RNA–Protein interactions for RNA: ENST00000559778.5

CPNE6-213, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-213ENST00000559778 ROBO1Q9Y6N7 1651 aa25.24■■□□□ 1.63
CPNE6-213ENST00000559778 TMEM131LA2VDJ0 1609 aa25.23■■□□□ 1.63
CPNE6-213ENST00000559778 CHD2O14647 1828 aaKnown RBP25.21■■□□□ 1.63
CPNE6-213ENST00000559778 NKTRP30414 1462 aaKnown RBP25.19■■□□□ 1.62
CPNE6-213ENST00000559778 FAM135BQ49AJ0 1406 aa25.19■■□□□ 1.62
CPNE6-213ENST00000559778 TMEM94Q12767 1356 aa25.18■■□□□ 1.62
CPNE6-213ENST00000559778 ZFYVE9O95405 1425 aa25.15■■□□□ 1.62
CPNE6-213ENST00000559778 KCNA6P17658 529 aa25.13■■□□□ 1.61
CPNE6-213ENST00000559778 SLC26A8Q96RN1 970 aa25.12■■□□□ 1.61
CPNE6-213ENST00000559778 PHLPP1O60346 1717 aa25.11■■□□□ 1.61
CPNE6-213ENST00000559778 SPHKAPQ2M3C7 1700 aa25.11■■□□□ 1.61
CPNE6-213ENST00000559778 RGS17Q9UGC6 210 aaPredicted RBP25.1■■□□□ 1.61
CPNE6-213ENST00000559778 PLEKHG1Q9ULL1 1385 aa25.09■■□□□ 1.61
CPNE6-213ENST00000559778 RIMS2Q9UQ26 1411 aa25.09■■□□□ 1.61
CPNE6-213ENST00000559778 HDGFP51858 240 aaKnown RBP25.08■■□□□ 1.61
CPNE6-213ENST00000559778 NUP155O75694 1391 aa25.07■■□□□ 1.6
CPNE6-213ENST00000559778 RRBP1Q9P2E9 1410 aaKnown RBP25.07■■□□□ 1.6
CPNE6-213ENST00000559778 PROSER2Q86WR7 435 aaPredicted RBP25.07■■□□□ 1.6
CPNE6-213ENST00000559778 DIP2AQ14689 1571 aa25.05■■□□□ 1.6
CPNE6-213ENST00000559778 ITGAEP38570 1179 aa25.05■■□□□ 1.6
CPNE6-213ENST00000559778 PPARGC1BQ86YN6 1023 aaKnown RBP25.03■■□□□ 1.6
CPNE6-213ENST00000559778 RBM33Q96EV2 1170 aaKnown RBP25.03■■□□□ 1.6
CPNE6-213ENST00000559778 MSH6P52701 1360 aa25.03■■□□□ 1.6
CPNE6-213ENST00000559778 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.02■■□□□ 1.6
CPNE6-213ENST00000559778 PPP1R15AO75807 674 aaPredicted RBP25.01■■□□□ 1.59
CPNE6-213ENST00000559778 COL16A1Q07092 1604 aaPredicted RBP25.01■■□□□ 1.59
CPNE6-213ENST00000559778 BCANQ96GW7 911 aa24.99■■□□□ 1.59
CPNE6-213ENST00000559778 SETD1AO15047 1707 aaKnown RBP24.98■■□□□ 1.59
CPNE6-213ENST00000559778 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.98■■□□□ 1.59
CPNE6-213ENST00000559778 TBX22Q9Y458 520 aa24.97■■□□□ 1.59
CPNE6-213ENST00000559778 CHGAP10645 457 aaKnown RBP24.96■■□□□ 1.59
CPNE6-213ENST00000559778 KIF1BO60333 1816 aa24.96■■□□□ 1.59
CPNE6-213ENST00000559778 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.59
CPNE6-213ENST00000559778 PIK3R4Q99570 1358 aa24.94■■□□□ 1.58
CPNE6-213ENST00000559778 TRPM2O94759 1503 aa24.94■■□□□ 1.58
CPNE6-213ENST00000559778 NAIPQ13075 1403 aa24.94■■□□□ 1.58
CPNE6-213ENST00000559778 NCOA3Q9Y6Q9 1424 aa24.94■■□□□ 1.58
CPNE6-213ENST00000559778 POTEAQ6S8J7 498 aa24.93■■□□□ 1.58
CPNE6-213ENST00000559778 SHPRHQ149N8 1683 aa24.92■■□□□ 1.58
CPNE6-213ENST00000559778 SLAIN2Q9P270 581 aa24.92■■□□□ 1.58
CPNE6-213ENST00000559778 CLTCL1P53675 1640 aa24.91■■□□□ 1.58
CPNE6-213ENST00000559778 NRXN3Q9Y4C0 1643 aa24.91■■□□□ 1.58
CPNE6-213ENST00000559778 JCADQ9P266 1359 aa24.91■■□□□ 1.58
CPNE6-213ENST00000559778 AHDC1Q5TGY3 1603 aaPredicted RBP24.9■■□□□ 1.58
CPNE6-213ENST00000559778 SETBP1Q9Y6X0 1596 aa24.9■■□□□ 1.58
CPNE6-213ENST00000559778 HFM1A2PYH4 1435 aa24.87■■□□□ 1.57
CPNE6-213ENST00000559778 XRN1Q8IZH2 1706 aaKnown RBP24.86■■□□□ 1.57
CPNE6-213ENST00000559778 LRP6O75581 1613 aa24.84■■□□□ 1.57
CPNE6-213ENST00000559778 NUTM2DQ5VT03 806 aaPredicted RBP24.84■■□□□ 1.57
CPNE6-213ENST00000559778 NEXMIFQ5QGS0 1516 aa24.83■■□□□ 1.57
CPNE6-213ENST00000559778 NHSL1Q5SYE7 1610 aa24.79■■□□□ 1.56
CPNE6-213ENST00000559778 C14orf37Q86TY3 774 aa24.79■■□□□ 1.56
CPNE6-213ENST00000559778 PTPRUQ92729 1446 aa24.78■■□□□ 1.56
CPNE6-213ENST00000559778 CADPS2Q86UW7 1296 aa24.78■■□□□ 1.56
CPNE6-213ENST00000559778 C19orf44Q9H6X5 657 aa24.77■■□□□ 1.56
CPNE6-213ENST00000559778 SPATA31A6Q5VVP1 1343 aa24.77■■□□□ 1.56
CPNE6-213ENST00000559778 ZNF326Q5BKZ1 582 aaKnown RBP24.76■■□□□ 1.55
CPNE6-213ENST00000559778 DCCP43146 1447 aa24.76■■□□□ 1.55
CPNE6-213ENST00000559778 PPLO60437 1756 aa24.75■■□□□ 1.55
CPNE6-213ENST00000559778 AMOTL2Q9Y2J4 779 aa24.75■■□□□ 1.55
CPNE6-213ENST00000559778 NALCNQ8IZF0 1738 aa24.74■■□□□ 1.55
CPNE6-213ENST00000559778 ATF3P18847 181 aa24.73■■□□□ 1.55
CPNE6-213ENST00000559778 ASXL1Q8IXJ9 1541 aa24.71■■□□□ 1.55
CPNE6-213ENST00000559778 TRIM52Q96A61 297 aa24.7■■□□□ 1.54
CPNE6-213ENST00000559778 METP08581 1390 aa24.68■■□□□ 1.54
CPNE6-213ENST00000559778 BRINP3Q76B58 766 aa24.67■■□□□ 1.54
CPNE6-213ENST00000559778 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
CPNE6-213ENST00000559778 MST1RQ04912 1400 aa24.67■■□□□ 1.54
CPNE6-213ENST00000559778 MEX3CQ5U5Q3 659 aaKnown RBP24.65■■□□□ 1.54
CPNE6-213ENST00000559778 RPGRIP1LQ68CZ1 1315 aa24.64■■□□□ 1.54
CPNE6-213ENST00000559778 ZNF772Q68DY9 489 aaPredicted RBP24.64■■□□□ 1.54
CPNE6-213ENST00000559778 IFT172Q9UG01 1749 aa24.64■■□□□ 1.53
CPNE6-213ENST00000559778 SETD5Q9C0A6 1442 aa24.63■■□□□ 1.53
CPNE6-213ENST00000559778 VGFO15240 615 aaPredicted RBP24.63■■□□□ 1.53
CPNE6-213ENST00000559778 ADGRL3Q9HAR2 1447 aa24.62■■□□□ 1.53
CPNE6-213ENST00000559778 PRAG1Q86YV5 1406 aa24.61■■□□□ 1.53
CPNE6-213ENST00000559778 LAMC1P11047 1609 aa24.61■■□□□ 1.53
CPNE6-213ENST00000559778 PTCH1Q13635 1447 aa24.61■■□□□ 1.53
CPNE6-213ENST00000559778 CDK12Q9NYV4 1490 aaPredicted RBP24.59■■□□□ 1.53
CPNE6-213ENST00000559778 ACIN1Q9UKV3 1341 aaKnown RBP24.57■■□□□ 1.52
CPNE6-213ENST00000559778 CCDC144AA2RUR9 1427 aa24.55■■□□□ 1.52
CPNE6-213ENST00000559778 NUTM2BA6NNL0 878 aaPredicted RBP24.53■■□□□ 1.52
CPNE6-213ENST00000559778 NUTM2EB1AL46 878 aaPredicted RBP24.53■■□□□ 1.52
CPNE6-213ENST00000559778 NUTM2AQ8IVF1 878 aaPredicted RBP24.53■■□□□ 1.52
CPNE6-213ENST00000559778 UPF1Q92900 1129 aaKnown RBP eCLIP24.53■■□□□ 1.52
CPNE6-213ENST00000559778 RXRBP28702 533 aa24.51■■□□□ 1.51
CPNE6-213ENST00000559778 AFF2P51816 1311 aa24.51■■□□□ 1.51
CPNE6-213ENST00000559778 PNPLA6Q8IY17 1366 aa24.51■■□□□ 1.51
CPNE6-213ENST00000559778 SPATA31E1Q6ZUB1 1445 aa24.51■■□□□ 1.51
CPNE6-213ENST00000559778 LRRC59Q96AG4 307 aaKnown RBP24.5■■□□□ 1.51
CPNE6-213ENST00000559778 MPHOSPH9Q99550 1183 aa24.5■■□□□ 1.51
CPNE6-213ENST00000559778 KNDC1Q76NI1 1749 aa24.49■■□□□ 1.51
CPNE6-213ENST00000559778 ROBO2Q9HCK4 1378 aa24.49■■□□□ 1.51
CPNE6-213ENST00000559778 FOXD1Q16676 465 aa24.48■■□□□ 1.51
CPNE6-213ENST00000559778 C1orf167Q5SNV9 1468 aa24.48■■□□□ 1.51
CPNE6-213ENST00000559778 ANKRD30BQ9BXX2 1392 aa24.47■■□□□ 1.51
CPNE6-213ENST00000559778 DDX17Q92841 729 aaKnown RBP24.46■■□□□ 1.51
CPNE6-213ENST00000559778 CDC42BPGQ6DT37 1551 aa24.46■■□□□ 1.51
CPNE6-213ENST00000559778 MARF1Q9Y4F3 1742 aaKnown RBP24.45■■□□□ 1.5
CPNE6-213ENST00000559778 COL22A1Q8NFW1 1626 aaPredicted RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms