RNA–Protein interactions for RNA: ENST00000560253.1

MEIS3-208, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,060 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-208ENST00000560253 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.33■■□□□ 1.17
MEIS3-208ENST00000560253 PPP1R15AO75807 674 aaPredicted RBP22.32■■□□□ 1.16
MEIS3-208ENST00000560253 ADGRB3O60242 1522 aa22.31■■□□□ 1.16
MEIS3-208ENST00000560253 CPS1P31327 1500 aa22.31■■□□□ 1.16
MEIS3-208ENST00000560253 E9PCH4 1651 aa22.31■■□□□ 1.16
MEIS3-208ENST00000560253 TOM1O60784 492 aa22.3■■□□□ 1.16
MEIS3-208ENST00000560253 SLC4A1APQ9BWU0 796 aaKnown RBP22.29■■□□□ 1.16
MEIS3-208ENST00000560253 ALKQ9UM73 1620 aa22.27■■□□□ 1.16
MEIS3-208ENST00000560253 RGS17Q9UGC6 210 aaPredicted RBP22.24■■□□□ 1.15
MEIS3-208ENST00000560253 RIMS2Q9UQ26 1411 aa22.23■■□□□ 1.15
MEIS3-208ENST00000560253 ZNF326Q5BKZ1 582 aaKnown RBP22.22■■□□□ 1.15
MEIS3-208ENST00000560253 SLC26A8Q96RN1 970 aa22.22■■□□□ 1.15
MEIS3-208ENST00000560253 TMEM131LA2VDJ0 1609 aa22.2■■□□□ 1.15
MEIS3-208ENST00000560253 PLEKHG1Q9ULL1 1385 aa22.19■■□□□ 1.14
MEIS3-208ENST00000560253 KCNA6P17658 529 aa22.18■■□□□ 1.14
MEIS3-208ENST00000560253 SPHKAPQ2M3C7 1700 aa22.17■■□□□ 1.14
MEIS3-208ENST00000560253 ZFYVE9O95405 1425 aa22.17■■□□□ 1.14
MEIS3-208ENST00000560253 SETD5Q9C0A6 1442 aa22.15■■□□□ 1.14
MEIS3-208ENST00000560253 TBX22Q9Y458 520 aa22.15■■□□□ 1.14
MEIS3-208ENST00000560253 NUTM2DQ5VT03 806 aaPredicted RBP22.14■■□□□ 1.13
MEIS3-208ENST00000560253 PROSER2Q86WR7 435 aaPredicted RBP22.14■■□□□ 1.13
MEIS3-208ENST00000560253 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
MEIS3-208ENST00000560253 MYO5BQ9ULV0 1848 aa22.14■■□□□ 1.13
MEIS3-208ENST00000560253 MPHOSPH9Q99550 1183 aa22.13■■□□□ 1.13
MEIS3-208ENST00000560253 LRRC7Q96NW7 1537 aa22.12■■□□□ 1.13
MEIS3-208ENST00000560253 TRPM2O94759 1503 aa22.11■■□□□ 1.13
MEIS3-208ENST00000560253 VGFO15240 615 aaPredicted RBP22.08■■□□□ 1.13
MEIS3-208ENST00000560253 RPGRIP1LQ68CZ1 1315 aa22.06■■□□□ 1.12
MEIS3-208ENST00000560253 KIF1BO60333 1816 aa22.06■■□□□ 1.12
MEIS3-208ENST00000560253 PIK3R4Q99570 1358 aa22.06■■□□□ 1.12
MEIS3-208ENST00000560253 STRCP1A6NGW2 1772 aa22.06■■□□□ 1.12
MEIS3-208ENST00000560253 FOXD1Q16676 465 aa22.05■■□□□ 1.12
MEIS3-208ENST00000560253 CLTCL1P53675 1640 aa22.05■■□□□ 1.12
MEIS3-208ENST00000560253 CCDC144AA2RUR9 1427 aa22.04■■□□□ 1.12
MEIS3-208ENST00000560253 DIP2AQ14689 1571 aa22.04■■□□□ 1.12
MEIS3-208ENST00000560253 NKTRP30414 1462 aaKnown RBP22.03■■□□□ 1.12
MEIS3-208ENST00000560253 TMEM94Q12767 1356 aa22.03■■□□□ 1.12
MEIS3-208ENST00000560253 RAB3GAP2Q9H2M9 1393 aa22.03■■□□□ 1.12
MEIS3-208ENST00000560253 POTEAQ6S8J7 498 aa22.03■■□□□ 1.12
MEIS3-208ENST00000560253 HRCP23327 699 aa22.02■■□□□ 1.12
MEIS3-208ENST00000560253 C14orf37Q86TY3 774 aa22.01■■□□□ 1.11
MEIS3-208ENST00000560253 ADAMTS13Q76LX8 1427 aa22■■□□□ 1.11
MEIS3-208ENST00000560253 MSH6P52701 1360 aa21.99■■□□□ 1.11
MEIS3-208ENST00000560253 AMOTL2Q9Y2J4 779 aa21.99■■□□□ 1.11
MEIS3-208ENST00000560253 CHD2O14647 1828 aaKnown RBP21.97■■□□□ 1.11
MEIS3-208ENST00000560253 NWD1Q149M9 1564 aa21.97■■□□□ 1.11
MEIS3-208ENST00000560253 NCOA3Q9Y6Q9 1424 aa21.97■■□□□ 1.11
MEIS3-208ENST00000560253 RGL3Q3MIN7 710 aa21.96■■□□□ 1.11
MEIS3-208ENST00000560253 RBM33Q96EV2 1170 aaKnown RBP21.96■■□□□ 1.11
MEIS3-208ENST00000560253 NEXMIFQ5QGS0 1516 aa21.95■■□□□ 1.1
MEIS3-208ENST00000560253 SETBP1Q9Y6X0 1596 aa21.94■■□□□ 1.1
MEIS3-208ENST00000560253 SETD1AO15047 1707 aaKnown RBP21.94■■□□□ 1.1
MEIS3-208ENST00000560253 C19orf44Q9H6X5 657 aa21.91■■□□□ 1.1
MEIS3-208ENST00000560253 ANKRD30BQ9BXX2 1392 aa21.9■■□□□ 1.1
MEIS3-208ENST00000560253 ATF3P18847 181 aa21.9■■□□□ 1.1
MEIS3-208ENST00000560253 XIRP1Q702N8 1843 aaKnown RBP21.9■■□□□ 1.1
MEIS3-208ENST00000560253 CADPS2Q86UW7 1296 aa21.89■■□□□ 1.09
MEIS3-208ENST00000560253 SLAIN2Q9P270 581 aa21.88■■□□□ 1.09
MEIS3-208ENST00000560253 FAM135BQ49AJ0 1406 aa21.88■■□□□ 1.09
MEIS3-208ENST00000560253 METP08581 1390 aa21.87■■□□□ 1.09
MEIS3-208ENST00000560253 PTPRUQ92729 1446 aa21.86■■□□□ 1.09
MEIS3-208ENST00000560253 NRXN3Q9Y4C0 1643 aa21.84■■□□□ 1.09
MEIS3-208ENST00000560253 SPATA31E1Q6ZUB1 1445 aa21.84■■□□□ 1.09
MEIS3-208ENST00000560253 PPLO60437 1756 aa21.82■■□□□ 1.08
MEIS3-208ENST00000560253 ADGRF5Q8IZF2 1346 aa21.81■■□□□ 1.08
MEIS3-208ENST00000560253 STAC3Q96MF2 364 aa21.79■■□□□ 1.08
MEIS3-208ENST00000560253 UPF1Q92900 1129 aaKnown RBP eCLIP21.77■■□□□ 1.08
MEIS3-208ENST00000560253 DCCP43146 1447 aa21.77■■□□□ 1.08
MEIS3-208ENST00000560253 XRN1Q8IZH2 1706 aaKnown RBP21.77■■□□□ 1.08
MEIS3-208ENST00000560253 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.74■■□□□ 1.07
MEIS3-208ENST00000560253 PTCH1Q13635 1447 aa21.73■■□□□ 1.07
MEIS3-208ENST00000560253 ROBO1Q9Y6N7 1651 aa21.73■■□□□ 1.07
MEIS3-208ENST00000560253 STK26Q9P289 416 aa21.73■■□□□ 1.07
MEIS3-208ENST00000560253 ADGRL3Q9HAR2 1447 aa21.72■■□□□ 1.07
MEIS3-208ENST00000560253 DCAF11Q8TEB1 546 aa21.71■■□□□ 1.07
MEIS3-208ENST00000560253 C14orf93Q9H972 538 aaKnown RBP21.71■■□□□ 1.07
MEIS3-208ENST00000560253 KDM2AQ9Y2K7 1162 aa21.71■■□□□ 1.07
MEIS3-208ENST00000560253 DHX57Q6P158 1386 aaKnown RBP21.7■■□□□ 1.06
MEIS3-208ENST00000560253 PIK3C2GO75747 1445 aa21.7■■□□□ 1.06
MEIS3-208ENST00000560253 IFT172Q9UG01 1749 aa21.69■■□□□ 1.06
MEIS3-208ENST00000560253 TMEM132EQ6IEE7 984 aa21.69■■□□□ 1.06
MEIS3-208ENST00000560253 ROBO2Q9HCK4 1378 aa21.69■■□□□ 1.06
MEIS3-208ENST00000560253 MYOM2P54296 1465 aa21.69■■□□□ 1.06
MEIS3-208ENST00000560253 LRPPRCP42704 1394 aaKnown RBP21.68■■□□□ 1.06
MEIS3-208ENST00000560253 ABCC11Q96J66 1382 aa21.68■■□□□ 1.06
MEIS3-208ENST00000560253 PRAG1Q86YV5 1406 aa21.68■■□□□ 1.06
MEIS3-208ENST00000560253 CFAP70Q5T0N1 1121 aa21.67■■□□□ 1.06
MEIS3-208ENST00000560253 BRINP3Q76B58 766 aa21.66■■□□□ 1.06
MEIS3-208ENST00000560253 SIRT1Q96EB6 747 aa21.65■■□□□ 1.06
MEIS3-208ENST00000560253 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.05
MEIS3-208ENST00000560253 YTHDC2Q9H6S0 1430 aaKnown RBP21.63■■□□□ 1.05
MEIS3-208ENST00000560253 JCADQ9P266 1359 aa21.63■■□□□ 1.05
MEIS3-208ENST00000560253 NRXN1Q9ULB1 1477 aa21.63■■□□□ 1.05
MEIS3-208ENST00000560253 PHLPP1O60346 1717 aa21.63■■□□□ 1.05
MEIS3-208ENST00000560253 MST1RQ04912 1400 aa21.63■■□□□ 1.05
MEIS3-208ENST00000560253 WAPLQ7Z5K2 1190 aa21.62■■□□□ 1.05
MEIS3-208ENST00000560253 LAMC1P11047 1609 aa21.62■■□□□ 1.05
MEIS3-208ENST00000560253 TECPR2O15040 1411 aa21.61■■□□□ 1.05
MEIS3-208ENST00000560253 POGKQ9P215 609 aa21.6■■□□□ 1.05
MEIS3-208ENST00000560253 LRRC59Q96AG4 307 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms