RNA–Protein interactions for RNA: ENST00000559422.1

LRRC49-216, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 727 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-216ENST00000559422 AEBP2Q6ZN18 517 aaPredicted RBP30.07■■■□□ 2.4
LRRC49-216ENST00000559422 CHIC1Q5VXU3 224 aa29.7■■■□□ 2.35
LRRC49-216ENST00000559422 PHF23Q9BUL5 403 aaPredicted RBP26.13■■□□□ 1.77
LRRC49-216ENST00000559422 SENP3Q9H4L4 574 aaPredicted RBP25.51■■□□□ 1.67
LRRC49-216ENST00000559422 PLPPR3Q6T4P5 718 aa24.26■■□□□ 1.47
LRRC49-216ENST00000559422 FOXD1Q16676 465 aa23.61■■□□□ 1.37
LRRC49-216ENST00000559422 PPP6R1Q9UPN7 881 aa22.94■■□□□ 1.26
LRRC49-216ENST00000559422 ADRA2BP18089 450 aa22.93■■□□□ 1.26
LRRC49-216ENST00000559422 PIAS4Q8N2W9 510 aaPredicted RBP22.32■■□□□ 1.16
LRRC49-216ENST00000559422 MSH5O43196 834 aa21.69■■□□□ 1.06
LRRC49-216ENST00000559422 PPP4R3CPQ6ZMV5 832 aa21.39■■□□□ 1.01
LRRC49-216ENST00000559422 KCNA4P22459 653 aa21.22■□□□□ 0.99
LRRC49-216ENST00000559422 SCAF1Q9H7N4 1312 aaKnown RBP21.05■□□□□ 0.96
LRRC49-216ENST00000559422 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
LRRC49-216ENST00000559422 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
LRRC49-216ENST00000559422 MAPK8IP2Q13387 824 aaPredicted RBP20.71■□□□□ 0.91
LRRC49-216ENST00000559422 NPM3O75607 178 aaKnown RBP20.61■□□□□ 0.89
LRRC49-216ENST00000559422 DMRT2Q9Y5R5 561 aa20.41■□□□□ 0.86
LRRC49-216ENST00000559422 RNF216Q9NWF9 866 aaPredicted RBP20.28■□□□□ 0.84
LRRC49-216ENST00000559422 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.84
LRRC49-216ENST00000559422 HOXD11P31277 338 aaPredicted RBP20.12■□□□□ 0.81
LRRC49-216ENST00000559422 DNAJC5BQ9UF47 199 aa20.08■□□□□ 0.81
LRRC49-216ENST00000559422 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
LRRC49-216ENST00000559422 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
LRRC49-216ENST00000559422 ZBTB22O15209 634 aa19.52■□□□□ 0.72
LRRC49-216ENST00000559422 FOXD4L1Q9NU39 408 aa19.47■□□□□ 0.71
LRRC49-216ENST00000559422 DCAF8L1A6NGE4 600 aa19.43■□□□□ 0.7
LRRC49-216ENST00000559422 SLC4A2P04920 1241 aa19.39■□□□□ 0.69
LRRC49-216ENST00000559422 POTEDQ86YR6 584 aa19.17■□□□□ 0.66
LRRC49-216ENST00000559422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.13■□□□□ 0.65
LRRC49-216ENST00000559422 MYCNP04198 464 aaPredicted RBP19.06■□□□□ 0.64
LRRC49-216ENST00000559422 U3KPZ7 1027 aaPredicted RBP18.86■□□□□ 0.61
LRRC49-216ENST00000559422 ATXN8OSP0DMR3 200 aa18.82■□□□□ 0.6
LRRC49-216ENST00000559422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
LRRC49-216ENST00000559422 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
LRRC49-216ENST00000559422 SAMD1Q6SPF0 538 aaPredicted RBP18.72■□□□□ 0.59
LRRC49-216ENST00000559422 RNF39Q9H2S5 420 aa18.6■□□□□ 0.57
LRRC49-216ENST00000559422 APLP2Q06481 763 aa18.51■□□□□ 0.55
LRRC49-216ENST00000559422 ATF5Q9Y2D1 282 aaPredicted RBP18.48■□□□□ 0.55
LRRC49-216ENST00000559422 C1QBPQ07021 282 aaKnown RBP18.42■□□□□ 0.54
LRRC49-216ENST00000559422 SPINK5Q9NQ38 1064 aaPredicted RBP18.22■□□□□ 0.51
LRRC49-216ENST00000559422 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
LRRC49-216ENST00000559422 CAPN15O75808 1086 aa18.14■□□□□ 0.49
LRRC49-216ENST00000559422 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
LRRC49-216ENST00000559422 POLA2Q14181 598 aa17.92■□□□□ 0.46
LRRC49-216ENST00000559422 CACNB1Q02641 598 aaPredicted RBP17.87■□□□□ 0.45
LRRC49-216ENST00000559422 DSG3P32926 999 aa17.8■□□□□ 0.44
LRRC49-216ENST00000559422 ABCB7O75027 752 aa17.79■□□□□ 0.44
LRRC49-216ENST00000559422 FKBP8Q14318 412 aa17.75■□□□□ 0.43
LRRC49-216ENST00000559422 FBLN2P98095 1184 aa17.72■□□□□ 0.43
LRRC49-216ENST00000559422 MKRN4PQ13434 485 aaPredicted RBP17.71■□□□□ 0.43
LRRC49-216ENST00000559422 ZBTB12Q9Y330 459 aaPredicted RBP17.7■□□□□ 0.42
LRRC49-216ENST00000559422 SPDYE4A6NLX3 237 aa17.47■□□□□ 0.39
LRRC49-216ENST00000559422 OSCARQ8IYS5 282 aa17.27■□□□□ 0.36
LRRC49-216ENST00000559422 PROM2Q8N271 834 aa17.27■□□□□ 0.36
LRRC49-216ENST00000559422 SPDYE2BA6NHP3 402 aa17.23■□□□□ 0.35
LRRC49-216ENST00000559422 SPDYE6P0CI01 402 aa17.23■□□□□ 0.35
LRRC49-216ENST00000559422 SPDYE2Q495Y8 402 aa17.23■□□□□ 0.35
LRRC49-216ENST00000559422 ZNF692Q9BU19 519 aaPredicted RBP17.19■□□□□ 0.34
LRRC49-216ENST00000559422 SSUH2Q9Y2M2 353 aa17.13■□□□□ 0.33
LRRC49-216ENST00000559422 FBXO3Q9UK99 471 aa17.1■□□□□ 0.33
LRRC49-216ENST00000559422 RBM42Q9BTD8 480 aaKnown RBP16.97■□□□□ 0.31
LRRC49-216ENST00000559422 PABPN1Q86U42 306 aaKnown RBP eCLIP16.96■□□□□ 0.31
LRRC49-216ENST00000559422 AKT1S1Q96B36 256 aa16.83■□□□□ 0.28
LRRC49-216ENST00000559422 VASPP50552 380 aaPredicted RBP16.82■□□□□ 0.28
LRRC49-216ENST00000559422 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
LRRC49-216ENST00000559422 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
LRRC49-216ENST00000559422 RTN4Q9NQC3 1192 aaKnown RBP16.66■□□□□ 0.26
LRRC49-216ENST00000559422 REM2Q8IYK8 340 aaPredicted RBP16.64■□□□□ 0.25
LRRC49-216ENST00000559422 SPDYE1Q8NFV5 336 aaPredicted RBP16.64■□□□□ 0.25
LRRC49-216ENST00000559422 IFNLR1Q8IU57 520 aaPredicted RBP16.61■□□□□ 0.25
LRRC49-216ENST00000559422 MIER1Q8N108 512 aa16.53■□□□□ 0.24
LRRC49-216ENST00000559422 PLCD3Q8N3E9 789 aa16.53■□□□□ 0.24
LRRC49-216ENST00000559422 CLEC11AQ9Y240 323 aa16.5■□□□□ 0.23
LRRC49-216ENST00000559422 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
LRRC49-216ENST00000559422 KLHL34Q8N239 644 aa16.45■□□□□ 0.22
LRRC49-216ENST00000559422 PITPNM1O00562 1244 aa16.43■□□□□ 0.22
LRRC49-216ENST00000559422 PRR29P0C7W0 189 aa16.43■□□□□ 0.22
LRRC49-216ENST00000559422 SPOCK2Q92563 424 aa16.38■□□□□ 0.21
LRRC49-216ENST00000559422 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
LRRC49-216ENST00000559422 CREBZFQ9NS37 354 aa16.29■□□□□ 0.2
LRRC49-216ENST00000559422 MNX1P50219 401 aaPredicted RBP16.18■□□□□ 0.18
LRRC49-216ENST00000559422 PKD2Q13563 968 aa16.18■□□□□ 0.18
LRRC49-216ENST00000559422 CHRDL2Q6WN34 429 aa16.11■□□□□ 0.17
LRRC49-216ENST00000559422 FXR2P51116 673 aaKnown RBP eCLIP16.1■□□□□ 0.17
LRRC49-216ENST00000559422 NUBP1P53384 320 aa16.09■□□□□ 0.17
LRRC49-216ENST00000559422 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
LRRC49-216ENST00000559422 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
LRRC49-216ENST00000559422 CIZ1Q9ULV3 898 aaPredicted RBP16.03■□□□□ 0.16
LRRC49-216ENST00000559422 PRKAR2AP13861 404 aaKnown RBP16.02■□□□□ 0.16
LRRC49-216ENST00000559422 GSE1Q14687 1217 aa16.01■□□□□ 0.15
LRRC49-216ENST00000559422 ECM2O94769 699 aaPredicted RBP16■□□□□ 0.15
LRRC49-216ENST00000559422 FARP1Q9Y4F1 1045 aaPredicted RBP15.99■□□□□ 0.15
LRRC49-216ENST00000559422 PIP4P2Q8N4L2 257 aa15.98■□□□□ 0.15
LRRC49-216ENST00000559422 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
LRRC49-216ENST00000559422 FAM212AQ96EL1 285 aa15.95■□□□□ 0.14
LRRC49-216ENST00000559422 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
LRRC49-216ENST00000559422 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
LRRC49-216ENST00000559422 RGL2O15211 777 aa15.83■□□□□ 0.12
LRRC49-216ENST00000559422 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms