RNA–Protein interactions for RNA: ENST00000561405.1

UBE2CP4-201, Transcript of ubiquitin conjugating enzyme E2 C pseudogene 4, humanhuman

BASIC

Gene UBE2CP4, Length 535 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2CP4-201ENST00000561405 IQGAP3Q86VI3 1631 aa11.31□□□□□ -0.6
UBE2CP4-201ENST00000561405 PIK3C2BO00750 1634 aa11.3□□□□□ -0.6
UBE2CP4-201ENST00000561405 ITGAEP38570 1179 aa11.29□□□□□ -0.6
UBE2CP4-201ENST00000561405 IDI1Q13907 227 aa11.29□□□□□ -0.6
UBE2CP4-201ENST00000561405 SLC52A1Q9NWF4 448 aa11.29□□□□□ -0.6
UBE2CP4-201ENST00000561405 ZNF335Q9H4Z2 1342 aaPredicted RBP11.29□□□□□ -0.6
UBE2CP4-201ENST00000561405 NPHP4O75161 1426 aaPredicted RBP11.28□□□□□ -0.6
UBE2CP4-201ENST00000561405 NAIPQ13075 1403 aa11.28□□□□□ -0.6
UBE2CP4-201ENST00000561405 E9PCH4 1651 aa11.27□□□□□ -0.6
UBE2CP4-201ENST00000561405 IQGAP1P46940 1657 aa11.27□□□□□ -0.6
UBE2CP4-201ENST00000561405 SCAF11Q99590 1463 aaKnown RBP11.27□□□□□ -0.6
UBE2CP4-201ENST00000561405 NUP155O75694 1391 aa11.27□□□□□ -0.61
UBE2CP4-201ENST00000561405 TMEM2Q9UHN6 1383 aa11.27□□□□□ -0.61
UBE2CP4-201ENST00000561405 HFM1A2PYH4 1435 aa11.26□□□□□ -0.61
UBE2CP4-201ENST00000561405 LTKP29376 864 aa11.26□□□□□ -0.61
UBE2CP4-201ENST00000561405 ADGRB3O60242 1522 aa11.25□□□□□ -0.61
UBE2CP4-201ENST00000561405 ZNF219Q9P2Y4 722 aaPredicted RBP11.25□□□□□ -0.61
UBE2CP4-201ENST00000561405 CPS1P31327 1500 aa11.25□□□□□ -0.61
UBE2CP4-201ENST00000561405 TXNDC2Q86VQ3 553 aa11.23□□□□□ -0.61
UBE2CP4-201ENST00000561405 EID1Q9Y6B2 187 aa11.23□□□□□ -0.61
UBE2CP4-201ENST00000561405 TMEM131LA2VDJ0 1609 aa11.23□□□□□ -0.61
UBE2CP4-201ENST00000561405 ZFYVE9O95405 1425 aa11.22□□□□□ -0.61
UBE2CP4-201ENST00000561405 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
UBE2CP4-201ENST00000561405 MYO5BQ9ULV0 1848 aa11.21□□□□□ -0.61
UBE2CP4-201ENST00000561405 DSG3P32926 999 aa11.21□□□□□ -0.61
UBE2CP4-201ENST00000561405 STRCP1A6NGW2 1772 aa11.21□□□□□ -0.62
UBE2CP4-201ENST00000561405 SPHKAPQ2M3C7 1700 aa11.19□□□□□ -0.62
UBE2CP4-201ENST00000561405 RIMS2Q9UQ26 1411 aa11.18□□□□□ -0.62
UBE2CP4-201ENST00000561405 PLEKHG1Q9ULL1 1385 aa11.17□□□□□ -0.62
UBE2CP4-201ENST00000561405 LRRC7Q96NW7 1537 aa11.17□□□□□ -0.62
UBE2CP4-201ENST00000561405 TRPM2O94759 1503 aa11.16□□□□□ -0.62
UBE2CP4-201ENST00000561405 HDGFP51858 240 aaKnown RBP11.16□□□□□ -0.62
UBE2CP4-201ENST00000561405 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.15□□□□□ -0.62
UBE2CP4-201ENST00000561405 ALKQ9UM73 1620 aa11.14□□□□□ -0.63
UBE2CP4-201ENST00000561405 UBAP1LF5GYI3 381 aa11.14□□□□□ -0.63
UBE2CP4-201ENST00000561405 ABCB7O75027 752 aa11.14□□□□□ -0.63
UBE2CP4-201ENST00000561405 KCNA6P17658 529 aa11.14□□□□□ -0.63
UBE2CP4-201ENST00000561405 NWD1Q149M9 1564 aa11.14□□□□□ -0.63
UBE2CP4-201ENST00000561405 CLTCL1P53675 1640 aa11.13□□□□□ -0.63
UBE2CP4-201ENST00000561405 XIRP1Q702N8 1843 aaKnown RBP11.13□□□□□ -0.63
UBE2CP4-201ENST00000561405 ACIN1Q9UKV3 1341 aaKnown RBP11.12□□□□□ -0.63
UBE2CP4-201ENST00000561405 ADAMTS13Q76LX8 1427 aa11.12□□□□□ -0.63
UBE2CP4-201ENST00000561405 TOM1O60784 492 aa11.12□□□□□ -0.63
UBE2CP4-201ENST00000561405 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
UBE2CP4-201ENST00000561405 TRIM52Q96A61 297 aa11.12□□□□□ -0.63
UBE2CP4-201ENST00000561405 SLC26A8Q96RN1 970 aa11.12□□□□□ -0.63
UBE2CP4-201ENST00000561405 TBX22Q9Y458 520 aa11.12□□□□□ -0.63
UBE2CP4-201ENST00000561405 NKTRP30414 1462 aaKnown RBP11.12□□□□□ -0.63
UBE2CP4-201ENST00000561405 CHD2O14647 1828 aaKnown RBP11.12□□□□□ -0.63
UBE2CP4-201ENST00000561405 DIP2AQ14689 1571 aa11.11□□□□□ -0.63
UBE2CP4-201ENST00000561405 SETD5Q9C0A6 1442 aa11.1□□□□□ -0.63
UBE2CP4-201ENST00000561405 KIF1BO60333 1816 aa11.1□□□□□ -0.63
UBE2CP4-201ENST00000561405 PPP1R15AO75807 674 aaPredicted RBP11.1□□□□□ -0.63
UBE2CP4-201ENST00000561405 PIK3R4Q99570 1358 aa11.1□□□□□ -0.63
UBE2CP4-201ENST00000561405 NEXMIFQ5QGS0 1516 aa11.09□□□□□ -0.63
UBE2CP4-201ENST00000561405 SETBP1Q9Y6X0 1596 aa11.09□□□□□ -0.63
UBE2CP4-201ENST00000561405 POLA2Q14181 598 aa11.09□□□□□ -0.63
UBE2CP4-201ENST00000561405 NRXN3Q9Y4C0 1643 aa11.09□□□□□ -0.63
UBE2CP4-201ENST00000561405 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
UBE2CP4-201ENST00000561405 MPHOSPH9Q99550 1183 aa11.08□□□□□ -0.64
UBE2CP4-201ENST00000561405 NUTM2DQ5VT03 806 aaPredicted RBP11.07□□□□□ -0.64
UBE2CP4-201ENST00000561405 NCOA3Q9Y6Q9 1424 aa11.07□□□□□ -0.64
UBE2CP4-201ENST00000561405 BCANQ96GW7 911 aa11.06□□□□□ -0.64
UBE2CP4-201ENST00000561405 RPGRIP1LQ68CZ1 1315 aa11.06□□□□□ -0.64
UBE2CP4-201ENST00000561405 RAB3GAP2Q9H2M9 1393 aa11.05□□□□□ -0.64
UBE2CP4-201ENST00000561405 HRCP23327 699 aa11.05□□□□□ -0.64
UBE2CP4-201ENST00000561405 ZNF326Q5BKZ1 582 aaKnown RBP11.05□□□□□ -0.64
UBE2CP4-201ENST00000561405 PROSER2Q86WR7 435 aaPredicted RBP11.05□□□□□ -0.64
UBE2CP4-201ENST00000561405 PTPRUQ92729 1446 aa11.05□□□□□ -0.64
UBE2CP4-201ENST00000561405 SPATA31E1Q6ZUB1 1445 aa11.04□□□□□ -0.64
UBE2CP4-201ENST00000561405 PIP4K2BP78356 416 aa11.04□□□□□ -0.64
UBE2CP4-201ENST00000561405 XRN1Q8IZH2 1706 aaKnown RBP11.04□□□□□ -0.64
UBE2CP4-201ENST00000561405 PPLO60437 1756 aa11.03□□□□□ -0.64
UBE2CP4-201ENST00000561405 CCDC144AA2RUR9 1427 aa11.03□□□□□ -0.64
UBE2CP4-201ENST00000561405 FAM135BQ49AJ0 1406 aa11.03□□□□□ -0.64
UBE2CP4-201ENST00000561405 SETD1AO15047 1707 aaKnown RBP11.02□□□□□ -0.65
UBE2CP4-201ENST00000561405 VGFO15240 615 aaPredicted RBP11.02□□□□□ -0.65
UBE2CP4-201ENST00000561405 HSPA1LP34931 641 aa11.02□□□□□ -0.65
UBE2CP4-201ENST00000561405 METP08581 1390 aa11.02□□□□□ -0.65
UBE2CP4-201ENST00000561405 AMOTL2Q9Y2J4 779 aa11.01□□□□□ -0.65
UBE2CP4-201ENST00000561405 MSH6P52701 1360 aa11.01□□□□□ -0.65
UBE2CP4-201ENST00000561405 PRAG1Q86YV5 1406 aa11.01□□□□□ -0.65
UBE2CP4-201ENST00000561405 RBM33Q96EV2 1170 aaKnown RBP11□□□□□ -0.65
UBE2CP4-201ENST00000561405 IFT172Q9UG01 1749 aa10.99□□□□□ -0.65
UBE2CP4-201ENST00000561405 ANKRD30BQ9BXX2 1392 aa10.99□□□□□ -0.65
UBE2CP4-201ENST00000561405 C19orf44Q9H6X5 657 aa10.98□□□□□ -0.65
UBE2CP4-201ENST00000561405 DCCP43146 1447 aa10.98□□□□□ -0.65
UBE2CP4-201ENST00000561405 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
UBE2CP4-201ENST00000561405 PTCH1Q13635 1447 aa10.97□□□□□ -0.65
UBE2CP4-201ENST00000561405 ROBO1Q9Y6N7 1651 aa10.97□□□□□ -0.65
UBE2CP4-201ENST00000561405 ADGRF5Q8IZF2 1346 aa10.96□□□□□ -0.65
UBE2CP4-201ENST00000561405 SOCS7O14512 581 aa10.96□□□□□ -0.65
UBE2CP4-201ENST00000561405 SLAIN2Q9P270 581 aa10.96□□□□□ -0.65
UBE2CP4-201ENST00000561405 NRXN1Q9ULB1 1477 aa10.95□□□□□ -0.66
UBE2CP4-201ENST00000561405 PIK3C2GO75747 1445 aa10.95□□□□□ -0.66
UBE2CP4-201ENST00000561405 CADPS2Q86UW7 1296 aa10.95□□□□□ -0.66
UBE2CP4-201ENST00000561405 ADGRL3Q9HAR2 1447 aa10.94□□□□□ -0.66
UBE2CP4-201ENST00000561405 DISP3Q9P2K9 1392 aa10.94□□□□□ -0.66
UBE2CP4-201ENST00000561405 RGL3Q3MIN7 710 aa10.94□□□□□ -0.66
UBE2CP4-201ENST00000561405 MYOM2P54296 1465 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms