RNA–Protein interactions for RNA: ENST00000559422.1

LRRC49-216, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 727 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-216ENST00000559422 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
LRRC49-216ENST00000559422 HDGFP51858 240 aaKnown RBP13.05□□□□□ -0.32
LRRC49-216ENST00000559422 POTEGQ6S5H5 508 aa13.05□□□□□ -0.32
LRRC49-216ENST00000559422 SULF1Q8IWU6 871 aa13.05□□□□□ -0.32
LRRC49-216ENST00000559422 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
LRRC49-216ENST00000559422 KRTAP3-3Q9BYR6 98 aa13.05□□□□□ -0.32
LRRC49-216ENST00000559422 KRTAP3-2Q9BYR7 98 aa13.05□□□□□ -0.32
LRRC49-216ENST00000559422 PLEKHG3A1L390 1219 aa13.04□□□□□ -0.32
LRRC49-216ENST00000559422 POTEMA6NI47 508 aa13.03□□□□□ -0.32
LRRC49-216ENST00000559422 SWT1Q5T5J6 900 aaKnown RBP13.01□□□□□ -0.33
LRRC49-216ENST00000559422 ZFRQ96KR1 1074 aaKnown RBP13.01□□□□□ -0.33
LRRC49-216ENST00000559422 STAC3Q96MF2 364 aa13.01□□□□□ -0.33
LRRC49-216ENST00000559422 BEGAINQ9BUH8 593 aa13.01□□□□□ -0.33
LRRC49-216ENST00000559422 CD46P15529 392 aa13□□□□□ -0.33
LRRC49-216ENST00000559422 DDX11L8A8MPP1 907 aa12.99□□□□□ -0.33
LRRC49-216ENST00000559422 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
LRRC49-216ENST00000559422 CDAN1Q8IWY9 1227 aa12.99□□□□□ -0.33
LRRC49-216ENST00000559422 SLC4A3P48751 1232 aa12.98□□□□□ -0.33
LRRC49-216ENST00000559422 SAMD7Q7Z3H4 446 aa12.98□□□□□ -0.33
LRRC49-216ENST00000559422 SLF2Q8IX21 1173 aa12.97□□□□□ -0.33
LRRC49-216ENST00000559422 GOPCQ9HD26 462 aa12.97□□□□□ -0.33
LRRC49-216ENST00000559422 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
LRRC49-216ENST00000559422 GOLGA8CPA6NN73 597 aa12.94□□□□□ -0.34
LRRC49-216ENST00000559422 DIXDC1Q155Q3 683 aa12.94□□□□□ -0.34
LRRC49-216ENST00000559422 RDH13Q8NBN7 331 aa12.94□□□□□ -0.34
LRRC49-216ENST00000559422 SLC10A3P09131 477 aa12.92□□□□□ -0.34
LRRC49-216ENST00000559422 LRCH3Q96II8 777 aa12.92□□□□□ -0.34
LRRC49-216ENST00000559422 SH3D19Q5HYK7 790 aa12.91□□□□□ -0.34
LRRC49-216ENST00000559422 ANKK1Q8NFD2 765 aa12.91□□□□□ -0.34
LRRC49-216ENST00000559422 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.91□□□□□ -0.34
LRRC49-216ENST00000559422 GCGRP47871 477 aa12.9□□□□□ -0.34
LRRC49-216ENST00000559422 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
LRRC49-216ENST00000559422 TBC1D2Q9BYX2 928 aa12.9□□□□□ -0.34
LRRC49-216ENST00000559422 SOWAHBA6NEL2 793 aa12.88□□□□□ -0.35
LRRC49-216ENST00000559422 SKIV2LQ15477 1246 aaKnown RBP12.88□□□□□ -0.35
LRRC49-216ENST00000559422 NUTM1Q86Y26 1132 aa12.88□□□□□ -0.35
LRRC49-216ENST00000559422 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
LRRC49-216ENST00000559422 WNT2BQ93097 391 aa12.87□□□□□ -0.35
LRRC49-216ENST00000559422 RNF40O75150 1001 aa12.86□□□□□ -0.35
LRRC49-216ENST00000559422 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
LRRC49-216ENST00000559422 PCDH10Q9P2E7 1040 aa12.86□□□□□ -0.35
LRRC49-216ENST00000559422 GTF3C3Q9Y5Q9 886 aa12.86□□□□□ -0.35
LRRC49-216ENST00000559422 KDM4AO75164 1064 aa12.85□□□□□ -0.35
LRRC49-216ENST00000559422 USP46P62068 366 aa12.85□□□□□ -0.35
LRRC49-216ENST00000559422 PCMTD1Q96MG8 357 aaPredicted RBP12.84□□□□□ -0.35
LRRC49-216ENST00000559422 CFHP08603 1231 aa12.82□□□□□ -0.36
LRRC49-216ENST00000559422 TSR3Q9UJK0 312 aaKnown RBP12.82□□□□□ -0.36
LRRC49-216ENST00000559422 GJA5P36382 358 aa12.81□□□□□ -0.36
LRRC49-216ENST00000559422 BCAMP50895 628 aa12.81□□□□□ -0.36
LRRC49-216ENST00000559422 PPP4CP60510 307 aa12.81□□□□□ -0.36
LRRC49-216ENST00000559422 KMT5BQ4FZB7 885 aa12.81□□□□□ -0.36
LRRC49-216ENST00000559422 POLR3EQ9NVU0 708 aa12.81□□□□□ -0.36
LRRC49-216ENST00000559422 PRR14Q9BWN1 585 aa12.8□□□□□ -0.36
LRRC49-216ENST00000559422 HPS5Q9UPZ3 1129 aa12.8□□□□□ -0.36
LRRC49-216ENST00000559422 SPTLC1O15269 473 aa12.79□□□□□ -0.36
LRRC49-216ENST00000559422 CLK2P49760 499 aaKnown RBP12.79□□□□□ -0.36
LRRC49-216ENST00000559422 TUSC1Q2TAM9 212 aa12.79□□□□□ -0.36
LRRC49-216ENST00000559422 RIC3Q7Z5B4 369 aa12.79□□□□□ -0.36
LRRC49-216ENST00000559422 MOXD2PA6NHM9 499 aa12.78□□□□□ -0.36
LRRC49-216ENST00000559422 HOXA2O43364 376 aa12.78□□□□□ -0.36
LRRC49-216ENST00000559422 RSBN1LQ6PCB5 846 aaPredicted RBP12.78□□□□□ -0.36
LRRC49-216ENST00000559422 THSD4Q6ZMP0 1018 aa12.78□□□□□ -0.36
LRRC49-216ENST00000559422 GRIPAP1Q4V328 841 aa12.77□□□□□ -0.37
LRRC49-216ENST00000559422 PROCA1Q8NCQ7 364 aaPredicted RBP12.77□□□□□ -0.37
LRRC49-216ENST00000559422 ACTN4O43707 911 aaKnown RBP12.76□□□□□ -0.37
LRRC49-216ENST00000559422 FUT2Q10981 343 aa12.76□□□□□ -0.37
LRRC49-216ENST00000559422 KCTD12Q96CX2 325 aaKnown RBP12.76□□□□□ -0.37
LRRC49-216ENST00000559422 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.76□□□□□ -0.37
LRRC49-216ENST00000559422 NDUFV2P19404 249 aa12.75□□□□□ -0.37
LRRC49-216ENST00000559422 ATP6V1AP38606 617 aa12.75□□□□□ -0.37
LRRC49-216ENST00000559422 LIMD1Q9UGP4 676 aa12.75□□□□□ -0.37
LRRC49-216ENST00000559422 WBP1LQ9NX94 342 aa12.73□□□□□ -0.37
LRRC49-216ENST00000559422 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
LRRC49-216ENST00000559422 APLP1P51693 650 aa12.72□□□□□ -0.37
LRRC49-216ENST00000559422 ATP1B4Q9UN42 357 aaPredicted RBP12.72□□□□□ -0.37
LRRC49-216ENST00000559422 FDX1P10109 184 aa12.71□□□□□ -0.37
LRRC49-216ENST00000559422 NYAP1Q6ZVC0 841 aa12.71□□□□□ -0.37
LRRC49-216ENST00000559422 PRPF38BQ5VTL8 546 aaKnown RBP12.69□□□□□ -0.38
LRRC49-216ENST00000559422 MORN1Q5T089 497 aa12.68□□□□□ -0.38
LRRC49-216ENST00000559422 PPP2R2DQ66LE6 453 aa12.68□□□□□ -0.38
LRRC49-216ENST00000559422 PCDHGC3Q9UN70 934 aa12.68□□□□□ -0.38
LRRC49-216ENST00000559422 PCDHB15Q9Y5E8 787 aa12.68□□□□□ -0.38
LRRC49-216ENST00000559422 LILRB3O75022 631 aa12.67□□□□□ -0.38
LRRC49-216ENST00000559422 HLA-CQ95604 372 aa12.67□□□□□ -0.38
LRRC49-216ENST00000559422 GUCA2AQ02747 115 aa12.66□□□□□ -0.38
LRRC49-216ENST00000559422 SPNS2Q8IVW8 549 aa12.66□□□□□ -0.38
LRRC49-216ENST00000559422 CSPP1Q1MSJ5 1256 aa12.65□□□□□ -0.38
LRRC49-216ENST00000559422 PUS10Q3MIT2 529 aaKnown RBP12.65□□□□□ -0.38
LRRC49-216ENST00000559422 ZBTB3Q9H5J0 574 aa12.65□□□□□ -0.38
LRRC49-216ENST00000559422 PCDHB3Q9Y5E6 796 aa12.65□□□□□ -0.38
LRRC49-216ENST00000559422 PTPN5P54829 565 aa12.64□□□□□ -0.39
LRRC49-216ENST00000559422 QPCTQ16769 361 aa12.64□□□□□ -0.39
LRRC49-216ENST00000559422 SLC27A5Q9Y2P5 690 aa12.63□□□□□ -0.39
LRRC49-216ENST00000559422 HRCP23327 699 aa12.62□□□□□ -0.39
LRRC49-216ENST00000559422 RFC5P40937 340 aa12.62□□□□□ -0.39
LRRC49-216ENST00000559422 Q3C1V9 767 aa12.62□□□□□ -0.39
LRRC49-216ENST00000559422 FBXO31Q5XUX0 539 aaPredicted RBP12.62□□□□□ -0.39
LRRC49-216ENST00000559422 ERICH6Q7L0X2 663 aa12.62□□□□□ -0.39
LRRC49-216ENST00000559422 SPDYE5A6NIY4 337 aa12.61□□□□□ -0.39
LRRC49-216ENST00000559422 NUTM2BA6NNL0 878 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms