RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 MYO5BQ9ULV0 1848 aa17.31■□□□□ 0.36
LINC02253-202ENST00000560314 FAM50AQ14320 339 aaKnown RBP17.3■□□□□ 0.36
LINC02253-202ENST00000560314 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
LINC02253-202ENST00000560314 ROBO1Q9Y6N7 1651 aa17.29■□□□□ 0.36
LINC02253-202ENST00000560314 TMEM131LA2VDJ0 1609 aa17.29■□□□□ 0.36
LINC02253-202ENST00000560314 CHD2O14647 1828 aaKnown RBP17.28■□□□□ 0.36
LINC02253-202ENST00000560314 PLEKHG1Q9ULL1 1385 aa17.28■□□□□ 0.36
LINC02253-202ENST00000560314 SLC26A8Q96RN1 970 aa17.26■□□□□ 0.35
LINC02253-202ENST00000560314 MSH6P52701 1360 aa17.26■□□□□ 0.35
LINC02253-202ENST00000560314 ROCK1Q13464 1354 aa17.26■□□□□ 0.35
LINC02253-202ENST00000560314 IQGAP3Q86VI3 1631 aa17.25■□□□□ 0.35
LINC02253-202ENST00000560314 DIP2AQ14689 1571 aa17.25■□□□□ 0.35
LINC02253-202ENST00000560314 RIMS2Q9UQ26 1411 aa17.25■□□□□ 0.35
LINC02253-202ENST00000560314 HDGFP51858 240 aaKnown RBP17.25■□□□□ 0.35
LINC02253-202ENST00000560314 PROSER2Q86WR7 435 aaPredicted RBP17.25■□□□□ 0.35
LINC02253-202ENST00000560314 E9PCH4 1651 aa17.25■□□□□ 0.35
LINC02253-202ENST00000560314 NCOA3Q9Y6Q9 1424 aa17.22■□□□□ 0.35
LINC02253-202ENST00000560314 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
LINC02253-202ENST00000560314 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
LINC02253-202ENST00000560314 BCANQ96GW7 911 aa17.21■□□□□ 0.35
LINC02253-202ENST00000560314 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.2■□□□□ 0.34
LINC02253-202ENST00000560314 PHLPP1O60346 1717 aa17.2■□□□□ 0.34
LINC02253-202ENST00000560314 PIK3R4Q99570 1358 aa17.19■□□□□ 0.34
LINC02253-202ENST00000560314 TBX22Q9Y458 520 aa17.18■□□□□ 0.34
LINC02253-202ENST00000560314 ADAMTS13Q76LX8 1427 aa17.17■□□□□ 0.34
LINC02253-202ENST00000560314 RGS17Q9UGC6 210 aaPredicted RBP17.17■□□□□ 0.34
LINC02253-202ENST00000560314 TRPM2O94759 1503 aa17.16■□□□□ 0.34
LINC02253-202ENST00000560314 RBM33Q96EV2 1170 aaKnown RBP17.15■□□□□ 0.34
LINC02253-202ENST00000560314 SLAIN2Q9P270 581 aa17.15■□□□□ 0.34
LINC02253-202ENST00000560314 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
LINC02253-202ENST00000560314 SPHKAPQ2M3C7 1700 aa17.14■□□□□ 0.33
LINC02253-202ENST00000560314 JCADQ9P266 1359 aa17.14■□□□□ 0.33
LINC02253-202ENST00000560314 NUP155O75694 1391 aa17.13■□□□□ 0.33
LINC02253-202ENST00000560314 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.13■□□□□ 0.33
LINC02253-202ENST00000560314 AHDC1Q5TGY3 1603 aaPredicted RBP17.12■□□□□ 0.33
LINC02253-202ENST00000560314 CHGAP10645 457 aaKnown RBP17.12■□□□□ 0.33
LINC02253-202ENST00000560314 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
LINC02253-202ENST00000560314 CADPS2Q86UW7 1296 aa17.1■□□□□ 0.33
LINC02253-202ENST00000560314 DCCP43146 1447 aa17.1■□□□□ 0.33
LINC02253-202ENST00000560314 XRN1Q8IZH2 1706 aaKnown RBP17.1■□□□□ 0.33
LINC02253-202ENST00000560314 SHPRHQ149N8 1683 aa17.09■□□□□ 0.33
LINC02253-202ENST00000560314 NRXN3Q9Y4C0 1643 aa17.08■□□□□ 0.32
LINC02253-202ENST00000560314 C14orf37Q86TY3 774 aa17.08■□□□□ 0.32
LINC02253-202ENST00000560314 C19orf44Q9H6X5 657 aa17.08■□□□□ 0.32
LINC02253-202ENST00000560314 SPATA31A6Q5VVP1 1343 aa17.07■□□□□ 0.32
LINC02253-202ENST00000560314 ATF3P18847 181 aa17.06■□□□□ 0.32
LINC02253-202ENST00000560314 POTEAQ6S8J7 498 aa17.06■□□□□ 0.32
LINC02253-202ENST00000560314 NUTM2DQ5VT03 806 aaPredicted RBP17.05■□□□□ 0.32
LINC02253-202ENST00000560314 PTPRUQ92729 1446 aa17.04■□□□□ 0.32
LINC02253-202ENST00000560314 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
LINC02253-202ENST00000560314 LRP6O75581 1613 aa17.03■□□□□ 0.32
LINC02253-202ENST00000560314 KIF1BO60333 1816 aa17.02■□□□□ 0.31
LINC02253-202ENST00000560314 CLTCL1P53675 1640 aa17.01■□□□□ 0.31
LINC02253-202ENST00000560314 ITGAEP38570 1179 aa17.01■□□□□ 0.31
LINC02253-202ENST00000560314 SETD1AO15047 1707 aaKnown RBP17.01■□□□□ 0.31
LINC02253-202ENST00000560314 NEXMIFQ5QGS0 1516 aa17.01■□□□□ 0.31
LINC02253-202ENST00000560314 NHSL1Q5SYE7 1610 aa17■□□□□ 0.31
LINC02253-202ENST00000560314 ASXL1Q8IXJ9 1541 aa17■□□□□ 0.31
LINC02253-202ENST00000560314 RRBP1Q9P2E9 1410 aaKnown RBP16.99■□□□□ 0.31
LINC02253-202ENST00000560314 MST1RQ04912 1400 aa16.97■□□□□ 0.31
LINC02253-202ENST00000560314 ADGRL3Q9HAR2 1447 aa16.97■□□□□ 0.31
LINC02253-202ENST00000560314 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
LINC02253-202ENST00000560314 ZNF772Q68DY9 489 aaPredicted RBP16.97■□□□□ 0.31
LINC02253-202ENST00000560314 BRINP3Q76B58 766 aa16.97■□□□□ 0.31
LINC02253-202ENST00000560314 SETD5Q9C0A6 1442 aa16.96■□□□□ 0.31
LINC02253-202ENST00000560314 NALCNQ8IZF0 1738 aa16.96■□□□□ 0.31
LINC02253-202ENST00000560314 MEX3CQ5U5Q3 659 aaKnown RBP16.96■□□□□ 0.31
LINC02253-202ENST00000560314 METP08581 1390 aa16.96■□□□□ 0.31
LINC02253-202ENST00000560314 NAIPQ13075 1403 aa16.95■□□□□ 0.3
LINC02253-202ENST00000560314 PTCH1Q13635 1447 aa16.94■□□□□ 0.3
LINC02253-202ENST00000560314 PRAG1Q86YV5 1406 aa16.93■□□□□ 0.3
LINC02253-202ENST00000560314 CDK12Q9NYV4 1490 aaPredicted RBP16.92■□□□□ 0.3
LINC02253-202ENST00000560314 LAMC1P11047 1609 aa16.92■□□□□ 0.3
LINC02253-202ENST00000560314 HFM1A2PYH4 1435 aa16.91■□□□□ 0.3
LINC02253-202ENST00000560314 PPLO60437 1756 aa16.89■□□□□ 0.29
LINC02253-202ENST00000560314 VGFO15240 615 aaPredicted RBP16.88■□□□□ 0.29
LINC02253-202ENST00000560314 PPARGC1BQ86YN6 1023 aaKnown RBP16.88■□□□□ 0.29
LINC02253-202ENST00000560314 LRRC59Q96AG4 307 aaKnown RBP16.88■□□□□ 0.29
LINC02253-202ENST00000560314 RPGRIP1LQ68CZ1 1315 aa16.87■□□□□ 0.29
LINC02253-202ENST00000560314 C1orf167Q5SNV9 1468 aa16.86■□□□□ 0.29
LINC02253-202ENST00000560314 PNPLA6Q8IY17 1366 aa16.86■□□□□ 0.29
LINC02253-202ENST00000560314 RXRBP28702 533 aa16.85■□□□□ 0.29
LINC02253-202ENST00000560314 NUTM2BA6NNL0 878 aaPredicted RBP16.84■□□□□ 0.29
LINC02253-202ENST00000560314 NUTM2EB1AL46 878 aaPredicted RBP16.84■□□□□ 0.29
LINC02253-202ENST00000560314 NUTM2AQ8IVF1 878 aaPredicted RBP16.84■□□□□ 0.29
LINC02253-202ENST00000560314 AFF2P51816 1311 aa16.84■□□□□ 0.29
LINC02253-202ENST00000560314 TRIM52Q96A61 297 aa16.83■□□□□ 0.28
LINC02253-202ENST00000560314 ROBO2Q9HCK4 1378 aa16.83■□□□□ 0.28
LINC02253-202ENST00000560314 CDC42BPGQ6DT37 1551 aa16.82■□□□□ 0.28
LINC02253-202ENST00000560314 UPF1Q92900 1129 aaKnown RBP eCLIP16.81■□□□□ 0.28
LINC02253-202ENST00000560314 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
LINC02253-202ENST00000560314 COL22A1Q8NFW1 1626 aaPredicted RBP16.8■□□□□ 0.28
LINC02253-202ENST00000560314 SOS2Q07890 1332 aaPredicted RBP16.79■□□□□ 0.28
LINC02253-202ENST00000560314 IFT172Q9UG01 1749 aa16.78■□□□□ 0.28
LINC02253-202ENST00000560314 KNDC1Q76NI1 1749 aa16.77■□□□□ 0.28
LINC02253-202ENST00000560314 DDX17Q92841 729 aaKnown RBP16.77■□□□□ 0.28
LINC02253-202ENST00000560314 C8orf37Q96NL8 207 aa16.77■□□□□ 0.28
LINC02253-202ENST00000560314 CCDC144AA2RUR9 1427 aa16.77■□□□□ 0.27
LINC02253-202ENST00000560314 RGS12O14924 1447 aa16.77■□□□□ 0.27
LINC02253-202ENST00000560314 RBM6P78332 1123 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms