RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 MSH6P52701 1360 aa31.08■■■□□ 2.57
RABGGTA-214ENST00000560163 ZFYVE9O95405 1425 aa31.06■■■□□ 2.56
RABGGTA-214ENST00000560163 PHLPP1O60346 1717 aa31.05■■■□□ 2.56
RABGGTA-214ENST00000560163 CHD2O14647 1828 aaKnown RBP31.05■■■□□ 2.56
RABGGTA-214ENST00000560163 JCADQ9P266 1359 aa31.04■■■□□ 2.56
RABGGTA-214ENST00000560163 PLEKHG1Q9ULL1 1385 aa31.02■■■□□ 2.56
RABGGTA-214ENST00000560163 RPRD2Q5VT52 1461 aaKnown RBP31.01■■■□□ 2.55
RABGGTA-214ENST00000560163 BCANQ96GW7 911 aa31■■■□□ 2.55
RABGGTA-214ENST00000560163 ADGRL2O95490 1459 aa31■■■□□ 2.55
RABGGTA-214ENST00000560163 SETD1AO15047 1707 aaKnown RBP30.98■■■□□ 2.55
RABGGTA-214ENST00000560163 MYO5BQ9ULV0 1848 aa30.98■■■□□ 2.55
RABGGTA-214ENST00000560163 COL16A1Q07092 1604 aaPredicted RBP30.98■■■□□ 2.55
RABGGTA-214ENST00000560163 NCOA3Q9Y6Q9 1424 aa30.96■■■□□ 2.55
RABGGTA-214ENST00000560163 TBX22Q9Y458 520 aa30.95■■■□□ 2.55
RABGGTA-214ENST00000560163 RIMS2Q9UQ26 1411 aa30.95■■■□□ 2.54
RABGGTA-214ENST00000560163 TMEM131LA2VDJ0 1609 aa30.95■■■□□ 2.54
RABGGTA-214ENST00000560163 APLP2Q06481 763 aa30.94■■■□□ 2.54
RABGGTA-214ENST00000560163 HDGFP51858 240 aaKnown RBP30.92■■■□□ 2.54
RABGGTA-214ENST00000560163 GCC2Q8IWJ2 1684 aa30.92■■■□□ 2.54
RABGGTA-214ENST00000560163 LRP6O75581 1613 aa30.91■■■□□ 2.54
RABGGTA-214ENST00000560163 ANKRD50Q9ULJ7 1429 aa30.9■■■□□ 2.54
RABGGTA-214ENST00000560163 SPATA31A6Q5VVP1 1343 aa30.89■■■□□ 2.54
RABGGTA-214ENST00000560163 PPP1R15AO75807 674 aaPredicted RBP30.88■■■□□ 2.53
RABGGTA-214ENST00000560163 ADAMTS13Q76LX8 1427 aa30.87■■■□□ 2.53
RABGGTA-214ENST00000560163 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.84■■■□□ 2.53
RABGGTA-214ENST00000560163 AHDC1Q5TGY3 1603 aaPredicted RBP30.84■■■□□ 2.53
RABGGTA-214ENST00000560163 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.84■■■□□ 2.53
RABGGTA-214ENST00000560163 C19orf44Q9H6X5 657 aa30.84■■■□□ 2.53
RABGGTA-214ENST00000560163 CADPS2Q86UW7 1296 aa30.82■■■□□ 2.52
RABGGTA-214ENST00000560163 UPF1Q92900 1129 aaKnown RBP eCLIP30.82■■■□□ 2.52
RABGGTA-214ENST00000560163 PIK3R4Q99570 1358 aa30.81■■■□□ 2.52
RABGGTA-214ENST00000560163 ZNF772Q68DY9 489 aaPredicted RBP30.81■■■□□ 2.52
RABGGTA-214ENST00000560163 SHPRHQ149N8 1683 aa30.81■■■□□ 2.52
RABGGTA-214ENST00000560163 DIP2AQ14689 1571 aa30.79■■■□□ 2.52
RABGGTA-214ENST00000560163 C14orf37Q86TY3 774 aa30.78■■■□□ 2.52
RABGGTA-214ENST00000560163 UNC13BO14795 1591 aa30.77■■■□□ 2.52
RABGGTA-214ENST00000560163 ATF3P18847 181 aa30.77■■■□□ 2.52
RABGGTA-214ENST00000560163 NUTM2DQ5VT03 806 aaPredicted RBP30.77■■■□□ 2.52
RABGGTA-214ENST00000560163 FAM50AQ14320 339 aaKnown RBP30.76■■■□□ 2.51
RABGGTA-214ENST00000560163 MEX3CQ5U5Q3 659 aaKnown RBP30.76■■■□□ 2.51
RABGGTA-214ENST00000560163 E9PCH4 1651 aa30.76■■■□□ 2.51
RABGGTA-214ENST00000560163 CHGAP10645 457 aaKnown RBP30.75■■■□□ 2.51
RABGGTA-214ENST00000560163 BRINP3Q76B58 766 aa30.73■■■□□ 2.51
RABGGTA-214ENST00000560163 TRIM52Q96A61 297 aa30.73■■■□□ 2.51
RABGGTA-214ENST00000560163 PTPRUQ92729 1446 aa30.73■■■□□ 2.51
RABGGTA-214ENST00000560163 AMOTL2Q9Y2J4 779 aa30.71■■■□□ 2.51
RABGGTA-214ENST00000560163 TRPM2O94759 1503 aa30.69■■■□□ 2.5
RABGGTA-214ENST00000560163 RXRBP28702 533 aa30.68■■■□□ 2.5
RABGGTA-214ENST00000560163 DCCP43146 1447 aa30.66■■■□□ 2.5
RABGGTA-214ENST00000560163 IQGAP3Q86VI3 1631 aa30.65■■■□□ 2.5
RABGGTA-214ENST00000560163 CDK12Q9NYV4 1490 aaPredicted RBP30.65■■■□□ 2.5
RABGGTA-214ENST00000560163 SETD5Q9C0A6 1442 aa30.63■■■□□ 2.49
RABGGTA-214ENST00000560163 NUTM2BA6NNL0 878 aaPredicted RBP30.61■■■□□ 2.49
RABGGTA-214ENST00000560163 NUTM2EB1AL46 878 aaPredicted RBP30.61■■■□□ 2.49
RABGGTA-214ENST00000560163 NUTM2AQ8IVF1 878 aaPredicted RBP30.61■■■□□ 2.49
RABGGTA-214ENST00000560163 ASXL1Q8IXJ9 1541 aa30.61■■■□□ 2.49
RABGGTA-214ENST00000560163 ROCK1Q13464 1354 aa30.6■■■□□ 2.49
RABGGTA-214ENST00000560163 XRN1Q8IZH2 1706 aaKnown RBP30.6■■■□□ 2.49
RABGGTA-214ENST00000560163 NRXN3Q9Y4C0 1643 aa30.6■■■□□ 2.49
RABGGTA-214ENST00000560163 MST1RQ04912 1400 aa30.59■■■□□ 2.49
RABGGTA-214ENST00000560163 AFF2P51816 1311 aa30.58■■■□□ 2.49
RABGGTA-214ENST00000560163 NHSL1Q5SYE7 1610 aa30.58■■■□□ 2.49
RABGGTA-214ENST00000560163 SETBP1Q9Y6X0 1596 aa30.57■■■□□ 2.48
RABGGTA-214ENST00000560163 NUP155O75694 1391 aa30.54■■■□□ 2.48
RABGGTA-214ENST00000560163 LRRC59Q96AG4 307 aaKnown RBP30.54■■■□□ 2.48
RABGGTA-214ENST00000560163 SRCAPQ6ZRS2 3230 aa30.53■■■□□ 2.48
RABGGTA-214ENST00000560163 METP08581 1390 aa30.52■■■□□ 2.48
RABGGTA-214ENST00000560163 PNPLA6Q8IY17 1366 aa30.47■■■□□ 2.47
RABGGTA-214ENST00000560163 DDX17Q92841 729 aaKnown RBP30.47■■■□□ 2.47
RABGGTA-214ENST00000560163 QTRT2Q9H974 415 aaKnown RBP30.47■■■□□ 2.47
RABGGTA-214ENST00000560163 RGS12O14924 1447 aa30.47■■■□□ 2.47
RABGGTA-214ENST00000560163 ADGRL3Q9HAR2 1447 aa30.46■■■□□ 2.47
RABGGTA-214ENST00000560163 RBM6P78332 1123 aaKnown RBP30.45■■■□□ 2.47
RABGGTA-214ENST00000560163 C8orf37Q96NL8 207 aa30.44■■■□□ 2.46
RABGGTA-214ENST00000560163 SPHKAPQ2M3C7 1700 aa30.43■■■□□ 2.46
RABGGTA-214ENST00000560163 NALCNQ8IZF0 1738 aa30.41■■■□□ 2.46
RABGGTA-214ENST00000560163 ZNF326Q5BKZ1 582 aaKnown RBP30.4■■■□□ 2.46
RABGGTA-214ENST00000560163 LAMC1P11047 1609 aa30.38■■■□□ 2.45
RABGGTA-214ENST00000560163 C1orf167Q5SNV9 1468 aa30.37■■■□□ 2.45
RABGGTA-214ENST00000560163 NEXMIFQ5QGS0 1516 aa30.37■■■□□ 2.45
RABGGTA-214ENST00000560163 NGLY1Q96IV0 654 aa30.33■■■□□ 2.45
RABGGTA-214ENST00000560163 SOS2Q07890 1332 aaPredicted RBP30.32■■■□□ 2.44
RABGGTA-214ENST00000560163 ADAMTS2O95450 1211 aa30.31■■■□□ 2.44
RABGGTA-214ENST00000560163 ITGAEP38570 1179 aa30.31■■■□□ 2.44
RABGGTA-214ENST00000560163 CLTCL1P53675 1640 aa30.31■■■□□ 2.44
RABGGTA-214ENST00000560163 ORAI2Q96SN7 254 aa30.28■■■□□ 2.44
RABGGTA-214ENST00000560163 PTCH1Q13635 1447 aa30.27■■■□□ 2.44
RABGGTA-214ENST00000560163 EP400Q96L91 3159 aa30.27■■■□□ 2.44
RABGGTA-214ENST00000560163 FNBP4Q8N3X1 1017 aaPredicted RBP30.26■■■□□ 2.43
RABGGTA-214ENST00000560163 ROBO2Q9HCK4 1378 aa30.26■■■□□ 2.43
RABGGTA-214ENST00000560163 USP21Q9UK80 565 aa30.24■■■□□ 2.43
RABGGTA-214ENST00000560163 ATAD2Q6PL18 1390 aa30.24■■■□□ 2.43
RABGGTA-214ENST00000560163 PRAG1Q86YV5 1406 aa30.23■■■□□ 2.43
RABGGTA-214ENST00000560163 TRPC5Q9UL62 973 aaPredicted RBP30.22■■■□□ 2.43
RABGGTA-214ENST00000560163 KIF1BO60333 1816 aa30.21■■■□□ 2.43
RABGGTA-214ENST00000560163 COL22A1Q8NFW1 1626 aaPredicted RBP30.2■■■□□ 2.43
RABGGTA-214ENST00000560163 ATRNO75882 1429 aa30.19■■■□□ 2.42
RABGGTA-214ENST00000560163 VGFO15240 615 aaPredicted RBP30.18■■■□□ 2.42
RABGGTA-214ENST00000560163 MYOM2P54296 1465 aa30.13■■■□□ 2.41
RABGGTA-214ENST00000560163 HFM1A2PYH4 1435 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms