RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 RBM33Q96EV2 1170 aaKnown RBP31.42■■■□□ 2.62
TSPAN3-206ENST00000559373 ROCK1Q13464 1354 aa31.42■■■□□ 2.62
TSPAN3-206ENST00000559373 CHGAP10645 457 aaKnown RBP31.41■■■□□ 2.62
TSPAN3-206ENST00000559373 MED1Q15648 1581 aaPredicted RBP31.39■■■□□ 2.62
TSPAN3-206ENST00000559373 CHD2O14647 1828 aaKnown RBP31.35■■■□□ 2.61
TSPAN3-206ENST00000559373 NUP155O75694 1391 aa31.35■■■□□ 2.61
TSPAN3-206ENST00000559373 NUTM2DQ5VT03 806 aaPredicted RBP31.35■■■□□ 2.61
TSPAN3-206ENST00000559373 RIMS2Q9UQ26 1411 aa31.34■■■□□ 2.61
TSPAN3-206ENST00000559373 ZFYVE9O95405 1425 aa31.32■■■□□ 2.61
TSPAN3-206ENST00000559373 TMEM94Q12767 1356 aa31.31■■■□□ 2.6
TSPAN3-206ENST00000559373 SOCS7O14512 581 aa31.31■■■□□ 2.6
TSPAN3-206ENST00000559373 PPP1R15AO75807 674 aaPredicted RBP31.31■■■□□ 2.6
TSPAN3-206ENST00000559373 KCNA6P17658 529 aa31.31■■■□□ 2.6
TSPAN3-206ENST00000559373 PROSER2Q86WR7 435 aaPredicted RBP31.31■■■□□ 2.6
TSPAN3-206ENST00000559373 SPHKAPQ2M3C7 1700 aa31.28■■■□□ 2.6
TSPAN3-206ENST00000559373 NWD1Q149M9 1564 aa31.27■■■□□ 2.6
TSPAN3-206ENST00000559373 PLEKHG1Q9ULL1 1385 aa31.24■■■□□ 2.59
TSPAN3-206ENST00000559373 ROBO1Q9Y6N7 1651 aa31.22■■■□□ 2.59
TSPAN3-206ENST00000559373 HDGFP51858 240 aaKnown RBP31.19■■■□□ 2.58
TSPAN3-206ENST00000559373 NKTRP30414 1462 aaKnown RBP31.19■■■□□ 2.58
TSPAN3-206ENST00000559373 RRBP1Q9P2E9 1410 aaKnown RBP31.18■■■□□ 2.58
TSPAN3-206ENST00000559373 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.15■■■□□ 2.58
TSPAN3-206ENST00000559373 PHF23Q9BUL5 403 aaPredicted RBP31.14■■■□□ 2.58
TSPAN3-206ENST00000559373 ADAMTS13Q76LX8 1427 aa31.13■■■□□ 2.57
TSPAN3-206ENST00000559373 KIF1BO60333 1816 aa31.11■■■□□ 2.57
TSPAN3-206ENST00000559373 TBX22Q9Y458 520 aa31.11■■■□□ 2.57
TSPAN3-206ENST00000559373 CLTCL1P53675 1640 aa31.1■■■□□ 2.57
TSPAN3-206ENST00000559373 NAIPQ13075 1403 aa31.1■■■□□ 2.57
TSPAN3-206ENST00000559373 FAM135BQ49AJ0 1406 aa31.1■■■□□ 2.57
TSPAN3-206ENST00000559373 MSH6P52701 1360 aa31.1■■■□□ 2.57
TSPAN3-206ENST00000559373 PHLPP1O60346 1717 aa31.07■■■□□ 2.56
TSPAN3-206ENST00000559373 ZNF326Q5BKZ1 582 aaKnown RBP31.07■■■□□ 2.56
TSPAN3-206ENST00000559373 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.07■■■□□ 2.56
TSPAN3-206ENST00000559373 NRXN3Q9Y4C0 1643 aa31.06■■■□□ 2.56
TSPAN3-206ENST00000559373 DIP2AQ14689 1571 aa31.06■■■□□ 2.56
TSPAN3-206ENST00000559373 C14orf37Q86TY3 774 aa31.05■■■□□ 2.56
TSPAN3-206ENST00000559373 TRPM2O94759 1503 aa31.03■■■□□ 2.56
TSPAN3-206ENST00000559373 TRIM52Q96A61 297 aa31.02■■■□□ 2.56
TSPAN3-206ENST00000559373 SLAIN2Q9P270 581 aa31.02■■■□□ 2.56
TSPAN3-206ENST00000559373 PTPRUQ92729 1446 aa31.01■■■□□ 2.55
TSPAN3-206ENST00000559373 AMOTL2Q9Y2J4 779 aa30.98■■■□□ 2.55
TSPAN3-206ENST00000559373 NEXMIFQ5QGS0 1516 aa30.95■■■□□ 2.55
TSPAN3-206ENST00000559373 SETBP1Q9Y6X0 1596 aa30.95■■■□□ 2.54
TSPAN3-206ENST00000559373 XRN1Q8IZH2 1706 aaKnown RBP30.94■■■□□ 2.54
TSPAN3-206ENST00000559373 RGS17Q9UGC6 210 aaPredicted RBP30.94■■■□□ 2.54
TSPAN3-206ENST00000559373 PIK3R4Q99570 1358 aa30.93■■■□□ 2.54
TSPAN3-206ENST00000559373 HFM1A2PYH4 1435 aa30.92■■■□□ 2.54
TSPAN3-206ENST00000559373 METP08581 1390 aa30.9■■■□□ 2.54
TSPAN3-206ENST00000559373 COL16A1Q07092 1604 aaPredicted RBP30.88■■■□□ 2.53
TSPAN3-206ENST00000559373 ATF3P18847 181 aa30.88■■■□□ 2.53
TSPAN3-206ENST00000559373 SLC4A1APQ9BWU0 796 aaKnown RBP30.88■■■□□ 2.53
TSPAN3-206ENST00000559373 C19orf44Q9H6X5 657 aa30.88■■■□□ 2.53
TSPAN3-206ENST00000559373 NCOA3Q9Y6Q9 1424 aa30.88■■■□□ 2.53
TSPAN3-206ENST00000559373 FOXD1Q16676 465 aa30.87■■■□□ 2.53
TSPAN3-206ENST00000559373 PPLO60437 1756 aa30.84■■■□□ 2.53
TSPAN3-206ENST00000559373 CADPS2Q86UW7 1296 aa30.84■■■□□ 2.53
TSPAN3-206ENST00000559373 SETD1AO15047 1707 aaKnown RBP30.83■■■□□ 2.53
TSPAN3-206ENST00000559373 NALCNQ8IZF0 1738 aa30.82■■■□□ 2.52
TSPAN3-206ENST00000559373 POTEAQ6S8J7 498 aa30.78■■■□□ 2.52
TSPAN3-206ENST00000559373 JCADQ9P266 1359 aa30.77■■■□□ 2.52
TSPAN3-206ENST00000559373 AHDC1Q5TGY3 1603 aaPredicted RBP30.76■■■□□ 2.51
TSPAN3-206ENST00000559373 BRINP3Q76B58 766 aa30.74■■■□□ 2.51
TSPAN3-206ENST00000559373 SHPRHQ149N8 1683 aa30.72■■■□□ 2.51
TSPAN3-206ENST00000559373 VGFO15240 615 aaPredicted RBP30.7■■■□□ 2.51
TSPAN3-206ENST00000559373 MST1RQ04912 1400 aa30.7■■■□□ 2.5
TSPAN3-206ENST00000559373 LRP6O75581 1613 aa30.69■■■□□ 2.5
TSPAN3-206ENST00000559373 NHSL1Q5SYE7 1610 aa30.69■■■□□ 2.5
TSPAN3-206ENST00000559373 ASXL1Q8IXJ9 1541 aa30.68■■■□□ 2.5
TSPAN3-206ENST00000559373 DCCP43146 1447 aa30.68■■■□□ 2.5
TSPAN3-206ENST00000559373 DDX17Q92841 729 aaKnown RBP30.68■■■□□ 2.5
TSPAN3-206ENST00000559373 ADGRL3Q9HAR2 1447 aa30.66■■■□□ 2.5
TSPAN3-206ENST00000559373 RGL3Q3MIN7 710 aa30.66■■■□□ 2.5
TSPAN3-206ENST00000559373 IFT172Q9UG01 1749 aa30.66■■■□□ 2.5
TSPAN3-206ENST00000559373 MPHOSPH9Q99550 1183 aa30.64■■■□□ 2.5
TSPAN3-206ENST00000559373 RPGRIP1LQ68CZ1 1315 aa30.63■■■□□ 2.49
TSPAN3-206ENST00000559373 ROBO2Q9HCK4 1378 aa30.63■■■□□ 2.49
TSPAN3-206ENST00000559373 NUTM2BA6NNL0 878 aaPredicted RBP30.62■■■□□ 2.49
TSPAN3-206ENST00000559373 NUTM2EB1AL46 878 aaPredicted RBP30.62■■■□□ 2.49
TSPAN3-206ENST00000559373 MEX3CQ5U5Q3 659 aaKnown RBP30.62■■■□□ 2.49
TSPAN3-206ENST00000559373 NUTM2AQ8IVF1 878 aaPredicted RBP30.62■■■□□ 2.49
TSPAN3-206ENST00000559373 CCDC144AA2RUR9 1427 aa30.61■■■□□ 2.49
TSPAN3-206ENST00000559373 SPATA31A6Q5VVP1 1343 aa30.59■■■□□ 2.49
TSPAN3-206ENST00000559373 ADGRF5Q8IZF2 1346 aa30.59■■■□□ 2.49
TSPAN3-206ENST00000559373 PTCH1Q13635 1447 aa30.56■■■□□ 2.48
TSPAN3-206ENST00000559373 SPATA31E1Q6ZUB1 1445 aa30.54■■■□□ 2.48
TSPAN3-206ENST00000559373 C1orf167Q5SNV9 1468 aa30.53■■■□□ 2.48
TSPAN3-206ENST00000559373 STK26Q9P289 416 aa30.52■■■□□ 2.48
TSPAN3-206ENST00000559373 ORAI2Q96SN7 254 aa30.51■■■□□ 2.47
TSPAN3-206ENST00000559373 SETD5Q9C0A6 1442 aa30.5■■■□□ 2.47
TSPAN3-206ENST00000559373 TMEM132EQ6IEE7 984 aa30.48■■■□□ 2.47
TSPAN3-206ENST00000559373 LRRC59Q96AG4 307 aaKnown RBP30.47■■■□□ 2.47
TSPAN3-206ENST00000559373 WAPLQ7Z5K2 1190 aa30.45■■■□□ 2.47
TSPAN3-206ENST00000559373 RGPD8O14715 1765 aaPredicted RBP30.43■■■□□ 2.46
TSPAN3-206ENST00000559373 LAMC1P11047 1609 aa30.43■■■□□ 2.46
TSPAN3-206ENST00000559373 PNPLA6Q8IY17 1366 aa30.42■■■□□ 2.46
TSPAN3-206ENST00000559373 RAB3GAP2Q9H2M9 1393 aa30.42■■■□□ 2.46
TSPAN3-206ENST00000559373 KNDC1Q76NI1 1749 aa30.42■■■□□ 2.46
TSPAN3-206ENST00000559373 PRAG1Q86YV5 1406 aa30.42■■■□□ 2.46
TSPAN3-206ENST00000559373 NUTM2FA1L443 756 aa30.42■■■□□ 2.46
TSPAN3-206ENST00000559373 ZNF772Q68DY9 489 aaPredicted RBP30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms