RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 PIK3C2BO00750 1634 aa14.92□□□□□ -0.02
CRTC3-209ENST00000560320 IFT172Q9UG01 1749 aa14.92□□□□□ -0.02
CRTC3-209ENST00000560320 SYNMO15061 1565 aa14.91□□□□□ -0.02
CRTC3-209ENST00000560320 ROCK2O75116 1388 aaKnown RBP14.91□□□□□ -0.02
CRTC3-209ENST00000560320 SLC52A1Q9NWF4 448 aa14.91□□□□□ -0.02
CRTC3-209ENST00000560320 POLR1AO95602 1720 aaPredicted RBP14.91□□□□□ -0.02
CRTC3-209ENST00000560320 ADGRB3O60242 1522 aa14.91□□□□□ -0.02
CRTC3-209ENST00000560320 PHF23Q9BUL5 403 aaPredicted RBP14.9□□□□□ -0.02
CRTC3-209ENST00000560320 CARD11Q9BXL7 1154 aa14.9□□□□□ -0.02
CRTC3-209ENST00000560320 LAMC1P11047 1609 aa14.9□□□□□ -0.02
CRTC3-209ENST00000560320 ERVK-7P63135 1459 aa14.89□□□□□ -0.03
CRTC3-209ENST00000560320 KIAA1210Q9ULL0 1709 aa14.89□□□□□ -0.03
CRTC3-209ENST00000560320 PPLO60437 1756 aa14.89□□□□□ -0.03
CRTC3-209ENST00000560320 HIRIP3Q9BW71 556 aaPredicted RBP14.89□□□□□ -0.03
CRTC3-209ENST00000560320 RPGRIP1LQ68CZ1 1315 aa14.89□□□□□ -0.03
CRTC3-209ENST00000560320 CEBPAP49715 358 aaPredicted RBP14.88□□□□□ -0.03
CRTC3-209ENST00000560320 MYOM2P54296 1465 aa14.88□□□□□ -0.03
CRTC3-209ENST00000560320 USP47Q96K76 1375 aa14.87□□□□□ -0.03
CRTC3-209ENST00000560320 HSPA1LP34931 641 aa14.87□□□□□ -0.03
CRTC3-209ENST00000560320 MYO5BQ9ULV0 1848 aa14.87□□□□□ -0.03
CRTC3-209ENST00000560320 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
CRTC3-209ENST00000560320 ZMYM3Q14202 1370 aa14.84□□□□□ -0.03
CRTC3-209ENST00000560320 IDI1Q13907 227 aa14.83□□□□□ -0.04
CRTC3-209ENST00000560320 GPRASP1Q5JY77 1395 aa14.83□□□□□ -0.04
CRTC3-209ENST00000560320 TMEM131LA2VDJ0 1609 aa14.82□□□□□ -0.04
CRTC3-209ENST00000560320 FBXO31Q5XUX0 539 aaPredicted RBP14.82□□□□□ -0.04
CRTC3-209ENST00000560320 VGFO15240 615 aaPredicted RBP14.81□□□□□ -0.04
CRTC3-209ENST00000560320 DDX10Q13206 875 aaKnown RBP14.81□□□□□ -0.04
CRTC3-209ENST00000560320 ZNF335Q9H4Z2 1342 aaPredicted RBP14.81□□□□□ -0.04
CRTC3-209ENST00000560320 C3P01024 1663 aa14.79□□□□□ -0.04
CRTC3-209ENST00000560320 IQGAP1P46940 1657 aa14.79□□□□□ -0.04
CRTC3-209ENST00000560320 NBPF1Q3BBV0 1214 aa14.79□□□□□ -0.04
CRTC3-209ENST00000560320 NEXMIFQ5QGS0 1516 aa14.79□□□□□ -0.04
CRTC3-209ENST00000560320 NRXN1Q9ULB1 1477 aa14.78□□□□□ -0.04
CRTC3-209ENST00000560320 TNRQ92752 1358 aa14.78□□□□□ -0.04
CRTC3-209ENST00000560320 KDM5AP29375 1690 aaKnown RBP14.77□□□□□ -0.04
CRTC3-209ENST00000560320 EIF3AQ14152 1382 aaKnown RBP14.77□□□□□ -0.04
CRTC3-209ENST00000560320 CCDC7Q96M83 1385 aa14.77□□□□□ -0.04
CRTC3-209ENST00000560320 ADGRF5Q8IZF2 1346 aa14.77□□□□□ -0.04
CRTC3-209ENST00000560320 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
CRTC3-209ENST00000560320 SETBP1Q9Y6X0 1596 aa14.76□□□□□ -0.05
CRTC3-209ENST00000560320 SCAF11Q99590 1463 aaKnown RBP14.76□□□□□ -0.05
CRTC3-209ENST00000560320 ZFYVE9O95405 1425 aa14.75□□□□□ -0.05
CRTC3-209ENST00000560320 SRCAPQ6ZRS2 3230 aa14.75□□□□□ -0.05
CRTC3-209ENST00000560320 ST20-MTHFSA0A0A6YYL1 179 aa14.75□□□□□ -0.05
CRTC3-209ENST00000560320 HDGFP51858 240 aaKnown RBP14.75□□□□□ -0.05
CRTC3-209ENST00000560320 WASHC2AQ641Q2 1341 aa14.74□□□□□ -0.05
CRTC3-209ENST00000560320 PIP4K2BP78356 416 aa14.74□□□□□ -0.05
CRTC3-209ENST00000560320 PIK3C2GO75747 1445 aa14.74□□□□□ -0.05
CRTC3-209ENST00000560320 SLC24A1O60721 1099 aa14.73□□□□□ -0.05
CRTC3-209ENST00000560320 CFAP70Q5T0N1 1121 aa14.73□□□□□ -0.05
CRTC3-209ENST00000560320 MIER1Q8N108 512 aa14.73□□□□□ -0.05
CRTC3-209ENST00000560320 NLRP1Q9C000 1473 aa14.73□□□□□ -0.05
CRTC3-209ENST00000560320 A2ML1A8K2U0 1454 aa14.72□□□□□ -0.05
CRTC3-209ENST00000560320 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.72□□□□□ -0.05
CRTC3-209ENST00000560320 POLR3GLQ9BT43 218 aa14.72□□□□□ -0.05
CRTC3-209ENST00000560320 KIF7Q2M1P5 1343 aa14.71□□□□□ -0.05
CRTC3-209ENST00000560320 ANP32CO43423 234 aa14.71□□□□□ -0.05
CRTC3-209ENST00000560320 C14orf93Q9H972 538 aaKnown RBP14.71□□□□□ -0.05
CRTC3-209ENST00000560320 RGS17Q9UGC6 210 aaPredicted RBP14.71□□□□□ -0.05
CRTC3-209ENST00000560320 UBR1Q8IWV7 1749 aa14.71□□□□□ -0.05
CRTC3-209ENST00000560320 RIMS2Q9UQ26 1411 aa14.7□□□□□ -0.06
CRTC3-209ENST00000560320 TMF1P82094 1093 aa14.7□□□□□ -0.06
CRTC3-209ENST00000560320 CDCA8Q53HL2 280 aa14.69□□□□□ -0.06
CRTC3-209ENST00000560320 NUTM2DQ5VT03 806 aaPredicted RBP14.69□□□□□ -0.06
CRTC3-209ENST00000560320 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
CRTC3-209ENST00000560320 TOM1O60784 492 aa14.68□□□□□ -0.06
CRTC3-209ENST00000560320 MYO3AQ8NEV4 1616 aa14.67□□□□□ -0.06
CRTC3-209ENST00000560320 NCKAP5LQ9HCH0 1330 aa14.66□□□□□ -0.06
CRTC3-209ENST00000560320 QRICH2Q9H0J4 1663 aa14.65□□□□□ -0.06
CRTC3-209ENST00000560320 ADGRB1O14514 1584 aa14.64□□□□□ -0.07
CRTC3-209ENST00000560320 SETD1AO15047 1707 aaKnown RBP14.64□□□□□ -0.07
CRTC3-209ENST00000560320 ALKQ9UM73 1620 aa14.64□□□□□ -0.07
CRTC3-209ENST00000560320 ARHGEF28Q8N1W1 1705 aaKnown RBP14.63□□□□□ -0.07
CRTC3-209ENST00000560320 TESK2Q96S53 571 aa14.63□□□□□ -0.07
CRTC3-209ENST00000560320 CENPJQ9HC77 1338 aaPredicted RBP14.63□□□□□ -0.07
CRTC3-209ENST00000560320 TMEM2Q9UHN6 1383 aa14.62□□□□□ -0.07
CRTC3-209ENST00000560320 BCANQ96GW7 911 aa14.62□□□□□ -0.07
CRTC3-209ENST00000560320 TRAK1Q9UPV9 953 aa14.62□□□□□ -0.07
CRTC3-209ENST00000560320 EID1Q9Y6B2 187 aa14.62□□□□□ -0.07
CRTC3-209ENST00000560320 TMEM132EQ6IEE7 984 aa14.61□□□□□ -0.07
CRTC3-209ENST00000560320 THEMISQ8N1K5 641 aaPredicted RBP14.61□□□□□ -0.07
CRTC3-209ENST00000560320 CPS1P31327 1500 aa14.61□□□□□ -0.07
CRTC3-209ENST00000560320 SBNO2Q9Y2G9 1366 aa14.6□□□□□ -0.07
CRTC3-209ENST00000560320 ZNF142P52746 1687 aaPredicted RBP14.6□□□□□ -0.07
CRTC3-209ENST00000560320 CEP170BQ9Y4F5 1589 aaPredicted RBP14.59□□□□□ -0.07
CRTC3-209ENST00000560320 CCER2I3L3R5 266 aa14.58□□□□□ -0.08
CRTC3-209ENST00000560320 YTHDC2Q9H6S0 1430 aaKnown RBP14.58□□□□□ -0.08
CRTC3-209ENST00000560320 SLIT1O75093 1534 aa14.57□□□□□ -0.08
CRTC3-209ENST00000560320 POTEAQ6S8J7 498 aa14.57□□□□□ -0.08
CRTC3-209ENST00000560320 SENP3Q9H4L4 574 aaPredicted RBP14.57□□□□□ -0.08
CRTC3-209ENST00000560320 ASXL1Q8IXJ9 1541 aa14.56□□□□□ -0.08
CRTC3-209ENST00000560320 NRXN3Q9Y4C0 1643 aa14.56□□□□□ -0.08
CRTC3-209ENST00000560320 TXNDC2Q86VQ3 553 aa14.56□□□□□ -0.08
CRTC3-209ENST00000560320 STK26Q9P289 416 aa14.56□□□□□ -0.08
CRTC3-209ENST00000560320 PLEKHG1Q9ULL1 1385 aa14.56□□□□□ -0.08
CRTC3-209ENST00000560320 POGKQ9P215 609 aa14.55□□□□□ -0.08
CRTC3-209ENST00000560320 ARHGAP23Q9P227 1491 aa14.55□□□□□ -0.08
CRTC3-209ENST00000560320 KNDC1Q76NI1 1749 aa14.55□□□□□ -0.08
CRTC3-209ENST00000560320 EVC2Q86UK5 1308 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms