RNA–Protein interactions for RNA: ENST00000559779.1

CERNA1-201, Transcript of competing endogenous lncRNA 1 for miR-4707-5p and miR-4767, humanhuman

TSL 3 BASIC

Gene CERNA1, Length 908 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA1-201ENST00000559779 TMEM131LA2VDJ0 1609 aa24.58■■□□□ 1.53
CERNA1-201ENST00000559779 NAIPQ13075 1403 aa24.56■■□□□ 1.52
CERNA1-201ENST00000559779 RIMS2Q9UQ26 1411 aa24.56■■□□□ 1.52
CERNA1-201ENST00000559779 ZFYVE9O95405 1425 aa24.54■■□□□ 1.52
CERNA1-201ENST00000559779 DISP3Q9P2K9 1392 aa24.54■■□□□ 1.52
CERNA1-201ENST00000559779 KCNA6P17658 529 aa24.52■■□□□ 1.52
CERNA1-201ENST00000559779 NUTM2DQ5VT03 806 aaPredicted RBP24.52■■□□□ 1.52
CERNA1-201ENST00000559779 HSPA1LP34931 641 aa24.51■■□□□ 1.51
CERNA1-201ENST00000559779 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.51■■□□□ 1.51
CERNA1-201ENST00000559779 TRIM52Q96A61 297 aa24.51■■□□□ 1.51
CERNA1-201ENST00000559779 PLEKHG1Q9ULL1 1385 aa24.51■■□□□ 1.51
CERNA1-201ENST00000559779 HFM1A2PYH4 1435 aa24.49■■□□□ 1.51
CERNA1-201ENST00000559779 ALKQ9UM73 1620 aa24.49■■□□□ 1.51
CERNA1-201ENST00000559779 SPHKAPQ2M3C7 1700 aa24.49■■□□□ 1.51
CERNA1-201ENST00000559779 PROSER2Q86WR7 435 aaPredicted RBP24.48■■□□□ 1.51
CERNA1-201ENST00000559779 TMEM94Q12767 1356 aa24.46■■□□□ 1.51
CERNA1-201ENST00000559779 XIRP1Q702N8 1843 aaKnown RBP24.46■■□□□ 1.51
CERNA1-201ENST00000559779 RBM33Q96EV2 1170 aaKnown RBP24.45■■□□□ 1.5
CERNA1-201ENST00000559779 ZNF326Q5BKZ1 582 aaKnown RBP24.43■■□□□ 1.5
CERNA1-201ENST00000559779 TBX22Q9Y458 520 aa24.41■■□□□ 1.5
CERNA1-201ENST00000559779 NWD1Q149M9 1564 aa24.41■■□□□ 1.5
CERNA1-201ENST00000559779 NKTRP30414 1462 aaKnown RBP24.4■■□□□ 1.5
CERNA1-201ENST00000559779 SLC4A1APQ9BWU0 796 aaKnown RBP24.4■■□□□ 1.5
CERNA1-201ENST00000559779 TRPM2O94759 1503 aa24.38■■□□□ 1.49
CERNA1-201ENST00000559779 CHD2O14647 1828 aaKnown RBP24.38■■□□□ 1.49
CERNA1-201ENST00000559779 ADAMTS13Q76LX8 1427 aa24.37■■□□□ 1.49
CERNA1-201ENST00000559779 CLTCL1P53675 1640 aa24.37■■□□□ 1.49
CERNA1-201ENST00000559779 DIP2AQ14689 1571 aa24.34■■□□□ 1.49
CERNA1-201ENST00000559779 MSH6P52701 1360 aa24.33■■□□□ 1.49
CERNA1-201ENST00000559779 KIF1BO60333 1816 aa24.32■■□□□ 1.48
CERNA1-201ENST00000559779 ILDR2Q71H61 639 aa24.31■■□□□ 1.48
CERNA1-201ENST00000559779 C14orf37Q86TY3 774 aa24.31■■□□□ 1.48
CERNA1-201ENST00000559779 PIK3R4Q99570 1358 aa24.3■■□□□ 1.48
CERNA1-201ENST00000559779 FOXD1Q16676 465 aa24.28■■□□□ 1.48
CERNA1-201ENST00000559779 AMOTL2Q9Y2J4 779 aa24.28■■□□□ 1.48
CERNA1-201ENST00000559779 FAM135BQ49AJ0 1406 aa24.27■■□□□ 1.48
CERNA1-201ENST00000559779 NEXMIFQ5QGS0 1516 aa24.26■■□□□ 1.47
CERNA1-201ENST00000559779 SETBP1Q9Y6X0 1596 aa24.26■■□□□ 1.47
CERNA1-201ENST00000559779 MED1Q15648 1581 aaPredicted RBP24.25■■□□□ 1.47
CERNA1-201ENST00000559779 NRXN3Q9Y4C0 1643 aa24.25■■□□□ 1.47
CERNA1-201ENST00000559779 SLAIN2Q9P270 581 aa24.24■■□□□ 1.47
CERNA1-201ENST00000559779 ROBO1Q9Y6N7 1651 aa24.24■■□□□ 1.47
CERNA1-201ENST00000559779 MPHOSPH9Q99550 1183 aa24.23■■□□□ 1.47
CERNA1-201ENST00000559779 PTPRUQ92729 1446 aa24.23■■□□□ 1.47
CERNA1-201ENST00000559779 NCOA3Q9Y6Q9 1424 aa24.22■■□□□ 1.47
CERNA1-201ENST00000559779 VGFO15240 615 aaPredicted RBP24.21■■□□□ 1.47
CERNA1-201ENST00000559779 METP08581 1390 aa24.2■■□□□ 1.46
CERNA1-201ENST00000559779 ATF3P18847 181 aa24.19■■□□□ 1.46
CERNA1-201ENST00000559779 PHF23Q9BUL5 403 aaPredicted RBP24.19■■□□□ 1.46
CERNA1-201ENST00000559779 C19orf44Q9H6X5 657 aa24.19■■□□□ 1.46
CERNA1-201ENST00000559779 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
CERNA1-201ENST00000559779 RPGRIP1LQ68CZ1 1315 aa24.18■■□□□ 1.46
CERNA1-201ENST00000559779 CCDC144AA2RUR9 1427 aa24.18■■□□□ 1.46
CERNA1-201ENST00000559779 CADPS2Q86UW7 1296 aa24.17■■□□□ 1.46
CERNA1-201ENST00000559779 ACIN1Q9UKV3 1341 aaKnown RBP24.16■■□□□ 1.46
CERNA1-201ENST00000559779 XRN1Q8IZH2 1706 aaKnown RBP24.15■■□□□ 1.46
CERNA1-201ENST00000559779 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.15■■□□□ 1.46
CERNA1-201ENST00000559779 RGL3Q3MIN7 710 aa24.13■■□□□ 1.45
CERNA1-201ENST00000559779 PPLO60437 1756 aa24.12■■□□□ 1.45
CERNA1-201ENST00000559779 SOCS7O14512 581 aa24.11■■□□□ 1.45
CERNA1-201ENST00000559779 PHLPP1O60346 1717 aa24.1■■□□□ 1.45
CERNA1-201ENST00000559779 RAB3GAP2Q9H2M9 1393 aa24.1■■□□□ 1.45
CERNA1-201ENST00000559779 DCCP43146 1447 aa24.05■■□□□ 1.44
CERNA1-201ENST00000559779 SPATA31E1Q6ZUB1 1445 aa24.05■■□□□ 1.44
CERNA1-201ENST00000559779 SETD1AO15047 1707 aaKnown RBP24.04■■□□□ 1.44
CERNA1-201ENST00000559779 ADGRF5Q8IZF2 1346 aa24.04■■□□□ 1.44
CERNA1-201ENST00000559779 ADGRL3Q9HAR2 1447 aa24.02■■□□□ 1.44
CERNA1-201ENST00000559779 ANKRD30BQ9BXX2 1392 aa24.02■■□□□ 1.44
CERNA1-201ENST00000559779 BRINP3Q76B58 766 aa24.01■■□□□ 1.43
CERNA1-201ENST00000559779 ROBO2Q9HCK4 1378 aa24.01■■□□□ 1.43
CERNA1-201ENST00000559779 JCADQ9P266 1359 aa24.01■■□□□ 1.43
CERNA1-201ENST00000559779 NALCNQ8IZF0 1738 aa24■■□□□ 1.43
CERNA1-201ENST00000559779 PTCH1Q13635 1447 aa24■■□□□ 1.43
CERNA1-201ENST00000559779 COL16A1Q07092 1604 aaPredicted RBP23.99■■□□□ 1.43
CERNA1-201ENST00000559779 MST1RQ04912 1400 aa23.99■■□□□ 1.43
CERNA1-201ENST00000559779 IFT172Q9UG01 1749 aa23.98■■□□□ 1.43
CERNA1-201ENST00000559779 AHDC1Q5TGY3 1603 aaPredicted RBP23.97■■□□□ 1.43
CERNA1-201ENST00000559779 ASXL1Q8IXJ9 1541 aa23.95■■□□□ 1.43
CERNA1-201ENST00000559779 STK26Q9P289 416 aa23.95■■□□□ 1.42
CERNA1-201ENST00000559779 RGS17Q9UGC6 210 aaPredicted RBP23.93■■□□□ 1.42
CERNA1-201ENST00000559779 PRAG1Q86YV5 1406 aa23.93■■□□□ 1.42
CERNA1-201ENST00000559779 TMEM132EQ6IEE7 984 aa23.92■■□□□ 1.42
CERNA1-201ENST00000559779 PIK3C2GO75747 1445 aa23.92■■□□□ 1.42
CERNA1-201ENST00000559779 SPATA31A6Q5VVP1 1343 aa23.89■■□□□ 1.42
CERNA1-201ENST00000559779 HRCP23327 699 aa23.89■■□□□ 1.41
CERNA1-201ENST00000559779 C1orf167Q5SNV9 1468 aa23.88■■□□□ 1.41
CERNA1-201ENST00000559779 MEX3CQ5U5Q3 659 aaKnown RBP23.88■■□□□ 1.41
CERNA1-201ENST00000559779 DDX17Q92841 729 aaKnown RBP23.88■■□□□ 1.41
CERNA1-201ENST00000559779 LRPPRCP42704 1394 aaKnown RBP23.88■■□□□ 1.41
CERNA1-201ENST00000559779 WAPLQ7Z5K2 1190 aa23.87■■□□□ 1.41
CERNA1-201ENST00000559779 NHSL1Q5SYE7 1610 aa23.87■■□□□ 1.41
CERNA1-201ENST00000559779 SHPRHQ149N8 1683 aa23.86■■□□□ 1.41
CERNA1-201ENST00000559779 LRRC59Q96AG4 307 aaKnown RBP23.85■■□□□ 1.41
CERNA1-201ENST00000559779 ORAI2Q96SN7 254 aa23.85■■□□□ 1.41
CERNA1-201ENST00000559779 C14orf93Q9H972 538 aaKnown RBP23.85■■□□□ 1.41
CERNA1-201ENST00000559779 MYOM2P54296 1465 aa23.85■■□□□ 1.41
CERNA1-201ENST00000559779 ABCC11Q96J66 1382 aa23.84■■□□□ 1.41
CERNA1-201ENST00000559779 NUTM2BA6NNL0 878 aaPredicted RBP23.84■■□□□ 1.41
CERNA1-201ENST00000559779 NUTM2EB1AL46 878 aaPredicted RBP23.84■■□□□ 1.41
CERNA1-201ENST00000559779 CFAP70Q5T0N1 1121 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms