RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-215ENST00000560982 TMEM131LA2VDJ0 1609 aa21.41■■□□□ 1.02
USP8-215ENST00000560982 KCNA6P17658 529 aa21.39■■□□□ 1.01
USP8-215ENST00000560982 BCANQ96GW7 911 aa21.39■■□□□ 1.01
USP8-215ENST00000560982 ZFYVE9O95405 1425 aa21.38■■□□□ 1.01
USP8-215ENST00000560982 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
USP8-215ENST00000560982 RIMS2Q9UQ26 1411 aa21.38■■□□□ 1.01
USP8-215ENST00000560982 NUP155O75694 1391 aa21.36■■□□□ 1.01
USP8-215ENST00000560982 TMEM94Q12767 1356 aa21.36■■□□□ 1.01
USP8-215ENST00000560982 NWD1Q149M9 1564 aa21.36■■□□□ 1.01
USP8-215ENST00000560982 PPP1R15AO75807 674 aaPredicted RBP21.35■■□□□ 1.01
USP8-215ENST00000560982 CHGAP10645 457 aaKnown RBP21.35■■□□□ 1.01
USP8-215ENST00000560982 PLEKHG1Q9ULL1 1385 aa21.35■■□□□ 1.01
USP8-215ENST00000560982 NKTRP30414 1462 aaKnown RBP21.34■■□□□ 1.01
USP8-215ENST00000560982 HDGFP51858 240 aaKnown RBP21.34■■□□□ 1.01
USP8-215ENST00000560982 PROSER2Q86WR7 435 aaPredicted RBP21.34■■□□□ 1.01
USP8-215ENST00000560982 RBM33Q96EV2 1170 aaKnown RBP21.31■■□□□ 1
USP8-215ENST00000560982 CHD2O14647 1828 aaKnown RBP21.31■■□□□ 1
USP8-215ENST00000560982 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.3■■□□□ 1
USP8-215ENST00000560982 FAM135BQ49AJ0 1406 aa21.28■■□□□ 1
USP8-215ENST00000560982 SPHKAPQ2M3C7 1700 aa21.27■■□□□ 1
USP8-215ENST00000560982 RRBP1Q9P2E9 1410 aaKnown RBP21.27■■□□□ 1
USP8-215ENST00000560982 ROBO1Q9Y6N7 1651 aa21.26■□□□□ 0.99
USP8-215ENST00000560982 NUTM2DQ5VT03 806 aaPredicted RBP21.26■□□□□ 0.99
USP8-215ENST00000560982 PHF23Q9BUL5 403 aaPredicted RBP21.26■□□□□ 0.99
USP8-215ENST00000560982 MSH6P52701 1360 aa21.25■□□□□ 0.99
USP8-215ENST00000560982 DIP2AQ14689 1571 aa21.25■□□□□ 0.99
USP8-215ENST00000560982 TBX22Q9Y458 520 aa21.25■□□□□ 0.99
USP8-215ENST00000560982 ADAMTS13Q76LX8 1427 aa21.24■□□□□ 0.99
USP8-215ENST00000560982 PIK3R4Q99570 1358 aa21.19■□□□□ 0.98
USP8-215ENST00000560982 NAIPQ13075 1403 aa21.19■□□□□ 0.98
USP8-215ENST00000560982 TRPM2O94759 1503 aa21.19■□□□□ 0.98
USP8-215ENST00000560982 SLAIN2Q9P270 581 aa21.17■□□□□ 0.98
USP8-215ENST00000560982 NCOA3Q9Y6Q9 1424 aa21.17■□□□□ 0.98
USP8-215ENST00000560982 CLTCL1P53675 1640 aa21.15■□□□□ 0.98
USP8-215ENST00000560982 ZNF326Q5BKZ1 582 aaKnown RBP21.15■□□□□ 0.98
USP8-215ENST00000560982 C14orf37Q86TY3 774 aa21.15■□□□□ 0.98
USP8-215ENST00000560982 NRXN3Q9Y4C0 1643 aa21.15■□□□□ 0.98
USP8-215ENST00000560982 PHLPP1O60346 1717 aa21.14■□□□□ 0.97
USP8-215ENST00000560982 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.13■□□□□ 0.97
USP8-215ENST00000560982 SETBP1Q9Y6X0 1596 aa21.13■□□□□ 0.97
USP8-215ENST00000560982 HFM1A2PYH4 1435 aa21.12■□□□□ 0.97
USP8-215ENST00000560982 PTPRUQ92729 1446 aa21.12■□□□□ 0.97
USP8-215ENST00000560982 KIF1BO60333 1816 aa21.11■□□□□ 0.97
USP8-215ENST00000560982 AMOTL2Q9Y2J4 779 aa21.11■□□□□ 0.97
USP8-215ENST00000560982 XRN1Q8IZH2 1706 aaKnown RBP21.09■□□□□ 0.97
USP8-215ENST00000560982 NEXMIFQ5QGS0 1516 aa21.09■□□□□ 0.97
USP8-215ENST00000560982 TRIM52Q96A61 297 aa21.09■□□□□ 0.97
USP8-215ENST00000560982 C19orf44Q9H6X5 657 aa21.09■□□□□ 0.97
USP8-215ENST00000560982 CADPS2Q86UW7 1296 aa21.08■□□□□ 0.97
USP8-215ENST00000560982 ATF3P18847 181 aa21.07■□□□□ 0.96
USP8-215ENST00000560982 RGS17Q9UGC6 210 aaPredicted RBP21.07■□□□□ 0.96
USP8-215ENST00000560982 COL16A1Q07092 1604 aaPredicted RBP21.06■□□□□ 0.96
USP8-215ENST00000560982 METP08581 1390 aa21.04■□□□□ 0.96
USP8-215ENST00000560982 JCADQ9P266 1359 aa21.04■□□□□ 0.96
USP8-215ENST00000560982 SLC4A1APQ9BWU0 796 aaKnown RBP21.03■□□□□ 0.96
USP8-215ENST00000560982 AHDC1Q5TGY3 1603 aaPredicted RBP21.02■□□□□ 0.96
USP8-215ENST00000560982 DCCP43146 1447 aa21.02■□□□□ 0.96
USP8-215ENST00000560982 VGFO15240 615 aaPredicted RBP20.97■□□□□ 0.95
USP8-215ENST00000560982 SETD1AO15047 1707 aaKnown RBP20.96■□□□□ 0.95
USP8-215ENST00000560982 NALCNQ8IZF0 1738 aa20.96■□□□□ 0.95
USP8-215ENST00000560982 PPLO60437 1756 aa20.96■□□□□ 0.95
USP8-215ENST00000560982 POTEAQ6S8J7 498 aa20.96■□□□□ 0.95
USP8-215ENST00000560982 BRINP3Q76B58 766 aa20.96■□□□□ 0.95
USP8-215ENST00000560982 SHPRHQ149N8 1683 aa20.96■□□□□ 0.95
USP8-215ENST00000560982 RPGRIP1LQ68CZ1 1315 aa20.95■□□□□ 0.94
USP8-215ENST00000560982 MST1RQ04912 1400 aa20.95■□□□□ 0.94
USP8-215ENST00000560982 ADGRL3Q9HAR2 1447 aa20.95■□□□□ 0.94
USP8-215ENST00000560982 ASXL1Q8IXJ9 1541 aa20.94■□□□□ 0.94
USP8-215ENST00000560982 SPATA31A6Q5VVP1 1343 aa20.94■□□□□ 0.94
USP8-215ENST00000560982 FOXD1Q16676 465 aa20.93■□□□□ 0.94
USP8-215ENST00000560982 LRP6O75581 1613 aa20.93■□□□□ 0.94
USP8-215ENST00000560982 PTCH1Q13635 1447 aa20.91■□□□□ 0.94
USP8-215ENST00000560982 NHSL1Q5SYE7 1610 aa20.91■□□□□ 0.94
USP8-215ENST00000560982 CCDC144AA2RUR9 1427 aa20.88■□□□□ 0.93
USP8-215ENST00000560982 MEX3CQ5U5Q3 659 aaKnown RBP20.88■□□□□ 0.93
USP8-215ENST00000560982 ROBO2Q9HCK4 1378 aa20.87■□□□□ 0.93
USP8-215ENST00000560982 MPHOSPH9Q99550 1183 aa20.86■□□□□ 0.93
USP8-215ENST00000560982 PRAG1Q86YV5 1406 aa20.86■□□□□ 0.93
USP8-215ENST00000560982 SETD5Q9C0A6 1442 aa20.86■□□□□ 0.93
USP8-215ENST00000560982 IFT172Q9UG01 1749 aa20.84■□□□□ 0.93
USP8-215ENST00000560982 C1orf167Q5SNV9 1468 aa20.83■□□□□ 0.93
USP8-215ENST00000560982 SPATA31E1Q6ZUB1 1445 aa20.83■□□□□ 0.93
USP8-215ENST00000560982 NUTM2BA6NNL0 878 aaPredicted RBP20.82■□□□□ 0.92
USP8-215ENST00000560982 NUTM2EB1AL46 878 aaPredicted RBP20.82■□□□□ 0.92
USP8-215ENST00000560982 RGL3Q3MIN7 710 aa20.82■□□□□ 0.92
USP8-215ENST00000560982 NUTM2AQ8IVF1 878 aaPredicted RBP20.82■□□□□ 0.92
USP8-215ENST00000560982 DDX17Q92841 729 aaKnown RBP20.82■□□□□ 0.92
USP8-215ENST00000560982 LRRC59Q96AG4 307 aaKnown RBP20.82■□□□□ 0.92
USP8-215ENST00000560982 ADGRF5Q8IZF2 1346 aa20.81■□□□□ 0.92
USP8-215ENST00000560982 ZNF772Q68DY9 489 aaPredicted RBP20.8■□□□□ 0.92
USP8-215ENST00000560982 ANKRD30BQ9BXX2 1392 aa20.79■□□□□ 0.92
USP8-215ENST00000560982 LAMC1P11047 1609 aa20.78■□□□□ 0.92
USP8-215ENST00000560982 ACIN1Q9UKV3 1341 aaKnown RBP20.78■□□□□ 0.92
USP8-215ENST00000560982 PNPLA6Q8IY17 1366 aa20.77■□□□□ 0.92
USP8-215ENST00000560982 ORAI2Q96SN7 254 aa20.76■□□□□ 0.91
USP8-215ENST00000560982 CDC42BPGQ6DT37 1551 aa20.76■□□□□ 0.91
USP8-215ENST00000560982 PIK3C2GO75747 1445 aa20.74■□□□□ 0.91
USP8-215ENST00000560982 KNDC1Q76NI1 1749 aa20.74■□□□□ 0.91
USP8-215ENST00000560982 STK26Q9P289 416 aa20.74■□□□□ 0.91
USP8-215ENST00000560982 TECPR2O15040 1411 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms