RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 MYO5BQ9ULV0 1848 aa15.78■□□□□ 0.12
TPM1-225ENST00000560679 ZFYVE9O95405 1425 aa15.77■□□□□ 0.12
TPM1-225ENST00000560679 KANK1Q14678 1352 aa15.77■□□□□ 0.12
TPM1-225ENST00000560679 SLAIN2Q9P270 581 aa15.75■□□□□ 0.11
TPM1-225ENST00000560679 SHPRHQ149N8 1683 aa15.75■□□□□ 0.11
TPM1-225ENST00000560679 GCC2Q8IWJ2 1684 aa15.75■□□□□ 0.11
TPM1-225ENST00000560679 AHDC1Q5TGY3 1603 aaPredicted RBP15.75■□□□□ 0.11
TPM1-225ENST00000560679 FGD6Q6ZV73 1430 aa15.73■□□□□ 0.11
TPM1-225ENST00000560679 PLEKHG1Q9ULL1 1385 aa15.73■□□□□ 0.11
TPM1-225ENST00000560679 TMEM131LA2VDJ0 1609 aa15.72■□□□□ 0.11
TPM1-225ENST00000560679 DIP2AQ14689 1571 aa15.72■□□□□ 0.11
TPM1-225ENST00000560679 UPF1Q92900 1129 aaKnown RBP eCLIP15.72■□□□□ 0.11
TPM1-225ENST00000560679 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.71■□□□□ 0.11
TPM1-225ENST00000560679 RIMS2Q9UQ26 1411 aa15.7■□□□□ 0.1
TPM1-225ENST00000560679 RPRD2Q5VT52 1461 aaKnown RBP15.7■□□□□ 0.1
TPM1-225ENST00000560679 SPATA31A6Q5VVP1 1343 aa15.69■□□□□ 0.1
TPM1-225ENST00000560679 ANKRD30AQ9BXX3 1397 aa15.69■□□□□ 0.1
TPM1-225ENST00000560679 ADGRL2O95490 1459 aa15.69■□□□□ 0.1
TPM1-225ENST00000560679 NCOA3Q9Y6Q9 1424 aa15.68■□□□□ 0.1
TPM1-225ENST00000560679 SRCAPQ6ZRS2 3230 aa15.68■□□□□ 0.1
TPM1-225ENST00000560679 SLC52A1Q9NWF4 448 aa15.68■□□□□ 0.1
TPM1-225ENST00000560679 ADAMTS13Q76LX8 1427 aa15.68■□□□□ 0.1
TPM1-225ENST00000560679 TRIM52Q96A61 297 aa15.67■□□□□ 0.1
TPM1-225ENST00000560679 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
TPM1-225ENST00000560679 BCANQ96GW7 911 aa15.66■□□□□ 0.1
TPM1-225ENST00000560679 CDK12Q9NYV4 1490 aaPredicted RBP15.65■□□□□ 0.1
TPM1-225ENST00000560679 ZNF772Q68DY9 489 aaPredicted RBP15.65■□□□□ 0.1
TPM1-225ENST00000560679 MEX3CQ5U5Q3 659 aaKnown RBP15.64■□□□□ 0.09
TPM1-225ENST00000560679 TBX22Q9Y458 520 aa15.63■□□□□ 0.09
TPM1-225ENST00000560679 UNC13BO14795 1591 aa15.62■□□□□ 0.09
TPM1-225ENST00000560679 PPP1R15AO75807 674 aaPredicted RBP15.62■□□□□ 0.09
TPM1-225ENST00000560679 ASXL1Q8IXJ9 1541 aa15.62■□□□□ 0.09
TPM1-225ENST00000560679 NHSL1Q5SYE7 1610 aa15.61■□□□□ 0.09
TPM1-225ENST00000560679 PTPRUQ92729 1446 aa15.61■□□□□ 0.09
TPM1-225ENST00000560679 E9PCH4 1651 aa15.61■□□□□ 0.09
TPM1-225ENST00000560679 CADPS2Q86UW7 1296 aa15.61■□□□□ 0.09
TPM1-225ENST00000560679 ANKRD50Q9ULJ7 1429 aa15.6■□□□□ 0.09
TPM1-225ENST00000560679 XRN1Q8IZH2 1706 aaKnown RBP15.6■□□□□ 0.09
TPM1-225ENST00000560679 TRPM2O94759 1503 aa15.6■□□□□ 0.09
TPM1-225ENST00000560679 LOC105371045A0A1W2PR82 267 aa15.6■□□□□ 0.09
TPM1-225ENST00000560679 BRINP3Q76B58 766 aa15.6■□□□□ 0.09
TPM1-225ENST00000560679 NRXN3Q9Y4C0 1643 aa15.6■□□□□ 0.09
TPM1-225ENST00000560679 PIK3R4Q99570 1358 aa15.6■□□□□ 0.09
TPM1-225ENST00000560679 RGS12O14924 1447 aa15.6■□□□□ 0.09
TPM1-225ENST00000560679 RXRBP28702 533 aa15.59■□□□□ 0.09
TPM1-225ENST00000560679 C14orf37Q86TY3 774 aa15.59■□□□□ 0.09
TPM1-225ENST00000560679 C19orf44Q9H6X5 657 aa15.59■□□□□ 0.09
TPM1-225ENST00000560679 DCCP43146 1447 aa15.59■□□□□ 0.09
TPM1-225ENST00000560679 SETD5Q9C0A6 1442 aa15.58■□□□□ 0.08
TPM1-225ENST00000560679 ATF3P18847 181 aa15.57■□□□□ 0.08
TPM1-225ENST00000560679 NUTM2DQ5VT03 806 aaPredicted RBP15.57■□□□□ 0.08
TPM1-225ENST00000560679 AFF2P51816 1311 aa15.57■□□□□ 0.08
TPM1-225ENST00000560679 MST1RQ04912 1400 aa15.56■□□□□ 0.08
TPM1-225ENST00000560679 IQGAP3Q86VI3 1631 aa15.55■□□□□ 0.08
TPM1-225ENST00000560679 NUTM2BA6NNL0 878 aaPredicted RBP15.55■□□□□ 0.08
TPM1-225ENST00000560679 NUTM2EB1AL46 878 aaPredicted RBP15.55■□□□□ 0.08
TPM1-225ENST00000560679 NUTM2AQ8IVF1 878 aaPredicted RBP15.55■□□□□ 0.08
TPM1-225ENST00000560679 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.55■□□□□ 0.08
TPM1-225ENST00000560679 SETBP1Q9Y6X0 1596 aa15.54■□□□□ 0.08
TPM1-225ENST00000560679 HDGFP51858 240 aaKnown RBP15.54■□□□□ 0.08
TPM1-225ENST00000560679 NALCNQ8IZF0 1738 aa15.52■□□□□ 0.08
TPM1-225ENST00000560679 CHGAP10645 457 aaKnown RBP15.52■□□□□ 0.08
TPM1-225ENST00000560679 AMOTL2Q9Y2J4 779 aa15.52■□□□□ 0.08
TPM1-225ENST00000560679 PNPLA6Q8IY17 1366 aa15.51■□□□□ 0.07
TPM1-225ENST00000560679 EP400Q96L91 3159 aa15.5■□□□□ 0.07
TPM1-225ENST00000560679 LAMC1P11047 1609 aa15.49■□□□□ 0.07
TPM1-225ENST00000560679 ADGRL3Q9HAR2 1447 aa15.49■□□□□ 0.07
TPM1-225ENST00000560679 DDX17Q92841 729 aaKnown RBP15.48■□□□□ 0.07
TPM1-225ENST00000560679 C8orf37Q96NL8 207 aa15.48■□□□□ 0.07
TPM1-225ENST00000560679 METP08581 1390 aa15.47■□□□□ 0.07
TPM1-225ENST00000560679 RBM6P78332 1123 aaKnown RBP15.46■□□□□ 0.07
TPM1-225ENST00000560679 APLP2Q06481 763 aa15.46■□□□□ 0.07
TPM1-225ENST00000560679 FAM50AQ14320 339 aaKnown RBP15.46■□□□□ 0.07
TPM1-225ENST00000560679 QTRT2Q9H974 415 aaKnown RBP15.46■□□□□ 0.07
TPM1-225ENST00000560679 LRRC59Q96AG4 307 aaKnown RBP15.45■□□□□ 0.06
TPM1-225ENST00000560679 SPHKAPQ2M3C7 1700 aa15.45■□□□□ 0.06
TPM1-225ENST00000560679 NEXMIFQ5QGS0 1516 aa15.43■□□□□ 0.06
TPM1-225ENST00000560679 C1orf167Q5SNV9 1468 aa15.43■□□□□ 0.06
TPM1-225ENST00000560679 ROCK1Q13464 1354 aa15.42■□□□□ 0.06
TPM1-225ENST00000560679 ATAD2Q6PL18 1390 aa15.42■□□□□ 0.06
TPM1-225ENST00000560679 CLTCL1P53675 1640 aa15.4■□□□□ 0.06
TPM1-225ENST00000560679 COL22A1Q8NFW1 1626 aaPredicted RBP15.4■□□□□ 0.06
TPM1-225ENST00000560679 ADAMTS2O95450 1211 aa15.4■□□□□ 0.06
TPM1-225ENST00000560679 NUP155O75694 1391 aa15.39■□□□□ 0.05
TPM1-225ENST00000560679 ATRNO75882 1429 aa15.39■□□□□ 0.05
TPM1-225ENST00000560679 PTCH1Q13635 1447 aa15.38■□□□□ 0.05
TPM1-225ENST00000560679 NGLY1Q96IV0 654 aa15.37■□□□□ 0.05
TPM1-225ENST00000560679 MYOM2P54296 1465 aa15.37■□□□□ 0.05
TPM1-225ENST00000560679 SOS2Q07890 1332 aaPredicted RBP15.37■□□□□ 0.05
TPM1-225ENST00000560679 PRAG1Q86YV5 1406 aa15.35■□□□□ 0.05
TPM1-225ENST00000560679 FNBP4Q8N3X1 1017 aaPredicted RBP15.35■□□□□ 0.05
TPM1-225ENST00000560679 USP21Q9UK80 565 aa15.35■□□□□ 0.05
TPM1-225ENST00000560679 MARF1Q9Y4F3 1742 aaKnown RBP15.34■□□□□ 0.05
TPM1-225ENST00000560679 TRPC5Q9UL62 973 aaPredicted RBP15.34■□□□□ 0.05
TPM1-225ENST00000560679 ROBO2Q9HCK4 1378 aa15.34■□□□□ 0.05
TPM1-225ENST00000560679 ZNF326Q5BKZ1 582 aaKnown RBP15.33■□□□□ 0.04
TPM1-225ENST00000560679 ORAI2Q96SN7 254 aa15.33■□□□□ 0.04
TPM1-225ENST00000560679 BCL9LQ86UU0 1499 aa15.33■□□□□ 0.04
TPM1-225ENST00000560679 PXDNQ92626 1479 aa15.32■□□□□ 0.04
TPM1-225ENST00000560679 ZRANB1Q9UGI0 708 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms