 aa30.77■■■□□ 2.52
TPM1-232ENST00000561425 HRCP23327 699 aa30.76■■■□□ 2.51
TPM1-232ENST00000561425 KIF1BO60333 1816 aa30.75■■■□□ 2.51
TPM1-232ENST00000561425 NRXN3Q9Y4C0 1643 aa30.75■■■□□ 2.51
TPM1-232ENST00000561425 NCOA3Q9Y6Q9 1424 aa30.73■■■□□ 2.51
TPM1-232ENST00000561425 HSPA1LP34931 641 aa30.72■■■□□ 2.51
TPM1-232ENST00000561425 PTPRUQ92729 1446 aa30.72■■■□□ 2.51
TPM1-232ENST00000561425 VGFO15240 615 aaPredicted RBP30.71■■■□□ 2.51
TPM1-232ENST00000561425 RBM33Q96EV2 1170 aaKnown RBP30.71■■■□□ 2.51
TPM1-232ENST00000561425 SCAF1Q9H7N4 1312 aaKnown RBP30.7■■■□□ 2.5
TPM1-232ENST00000561425 AMOTL2Q9Y2J4 779 aa30.69■■■□□ 2.5
TPM1-232ENST00000561425 CCDC144AA2RUR9 1427 aa30.69■■■□□ 2.5
TPM1-232ENST00000561425 SPATA31E1Q6ZUB1 1445 aa30.68■■■□□ 2.5
TPM1-232ENST00000561425 METP08581 1390 aa30.66■■■□□ 2.5
TPM1-232ENST00000561425 FAM135BQ49AJ0 1406 aa30.65■■■□□ 2.5
TPM1-232ENST00000561425 MSH6P52701 1360 aa30.62■■■□□ 2.49
TPM1-232ENST00000561425 XRN1Q8IZH2 1706 aaKnown RBP30.59■■■□□ 2.49
TPM1-232ENST00000561425 PPLO60437 1756 aa30.58■■■□□ 2.49
TPM1-232ENST00000561425 C19orf44Q9H6X5 657 aa30.57■■■□□ 2.48
TPM1-232ENST00000561425 ANKRD30BQ9BXX2 1392 aa30.55■■■□□ 2.48
TPM1-232ENST00000561425 RGL3Q3MIN7 710 aa30.55■■■□□ 2.48
TPM1-232ENST00000561425 SLAIN2Q9P270 581 aa30.55■■■□□ 2.48
TPM1-232ENST00000561425 ADGRF5Q8IZF2 1346 aa30.53■■■□□ 2.48
TPM1-232ENST00000561425 PRAG1Q86YV5 1406 aa30.52■■■□□ 2.48
TPM1-232ENST00000561425 SETD1AO15047 1707 aaKnown RBP30.52■■■□□ 2.48
TPM1-232ENST00000561425 CADPS2Q86UW7 1296 aa30.49■■■□□ 2.47
TPM1-232ENST00000561425 DISP3Q9P2K9 1392 aa30.46■■■□□ 2.47
TPM1-232ENST00000561425 C14orf37Q86TY3 774 aa30.46■■■□□ 2.47
TPM1-232ENST00000561425 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.46■■■□□ 2.47
TPM1-232ENST00000561425 IFT172Q9UG01 1749 aa30.46■■■□□ 2.47
TPM1-232ENST00000561425 DCCP43146 1447 aa30.46■■■□□ 2.47
TPM1-232ENST00000561425 PTCH1Q13635 1447 aa30.44■■■□□ 2.46
TPM1-232ENST00000561425 ROBO1Q9Y6N7 1651 aa30.43■■■□□ 2.46
TPM1-232ENST00000561425 PIK3C2GO75747 1445 aa30.43■■■□□ 2.46
TPM1-232ENST00000561425 ATF3P18847 181 aa30.43■■■□□ 2.46
TPM1-232ENST00000561425 ROBO2Q9HCK4 1378 aa30.41■■■□□ 2.46
TPM1-232ENST00000561425 NRXN1Q9ULB1 1477 aa30.41■■■□□ 2.46
TPM1-232ENST00000561425 ADGRL3Q9HAR2 1447 aa30.39■■■□□ 2.46
TPM1-232ENST00000561425 MYOM2P54296 1465 aa30.38■■■□□ 2.45
TPM1-232ENST00000561425 C14orf93Q9H972 538 aaKnown RBP30.37■■■□□ 2.45
TPM1-232ENST00000561425 TECPR2O15040 1411 aa30.34■■■□□ 2.45
TPM1-232ENST00000561425 MST1RQ04912 1400 aa30.33■■■□□ 2.45
TPM1-232ENST00000561425 LRPPRCP42704 1394 aaKnown RBP30.33■■■□□ 2.45
TPM1-232ENST00000561425 ABCC11Q96J66 1382 aa30.33■■■□□ 2.45
TPM1-232ENST00000561425 MED1Q15648 1581 aaPredicted RBP30.32■■■□□ 2.45
TPM1-232ENST00000561425 ASXL1Q8IXJ9 1541 aa30.32■■■□□ 2.44
TPM1-232ENST00000561425 BRINP3Q76B58 766 aa30.31■■■□□ 2.44
TPM1-232ENST00000561425 STAC3Q96MF2 364 aa30.31■■■□□ 2.44
TPM1-232ENST00000561425 TMEM132EQ6IEE7 984 aa30.29■■■□□ 2.44
TPM1-232ENST00000561425 NALCNQ8IZF0 1738 aa30.28■■■□□ 2.44
TPM1-232ENST00000561425 ILDR2Q71H61 639 aa30.28■■■□□ 2.44
TPM1-232ENST00000561425 SIRT1Q96EB6 747 aa30.28■■■□□ 2.44
TPM1-232ENST00000561425 CFAP70Q5T0N1 1121 aa30.26■■■□□ 2.43
TPM1-232ENST00000561425 AHDC1Q5TGY3 1603 aaPredicted RBP30.25■■■□□ 2.43
TPM1-232ENST00000561425 DHX57Q6P158 1386 aaKnown RBP30.25■■■□□ 2.43
TPM1-232ENST00000561425 YTHDC2Q9H6S0 1430 aaKnown RBP30.24■■■□□ 2.43
TPM1-232ENST00000561425 STK26Q9P289 416 aa30.23■■■□□ 2.43
TPM1-232ENST00000561425 COL16A1Q07092 1604 aaPredicted RBP30.22■■■□□ 2.43
TPM1-232ENST00000561425 PHLPP1O60346 1717 aa30.22■■■□□ 2.43
TPM1-232ENST00000561425 DCAF11Q8TEB1 546 aa30.21■■■□□ 2.43
TPM1-232ENST00000561425 C1orf167Q5SNV9 1468 aa30.2■■■□□ 2.43
TPM1-232ENST00000561425 JCADQ9P266 1359 aa30.2■■■□□ 2.43
TPM1-232ENST00000561425 WAPLQ7Z5K2 1190 aa30.2■■■□□ 2.43
TPM1-232ENST00000561425 KNDC1Q76NI1 1749 aa30.19■■■□□ 2.42
TPM1-232ENST00000561425 LAMC1P11047 1609 aa30.19■■■□□ 2.42
TPM1-232ENST00000561425 PLEKHH1Q9ULM0 1364 aa30.16■■■□□ 2.42
TPM1-232ENST00000561425 KDM2AQ9Y2K7 1162 aa30.15■■■□□ 2.42
TPM1-232ENST00000561425 ADGRB1O14514 1584 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms