RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 FAM161AQ3B820 660 aa6.7□□□□□ -1.34
LRRC49-221ENST00000560107 CHMP7Q8WUX9 453 aaPredicted RBP6.7□□□□□ -1.34
LRRC49-221ENST00000560107 PLEKHH1Q9ULM0 1364 aa6.7□□□□□ -1.34
LRRC49-221ENST00000560107 PRDM15P57071 1507 aaPredicted RBP6.7□□□□□ -1.34
LRRC49-221ENST00000560107 DUSP27Q5VZP5 1158 aa6.7□□□□□ -1.34
LRRC49-221ENST00000560107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.7□□□□□ -1.34
LRRC49-221ENST00000560107 ATP10BO94823 1461 aa6.7□□□□□ -1.34
LRRC49-221ENST00000560107 PLA2R1Q13018 1463 aa6.7□□□□□ -1.34
LRRC49-221ENST00000560107 TMF1P82094 1093 aa6.7□□□□□ -1.34
LRRC49-221ENST00000560107 JPH4Q96JJ6 628 aa6.7□□□□□ -1.34
LRRC49-221ENST00000560107 CARMIL2Q6F5E8 1435 aa6.69□□□□□ -1.34
LRRC49-221ENST00000560107 RGS3P49796 1198 aa6.69□□□□□ -1.34
LRRC49-221ENST00000560107 SAMD1Q6SPF0 538 aaPredicted RBP6.69□□□□□ -1.34
LRRC49-221ENST00000560107 ABCA8O94911 1581 aa6.69□□□□□ -1.34
LRRC49-221ENST00000560107 ARHGEF5Q12774 1597 aa6.69□□□□□ -1.34
LRRC49-221ENST00000560107 FRAT2O75474 233 aaPredicted RBP6.69□□□□□ -1.34
LRRC49-221ENST00000560107 PPP2R1AP30153 589 aa6.69□□□□□ -1.34
LRRC49-221ENST00000560107 WDR43Q15061 677 aaKnown RBP eCLIP6.69□□□□□ -1.34
LRRC49-221ENST00000560107 MYO5CQ9NQX4 1742 aa6.68□□□□□ -1.34
LRRC49-221ENST00000560107 A0A0U1RQG5 324 aaPredicted RBP6.68□□□□□ -1.34
LRRC49-221ENST00000560107 LAMC1P11047 1609 aa6.68□□□□□ -1.34
LRRC49-221ENST00000560107 GOLGA2Q08379 1002 aa6.68□□□□□ -1.34
LRRC49-221ENST00000560107 ZNF521Q96K83 1311 aa6.68□□□□□ -1.34
LRRC49-221ENST00000560107 SAMD9LQ8IVG5 1584 aa6.67□□□□□ -1.34
LRRC49-221ENST00000560107 CCDC141Q6ZP82 1450 aa6.67□□□□□ -1.34
LRRC49-221ENST00000560107 MAGI2Q86UL8 1455 aa6.67□□□□□ -1.34
LRRC49-221ENST00000560107 SLFN5Q08AF3 891 aa6.67□□□□□ -1.34
LRRC49-221ENST00000560107 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.67□□□□□ -1.34
LRRC49-221ENST00000560107 KNSTRNQ9Y448 316 aa6.67□□□□□ -1.34
LRRC49-221ENST00000560107 BRD2P25440 801 aaKnown RBP6.66□□□□□ -1.34
LRRC49-221ENST00000560107 CCDC146Q8IYE0 955 aa6.66□□□□□ -1.34
LRRC49-221ENST00000560107 SPINK5Q9NQ38 1064 aaPredicted RBP6.66□□□□□ -1.34
LRRC49-221ENST00000560107 SYNJ2O15056 1496 aa6.66□□□□□ -1.34
LRRC49-221ENST00000560107 WDR7Q9Y4E6 1490 aa6.66□□□□□ -1.34
LRRC49-221ENST00000560107 CDC42BPBQ9Y5S2 1711 aa6.66□□□□□ -1.34
LRRC49-221ENST00000560107 EIF2AK4Q9P2K8 1649 aaKnown RBP6.66□□□□□ -1.34
LRRC49-221ENST00000560107 UNC13BO14795 1591 aa6.65□□□□□ -1.34
LRRC49-221ENST00000560107 BCAR3O75815 825 aa6.65□□□□□ -1.34
LRRC49-221ENST00000560107 IGHDP01880 384 aa6.64□□□□□ -1.35
LRRC49-221ENST00000560107 TRMT2AQ8IZ69 625 aaKnown RBP6.64□□□□□ -1.35
LRRC49-221ENST00000560107 SYCP2Q9BX26 1530 aa6.64□□□□□ -1.35
LRRC49-221ENST00000560107 PREX2Q70Z35 1606 aa6.64□□□□□ -1.35
LRRC49-221ENST00000560107 NUP160Q12769 1436 aa6.64□□□□□ -1.35
LRRC49-221ENST00000560107 APAF1O14727 1248 aa6.64□□□□□ -1.35
LRRC49-221ENST00000560107 RSPH4AQ5TD94 716 aa6.64□□□□□ -1.35
LRRC49-221ENST00000560107 RNF39Q9H2S5 420 aa6.64□□□□□ -1.35
LRRC49-221ENST00000560107 RNF17Q9BXT8 1623 aaKnown RBP6.64□□□□□ -1.35
LRRC49-221ENST00000560107 USP19O94966 1318 aa6.64□□□□□ -1.35
LRRC49-221ENST00000560107 IQGAP3Q86VI3 1631 aa6.63□□□□□ -1.35
LRRC49-221ENST00000560107 CLASP1Q7Z460 1538 aa6.63□□□□□ -1.35
LRRC49-221ENST00000560107 SEC24BO95487 1268 aa6.63□□□□□ -1.35
LRRC49-221ENST00000560107 AAMPQ13685 434 aa6.63□□□□□ -1.35
LRRC49-221ENST00000560107 EIF3AQ14152 1382 aaKnown RBP6.63□□□□□ -1.35
LRRC49-221ENST00000560107 C1QBPQ07021 282 aaKnown RBP6.63□□□□□ -1.35
LRRC49-221ENST00000560107 NKTRP30414 1462 aaKnown RBP6.62□□□□□ -1.35
LRRC49-221ENST00000560107 ASXL1Q8IXJ9 1541 aa6.62□□□□□ -1.35
LRRC49-221ENST00000560107 VIRMAQ69YN4 1812 aaKnown RBP6.62□□□□□ -1.35
LRRC49-221ENST00000560107 PIK3C2GO75747 1445 aa6.62□□□□□ -1.35
LRRC49-221ENST00000560107 IQGAP1P46940 1657 aa6.62□□□□□ -1.35
LRRC49-221ENST00000560107 ATP10AO60312 1499 aa6.62□□□□□ -1.35
LRRC49-221ENST00000560107 POGKQ9P215 609 aa6.62□□□□□ -1.35
LRRC49-221ENST00000560107 ARHGAP5Q13017 1502 aa6.61□□□□□ -1.35
LRRC49-221ENST00000560107 SYNMO15061 1565 aa6.61□□□□□ -1.35
LRRC49-221ENST00000560107 MAST1Q9Y2H9 1570 aa6.61□□□□□ -1.35
LRRC49-221ENST00000560107 E9PSI1 815 aa6.61□□□□□ -1.35
LRRC49-221ENST00000560107 FBXO3Q9UK99 471 aa6.61□□□□□ -1.35
LRRC49-221ENST00000560107 MADDQ8WXG6 1647 aa6.61□□□□□ -1.35
LRRC49-221ENST00000560107 PANK1Q8TE04 598 aa6.61□□□□□ -1.35
LRRC49-221ENST00000560107 SLKQ9H2G2 1235 aaPredicted RBP6.61□□□□□ -1.35
LRRC49-221ENST00000560107 COG6Q9Y2V7 657 aa6.61□□□□□ -1.35
LRRC49-221ENST00000560107 TTC37Q6PGP7 1564 aa6.61□□□□□ -1.35
LRRC49-221ENST00000560107 MYOM1P52179 1685 aa6.6□□□□□ -1.35
LRRC49-221ENST00000560107 CDCA8Q53HL2 280 aa6.6□□□□□ -1.35
LRRC49-221ENST00000560107 FAM43AQ8N2R8 423 aa6.6□□□□□ -1.35
LRRC49-221ENST00000560107 ABCC2Q92887 1545 aa6.6□□□□□ -1.35
LRRC49-221ENST00000560107 CANXP27824 592 aaKnown RBP6.6□□□□□ -1.35
LRRC49-221ENST00000560107 CLUAP1Q96AJ1 413 aa6.6□□□□□ -1.35
LRRC49-221ENST00000560107 CGNL1Q0VF96 1302 aa6.6□□□□□ -1.35
LRRC49-221ENST00000560107 PLXNC1O60486 1568 aa6.59□□□□□ -1.35
LRRC49-221ENST00000560107 PAXIP1Q6ZW49 1069 aaPredicted RBP6.59□□□□□ -1.35
LRRC49-221ENST00000560107 SCAF11Q99590 1463 aaKnown RBP6.59□□□□□ -1.35
LRRC49-221ENST00000560107 DUOX2Q9NRD8 1548 aa6.59□□□□□ -1.35
LRRC49-221ENST00000560107 PDE3AQ14432 1141 aa6.59□□□□□ -1.35
LRRC49-221ENST00000560107 BECN1Q14457 450 aa6.59□□□□□ -1.35
LRRC49-221ENST00000560107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.59□□□□□ -1.35
LRRC49-221ENST00000560107 CENPJQ9HC77 1338 aaPredicted RBP6.59□□□□□ -1.35
LRRC49-221ENST00000560107 MAPK8IP3Q9UPT6 1336 aa6.59□□□□□ -1.35
LRRC49-221ENST00000560107 NPC1L1Q9UHC9 1359 aa6.59□□□□□ -1.36
LRRC49-221ENST00000560107 ERCC6Q03468 1493 aa6.58□□□□□ -1.36
LRRC49-221ENST00000560107 NLRP1Q9C000 1473 aa6.58□□□□□ -1.36
LRRC49-221ENST00000560107 RBM10P98175 930 aaKnown RBP6.58□□□□□ -1.36
LRRC49-221ENST00000560107 WWC1Q8IX03 1113 aa6.58□□□□□ -1.36
LRRC49-221ENST00000560107 CARD14Q9BXL6 1004 aa6.58□□□□□ -1.36
LRRC49-221ENST00000560107 NEUROD2Q15784 382 aa6.57□□□□□ -1.36
LRRC49-221ENST00000560107 CNKSR2Q8WXI2 1034 aa6.57□□□□□ -1.36
LRRC49-221ENST00000560107 TNNQ9UQP3 1299 aa6.57□□□□□ -1.36
LRRC49-221ENST00000560107 SPHKAPQ2M3C7 1700 aa6.57□□□□□ -1.36
LRRC49-221ENST00000560107 ANTXR1Q9H6X2 564 aa6.57□□□□□ -1.36
LRRC49-221ENST00000560107 PCDHB15Q9Y5E8 787 aa6.57□□□□□ -1.36
LRRC49-221ENST00000560107 SCAPERQ9BY12 1400 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms