RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 RPRD2Q5VT52 1461 aaKnown RBP18.71■□□□□ 0.59
MARK3-221ENST00000560603 PPP1R15AO75807 674 aaPredicted RBP18.69■□□□□ 0.58
MARK3-221ENST00000560603 FAM50AQ14320 339 aaKnown RBP18.68■□□□□ 0.58
MARK3-221ENST00000560603 RBM33Q96EV2 1170 aaKnown RBP18.68■□□□□ 0.58
MARK3-221ENST00000560603 ROBO1Q9Y6N7 1651 aa18.68■□□□□ 0.58
MARK3-221ENST00000560603 NWD1Q149M9 1564 aa18.68■□□□□ 0.58
MARK3-221ENST00000560603 ANKRD50Q9ULJ7 1429 aa18.67■□□□□ 0.58
MARK3-221ENST00000560603 PLEKHG1Q9ULL1 1385 aa18.67■□□□□ 0.58
MARK3-221ENST00000560603 SLAIN2Q9P270 581 aa18.66■□□□□ 0.58
MARK3-221ENST00000560603 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.65■□□□□ 0.58
MARK3-221ENST00000560603 RIMS2Q9UQ26 1411 aa18.64■□□□□ 0.57
MARK3-221ENST00000560603 POTEAQ6S8J7 498 aa18.63■□□□□ 0.57
MARK3-221ENST00000560603 ZFYVE9O95405 1425 aa18.63■□□□□ 0.57
MARK3-221ENST00000560603 TBX22Q9Y458 520 aa18.62■□□□□ 0.57
MARK3-221ENST00000560603 JCADQ9P266 1359 aa18.62■□□□□ 0.57
MARK3-221ENST00000560603 NCOA3Q9Y6Q9 1424 aa18.61■□□□□ 0.57
MARK3-221ENST00000560603 CHGAP10645 457 aaKnown RBP18.61■□□□□ 0.57
MARK3-221ENST00000560603 C14orf37Q86TY3 774 aa18.61■□□□□ 0.57
MARK3-221ENST00000560603 CHD2O14647 1828 aaKnown RBP18.59■□□□□ 0.57
MARK3-221ENST00000560603 PHLPP1O60346 1717 aa18.59■□□□□ 0.57
MARK3-221ENST00000560603 GCC2Q8IWJ2 1684 aa18.58■□□□□ 0.57
MARK3-221ENST00000560603 TMEM131LA2VDJ0 1609 aa18.58■□□□□ 0.56
MARK3-221ENST00000560603 CADPS2Q86UW7 1296 aa18.57■□□□□ 0.56
MARK3-221ENST00000560603 MYO5BQ9ULV0 1848 aa18.57■□□□□ 0.56
MARK3-221ENST00000560603 PIK3R4Q99570 1358 aa18.56■□□□□ 0.56
MARK3-221ENST00000560603 ATF3P18847 181 aa18.55■□□□□ 0.56
MARK3-221ENST00000560603 C19orf44Q9H6X5 657 aa18.54■□□□□ 0.56
MARK3-221ENST00000560603 UNC13BO14795 1591 aa18.54■□□□□ 0.56
MARK3-221ENST00000560603 DIP2AQ14689 1571 aa18.54■□□□□ 0.56
MARK3-221ENST00000560603 SPATA31A6Q5VVP1 1343 aa18.53■□□□□ 0.56
MARK3-221ENST00000560603 MEX3CQ5U5Q3 659 aaKnown RBP18.52■□□□□ 0.56
MARK3-221ENST00000560603 ROCK1Q13464 1354 aa18.52■□□□□ 0.55
MARK3-221ENST00000560603 ADAMTS13Q76LX8 1427 aa18.51■□□□□ 0.55
MARK3-221ENST00000560603 NUTM2DQ5VT03 806 aaPredicted RBP18.51■□□□□ 0.55
MARK3-221ENST00000560603 COL16A1Q07092 1604 aaPredicted RBP18.5■□□□□ 0.55
MARK3-221ENST00000560603 ZNF772Q68DY9 489 aaPredicted RBP18.5■□□□□ 0.55
MARK3-221ENST00000560603 E9PCH4 1651 aa18.49■□□□□ 0.55
MARK3-221ENST00000560603 NUP155O75694 1391 aa18.48■□□□□ 0.55
MARK3-221ENST00000560603 AMOTL2Q9Y2J4 779 aa18.48■□□□□ 0.55
MARK3-221ENST00000560603 IQGAP3Q86VI3 1631 aa18.48■□□□□ 0.55
MARK3-221ENST00000560603 TRPM2O94759 1503 aa18.48■□□□□ 0.55
MARK3-221ENST00000560603 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.47■□□□□ 0.55
MARK3-221ENST00000560603 AHDC1Q5TGY3 1603 aaPredicted RBP18.47■□□□□ 0.55
MARK3-221ENST00000560603 DCCP43146 1447 aa18.44■□□□□ 0.54
MARK3-221ENST00000560603 BRINP3Q76B58 766 aa18.43■□□□□ 0.54
MARK3-221ENST00000560603 LRP6O75581 1613 aa18.42■□□□□ 0.54
MARK3-221ENST00000560603 SHPRHQ149N8 1683 aa18.42■□□□□ 0.54
MARK3-221ENST00000560603 SETD1AO15047 1707 aaKnown RBP18.42■□□□□ 0.54
MARK3-221ENST00000560603 ITGAEP38570 1179 aa18.41■□□□□ 0.54
MARK3-221ENST00000560603 ZNF326Q5BKZ1 582 aaKnown RBP18.41■□□□□ 0.54
MARK3-221ENST00000560603 PTPRUQ92729 1446 aa18.4■□□□□ 0.54
MARK3-221ENST00000560603 RXRBP28702 533 aa18.4■□□□□ 0.54
MARK3-221ENST00000560603 NUTM2BA6NNL0 878 aaPredicted RBP18.39■□□□□ 0.53
MARK3-221ENST00000560603 NUTM2EB1AL46 878 aaPredicted RBP18.39■□□□□ 0.53
MARK3-221ENST00000560603 NUTM2AQ8IVF1 878 aaPredicted RBP18.39■□□□□ 0.53
MARK3-221ENST00000560603 TRIM52Q96A61 297 aa18.39■□□□□ 0.53
MARK3-221ENST00000560603 SETBP1Q9Y6X0 1596 aa18.38■□□□□ 0.53
MARK3-221ENST00000560603 LRRC59Q96AG4 307 aaKnown RBP18.37■□□□□ 0.53
MARK3-221ENST00000560603 ASXL1Q8IXJ9 1541 aa18.36■□□□□ 0.53
MARK3-221ENST00000560603 UPF1Q92900 1129 aaKnown RBP eCLIP18.36■□□□□ 0.53
MARK3-221ENST00000560603 XRN1Q8IZH2 1706 aaKnown RBP18.35■□□□□ 0.53
MARK3-221ENST00000560603 SETD5Q9C0A6 1442 aa18.35■□□□□ 0.53
MARK3-221ENST00000560603 SPHKAPQ2M3C7 1700 aa18.35■□□□□ 0.53
MARK3-221ENST00000560603 MST1RQ04912 1400 aa18.34■□□□□ 0.53
MARK3-221ENST00000560603 AFF2P51816 1311 aa18.33■□□□□ 0.53
MARK3-221ENST00000560603 NRXN3Q9Y4C0 1643 aa18.33■□□□□ 0.52
MARK3-221ENST00000560603 CDK12Q9NYV4 1490 aaPredicted RBP18.33■□□□□ 0.52
MARK3-221ENST00000560603 METP08581 1390 aa18.32■□□□□ 0.52
MARK3-221ENST00000560603 ADGRL3Q9HAR2 1447 aa18.32■□□□□ 0.52
MARK3-221ENST00000560603 NHSL1Q5SYE7 1610 aa18.3■□□□□ 0.52
MARK3-221ENST00000560603 C8orf37Q96NL8 207 aa18.28■□□□□ 0.52
MARK3-221ENST00000560603 VGFO15240 615 aaPredicted RBP18.27■□□□□ 0.52
MARK3-221ENST00000560603 PNPLA6Q8IY17 1366 aa18.27■□□□□ 0.51
MARK3-221ENST00000560603 RBM6P78332 1123 aaKnown RBP18.26■□□□□ 0.51
MARK3-221ENST00000560603 QTRT2Q9H974 415 aaKnown RBP18.26■□□□□ 0.51
MARK3-221ENST00000560603 NEXMIFQ5QGS0 1516 aa18.26■□□□□ 0.51
MARK3-221ENST00000560603 CLTCL1P53675 1640 aa18.24■□□□□ 0.51
MARK3-221ENST00000560603 KIF1BO60333 1816 aa18.24■□□□□ 0.51
MARK3-221ENST00000560603 PPARGC1BQ86YN6 1023 aaKnown RBP18.24■□□□□ 0.51
MARK3-221ENST00000560603 DDX17Q92841 729 aaKnown RBP18.24■□□□□ 0.51
MARK3-221ENST00000560603 NGLY1Q96IV0 654 aa18.24■□□□□ 0.51
MARK3-221ENST00000560603 C1orf167Q5SNV9 1468 aa18.23■□□□□ 0.51
MARK3-221ENST00000560603 NALCNQ8IZF0 1738 aa18.23■□□□□ 0.51
MARK3-221ENST00000560603 PTCH1Q13635 1447 aa18.23■□□□□ 0.51
MARK3-221ENST00000560603 ADAMTS2O95450 1211 aa18.21■□□□□ 0.51
MARK3-221ENST00000560603 RPGRIP1LQ68CZ1 1315 aa18.21■□□□□ 0.51
MARK3-221ENST00000560603 RGS12O14924 1447 aa18.19■□□□□ 0.5
MARK3-221ENST00000560603 SOS2Q07890 1332 aaPredicted RBP18.19■□□□□ 0.5
MARK3-221ENST00000560603 NAIPQ13075 1403 aa18.18■□□□□ 0.5
MARK3-221ENST00000560603 ORAI2Q96SN7 254 aa18.18■□□□□ 0.5
MARK3-221ENST00000560603 ROBO2Q9HCK4 1378 aa18.17■□□□□ 0.5
MARK3-221ENST00000560603 HFM1A2PYH4 1435 aa18.17■□□□□ 0.5
MARK3-221ENST00000560603 LAMC1P11047 1609 aa18.16■□□□□ 0.5
MARK3-221ENST00000560603 PRAG1Q86YV5 1406 aa18.16■□□□□ 0.5
MARK3-221ENST00000560603 USP21Q9UK80 565 aa18.16■□□□□ 0.5
MARK3-221ENST00000560603 TRPC5Q9UL62 973 aaPredicted RBP18.16■□□□□ 0.5
MARK3-221ENST00000560603 RRBP1Q9P2E9 1410 aaKnown RBP18.15■□□□□ 0.5
MARK3-221ENST00000560603 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
MARK3-221ENST00000560603 ATAD2Q6PL18 1390 aa18.15■□□□□ 0.5
MARK3-221ENST00000560603 FOXD1Q16676 465 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms