RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 HDGFP51858 240 aaKnown RBP35.14■■■■□ 3.22
CRNDE-209ENST00000560208 BCANQ96GW7 911 aa35.14■■■■□ 3.22
CRNDE-209ENST00000560208 DISP3Q9P2K9 1392 aa35.13■■■■□ 3.21
CRNDE-209ENST00000560208 NAIPQ13075 1403 aa35.13■■■■□ 3.21
CRNDE-209ENST00000560208 XIRP1Q702N8 1843 aaKnown RBP35.11■■■■□ 3.21
CRNDE-209ENST00000560208 PPP1R15AO75807 674 aaPredicted RBP35.1■■■■□ 3.21
CRNDE-209ENST00000560208 KCNA6P17658 529 aa35.1■■■■□ 3.21
CRNDE-209ENST00000560208 SENP3Q9H4L4 574 aaPredicted RBP35.1■■■■□ 3.21
CRNDE-209ENST00000560208 HSPA1LP34931 641 aa35.09■■■■□ 3.21
CRNDE-209ENST00000560208 PLEKHG1Q9ULL1 1385 aa35.09■■■■□ 3.21
CRNDE-209ENST00000560208 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.07■■■■□ 3.2
CRNDE-209ENST00000560208 SPHKAPQ2M3C7 1700 aa35.06■■■■□ 3.2
CRNDE-209ENST00000560208 HFM1A2PYH4 1435 aa35.01■■■■□ 3.2
CRNDE-209ENST00000560208 NUTM2DQ5VT03 806 aaPredicted RBP35.01■■■■□ 3.2
CRNDE-209ENST00000560208 PROSER2Q86WR7 435 aaPredicted RBP35■■■■□ 3.19
CRNDE-209ENST00000560208 TMEM94Q12767 1356 aa35■■■■□ 3.19
CRNDE-209ENST00000560208 NWD1Q149M9 1564 aa34.99■■■■□ 3.19
CRNDE-209ENST00000560208 CHD2O14647 1828 aaKnown RBP34.97■■■■□ 3.19
CRNDE-209ENST00000560208 TBX22Q9Y458 520 aa34.96■■■■□ 3.19
CRNDE-209ENST00000560208 NKTRP30414 1462 aaKnown RBP34.96■■■■□ 3.19
CRNDE-209ENST00000560208 TRIM52Q96A61 297 aa34.95■■■■□ 3.19
CRNDE-209ENST00000560208 RBM33Q96EV2 1170 aaKnown RBP34.94■■■■□ 3.18
CRNDE-209ENST00000560208 ADAMTS13Q76LX8 1427 aa34.9■■■■□ 3.18
CRNDE-209ENST00000560208 CLTCL1P53675 1640 aa34.88■■■■□ 3.17
CRNDE-209ENST00000560208 TRPM2O94759 1503 aa34.88■■■■□ 3.17
CRNDE-209ENST00000560208 ILDR2Q71H61 639 aa34.88■■■■□ 3.17
CRNDE-209ENST00000560208 DIP2AQ14689 1571 aa34.87■■■■□ 3.17
CRNDE-209ENST00000560208 ZNF326Q5BKZ1 582 aaKnown RBP34.87■■■■□ 3.17
CRNDE-209ENST00000560208 SLC4A1APQ9BWU0 796 aaKnown RBP34.84■■■■□ 3.17
CRNDE-209ENST00000560208 KIF1BO60333 1816 aa34.83■■■■□ 3.17
CRNDE-209ENST00000560208 PIK3R4Q99570 1358 aa34.81■■■■□ 3.16
CRNDE-209ENST00000560208 MSH6P52701 1360 aa34.8■■■■□ 3.16
CRNDE-209ENST00000560208 FAM135BQ49AJ0 1406 aa34.8■■■■□ 3.16
CRNDE-209ENST00000560208 MED1Q15648 1581 aaPredicted RBP34.77■■■■□ 3.16
CRNDE-209ENST00000560208 NRXN3Q9Y4C0 1643 aa34.75■■■■□ 3.15
CRNDE-209ENST00000560208 SETBP1Q9Y6X0 1596 aa34.74■■■■□ 3.15
CRNDE-209ENST00000560208 NEXMIFQ5QGS0 1516 aa34.73■■■■□ 3.15
CRNDE-209ENST00000560208 NCOA3Q9Y6Q9 1424 aa34.72■■■■□ 3.15
CRNDE-209ENST00000560208 AMOTL2Q9Y2J4 779 aa34.72■■■■□ 3.15
CRNDE-209ENST00000560208 ROBO1Q9Y6N7 1651 aa34.72■■■■□ 3.15
CRNDE-209ENST00000560208 PTPRUQ92729 1446 aa34.72■■■■□ 3.15
CRNDE-209ENST00000560208 C14orf37Q86TY3 774 aa34.7■■■■□ 3.15
CRNDE-209ENST00000560208 SLAIN2Q9P270 581 aa34.69■■■■□ 3.14
CRNDE-209ENST00000560208 FOXD1Q16676 465 aa34.66■■■■□ 3.14
CRNDE-209ENST00000560208 C19orf44Q9H6X5 657 aa34.63■■■■□ 3.13
CRNDE-209ENST00000560208 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.63■■■■□ 3.13
CRNDE-209ENST00000560208 METP08581 1390 aa34.62■■■■□ 3.13
CRNDE-209ENST00000560208 XRN1Q8IZH2 1706 aaKnown RBP34.62■■■■□ 3.13
CRNDE-209ENST00000560208 VGFO15240 615 aaPredicted RBP34.61■■■■□ 3.13
CRNDE-209ENST00000560208 MPHOSPH9Q99550 1183 aa34.61■■■■□ 3.13
CRNDE-209ENST00000560208 RPGRIP1LQ68CZ1 1315 aa34.59■■■■□ 3.13
CRNDE-209ENST00000560208 SOCS7O14512 581 aa34.58■■■■□ 3.13
CRNDE-209ENST00000560208 ATF3P18847 181 aa34.57■■■■□ 3.12
CRNDE-209ENST00000560208 CADPS2Q86UW7 1296 aa34.57■■■■□ 3.12
CRNDE-209ENST00000560208 PHF23Q9BUL5 403 aaPredicted RBP34.56■■■■□ 3.12
CRNDE-209ENST00000560208 SETD5Q9C0A6 1442 aa34.55■■■■□ 3.12
CRNDE-209ENST00000560208 PPLO60437 1756 aa34.55■■■■□ 3.12
CRNDE-209ENST00000560208 ACIN1Q9UKV3 1341 aaKnown RBP34.54■■■■□ 3.12
CRNDE-209ENST00000560208 CCDC144AA2RUR9 1427 aa34.53■■■■□ 3.12
CRNDE-209ENST00000560208 PHLPP1O60346 1717 aa34.52■■■■□ 3.12
CRNDE-209ENST00000560208 SETD1AO15047 1707 aaKnown RBP34.48■■■■□ 3.11
CRNDE-209ENST00000560208 DCCP43146 1447 aa34.47■■■■□ 3.11
CRNDE-209ENST00000560208 RGL3Q3MIN7 710 aa34.45■■■■□ 3.11
CRNDE-209ENST00000560208 SPATA31E1Q6ZUB1 1445 aa34.43■■■■□ 3.1
CRNDE-209ENST00000560208 RAB3GAP2Q9H2M9 1393 aa34.42■■■■□ 3.1
CRNDE-209ENST00000560208 COL16A1Q07092 1604 aaPredicted RBP34.4■■■■□ 3.1
CRNDE-209ENST00000560208 ADGRL3Q9HAR2 1447 aa34.39■■■■□ 3.1
CRNDE-209ENST00000560208 JCADQ9P266 1359 aa34.38■■■■□ 3.09
CRNDE-209ENST00000560208 BRINP3Q76B58 766 aa34.38■■■■□ 3.09
CRNDE-209ENST00000560208 NALCNQ8IZF0 1738 aa34.38■■■■□ 3.09
CRNDE-209ENST00000560208 ADGRF5Q8IZF2 1346 aa34.37■■■■□ 3.09
CRNDE-209ENST00000560208 AHDC1Q5TGY3 1603 aaPredicted RBP34.37■■■■□ 3.09
CRNDE-209ENST00000560208 IFT172Q9UG01 1749 aa34.36■■■■□ 3.09
CRNDE-209ENST00000560208 PTCH1Q13635 1447 aa34.36■■■■□ 3.09
CRNDE-209ENST00000560208 MST1RQ04912 1400 aa34.35■■■■□ 3.09
CRNDE-209ENST00000560208 ANKRD30BQ9BXX2 1392 aa34.35■■■■□ 3.09
CRNDE-209ENST00000560208 ROBO2Q9HCK4 1378 aa34.35■■■■□ 3.09
CRNDE-209ENST00000560208 RGS17Q9UGC6 210 aaPredicted RBP34.33■■■■□ 3.09
CRNDE-209ENST00000560208 PRAG1Q86YV5 1406 aa34.31■■■■□ 3.08
CRNDE-209ENST00000560208 ASXL1Q8IXJ9 1541 aa34.29■■■■□ 3.08
CRNDE-209ENST00000560208 NHSL1Q5SYE7 1610 aa34.22■■■■□ 3.07
CRNDE-209ENST00000560208 SHPRHQ149N8 1683 aa34.22■■■■□ 3.07
CRNDE-209ENST00000560208 PIK3C2GO75747 1445 aa34.21■■■■□ 3.07
CRNDE-209ENST00000560208 SPATA31A6Q5VVP1 1343 aa34.21■■■■□ 3.07
CRNDE-209ENST00000560208 STK26Q9P289 416 aa34.2■■■■□ 3.07
CRNDE-209ENST00000560208 HRCP23327 699 aa34.19■■■■□ 3.06
CRNDE-209ENST00000560208 C1orf167Q5SNV9 1468 aa34.19■■■■□ 3.06
CRNDE-209ENST00000560208 LRPPRCP42704 1394 aaKnown RBP34.17■■■■□ 3.06
CRNDE-209ENST00000560208 TMEM132EQ6IEE7 984 aa34.17■■■■□ 3.06
CRNDE-209ENST00000560208 POTEAQ6S8J7 498 aa34.15■■■■□ 3.06
CRNDE-209ENST00000560208 DDX17Q92841 729 aaKnown RBP34.15■■■■□ 3.06
CRNDE-209ENST00000560208 TECPR2O15040 1411 aa34.14■■■■□ 3.06
CRNDE-209ENST00000560208 LRP6O75581 1613 aa34.14■■■■□ 3.06
CRNDE-209ENST00000560208 ABCC11Q96J66 1382 aa34.13■■■■□ 3.05
CRNDE-209ENST00000560208 LRRC59Q96AG4 307 aaKnown RBP34.12■■■■□ 3.05
CRNDE-209ENST00000560208 C14orf93Q9H972 538 aaKnown RBP34.12■■■■□ 3.05
CRNDE-209ENST00000560208 KNDC1Q76NI1 1749 aa34.12■■■■□ 3.05
CRNDE-209ENST00000560208 WAPLQ7Z5K2 1190 aa34.11■■■■□ 3.05
CRNDE-209ENST00000560208 ORAI2Q96SN7 254 aa34.11■■■■□ 3.05
CRNDE-209ENST00000560208 MYOM2P54296 1465 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms