RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 RPGRIP1LQ68CZ1 1315 aa21.58■■□□□ 1.05
SNRPA1-207ENST00000559309 NRXN1Q9ULB1 1477 aa21.58■■□□□ 1.04
SNRPA1-207ENST00000559309 MYOM2P54296 1465 aa21.57■■□□□ 1.04
SNRPA1-207ENST00000559309 MED14O60244 1454 aa21.56■■□□□ 1.04
SNRPA1-207ENST00000559309 STRCQ7RTU9 1775 aa21.56■■□□□ 1.04
SNRPA1-207ENST00000559309 RIMS2Q9UQ26 1411 aa21.55■■□□□ 1.04
SNRPA1-207ENST00000559309 POLR1AO95602 1720 aaPredicted RBP21.55■■□□□ 1.04
SNRPA1-207ENST00000559309 TIMELESSQ9UNS1 1208 aa21.54■■□□□ 1.04
SNRPA1-207ENST00000559309 STAC3Q96MF2 364 aa21.52■■□□□ 1.04
SNRPA1-207ENST00000559309 SCAF11Q99590 1463 aaKnown RBP21.52■■□□□ 1.03
SNRPA1-207ENST00000559309 NRXN3Q9Y4C0 1643 aa21.51■■□□□ 1.03
SNRPA1-207ENST00000559309 LTKP29376 864 aa21.51■■□□□ 1.03
SNRPA1-207ENST00000559309 SETBP1Q9Y6X0 1596 aa21.5■■□□□ 1.03
SNRPA1-207ENST00000559309 L3MBTL2Q969R5 705 aa21.5■■□□□ 1.03
SNRPA1-207ENST00000559309 STAG3Q9UJ98 1225 aa21.5■■□□□ 1.03
SNRPA1-207ENST00000559309 CHGAP10645 457 aaKnown RBP21.49■■□□□ 1.03
SNRPA1-207ENST00000559309 NEUROD1Q13562 356 aa21.48■■□□□ 1.03
SNRPA1-207ENST00000559309 SETD1AO15047 1707 aaKnown RBP21.48■■□□□ 1.03
SNRPA1-207ENST00000559309 PLEKHG1Q9ULL1 1385 aa21.48■■□□□ 1.03
SNRPA1-207ENST00000559309 PIK3C2GO75747 1445 aa21.47■■□□□ 1.03
SNRPA1-207ENST00000559309 RGL3Q3MIN7 710 aa21.47■■□□□ 1.03
SNRPA1-207ENST00000559309 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNRPA1-207ENST00000559309 VGFO15240 615 aaPredicted RBP21.44■■□□□ 1.02
SNRPA1-207ENST00000559309 HDGFP51858 240 aaKnown RBP21.44■■□□□ 1.02
SNRPA1-207ENST00000559309 ZNF326Q5BKZ1 582 aaKnown RBP21.44■■□□□ 1.02
SNRPA1-207ENST00000559309 ANKLE2Q86XL3 938 aa21.44■■□□□ 1.02
SNRPA1-207ENST00000559309 ADGRF5Q8IZF2 1346 aa21.44■■□□□ 1.02
SNRPA1-207ENST00000559309 TONSLQ96HA7 1378 aa21.44■■□□□ 1.02
SNRPA1-207ENST00000559309 PRAG1Q86YV5 1406 aa21.44■■□□□ 1.02
SNRPA1-207ENST00000559309 IQGAP1P46940 1657 aa21.44■■□□□ 1.02
SNRPA1-207ENST00000559309 TXNDC2Q86VQ3 553 aa21.43■■□□□ 1.02
SNRPA1-207ENST00000559309 ADAMTS13Q76LX8 1427 aa21.43■■□□□ 1.02
SNRPA1-207ENST00000559309 KIAA1210Q9ULL0 1709 aa21.43■■□□□ 1.02
SNRPA1-207ENST00000559309 DIP2AQ14689 1571 aa21.42■■□□□ 1.02
SNRPA1-207ENST00000559309 NPHP4O75161 1426 aaPredicted RBP21.41■■□□□ 1.02
SNRPA1-207ENST00000559309 DCAF11Q8TEB1 546 aa21.41■■□□□ 1.02
SNRPA1-207ENST00000559309 EID1Q9Y6B2 187 aa21.41■■□□□ 1.02
SNRPA1-207ENST00000559309 LAMC1P11047 1609 aa21.4■■□□□ 1.02
SNRPA1-207ENST00000559309 NCKAP5LQ9HCH0 1330 aa21.39■■□□□ 1.01
SNRPA1-207ENST00000559309 LTBP4Q8N2S1 1624 aa21.39■■□□□ 1.01
SNRPA1-207ENST00000559309 ALKQ9UM73 1620 aa21.39■■□□□ 1.01
SNRPA1-207ENST00000559309 TRPM1Q7Z4N2 1603 aa21.38■■□□□ 1.01
SNRPA1-207ENST00000559309 PPP1R15AO75807 674 aaPredicted RBP21.38■■□□□ 1.01
SNRPA1-207ENST00000559309 ASXL1Q8IXJ9 1541 aa21.37■■□□□ 1.01
SNRPA1-207ENST00000559309 IQSEC2Q5JU85 1478 aa21.37■■□□□ 1.01
SNRPA1-207ENST00000559309 ADGRB1O14514 1584 aa21.36■■□□□ 1.01
SNRPA1-207ENST00000559309 NUTM2DQ5VT03 806 aaPredicted RBP21.36■■□□□ 1.01
SNRPA1-207ENST00000559309 C14orf93Q9H972 538 aaKnown RBP21.35■■□□□ 1.01
SNRPA1-207ENST00000559309 NBPF8Q3BBV2 869 aa21.34■■□□□ 1.01
SNRPA1-207ENST00000559309 TBX22Q9Y458 520 aa21.34■■□□□ 1.01
SNRPA1-207ENST00000559309 KDM2AQ9Y2K7 1162 aa21.32■■□□□ 1
SNRPA1-207ENST00000559309 GPRASP1Q5JY77 1395 aa21.32■■□□□ 1
SNRPA1-207ENST00000559309 PIK3R4Q99570 1358 aa21.32■■□□□ 1
SNRPA1-207ENST00000559309 RALGAPBQ86X10 1494 aa21.32■■□□□ 1
SNRPA1-207ENST00000559309 CHD2O14647 1828 aaKnown RBP21.31■■□□□ 1
SNRPA1-207ENST00000559309 NWD1Q149M9 1564 aa21.31■■□□□ 1
SNRPA1-207ENST00000559309 XRN1Q8IZH2 1706 aaKnown RBP21.29■■□□□ 1
SNRPA1-207ENST00000559309 METP08581 1390 aa21.28■■□□□ 1
SNRPA1-207ENST00000559309 DISP3Q9P2K9 1392 aa21.28■■□□□ 1
SNRPA1-207ENST00000559309 CFAP70Q5T0N1 1121 aa21.27■■□□□ 1
SNRPA1-207ENST00000559309 PTPRUQ92729 1446 aa21.27■■□□□ 1
SNRPA1-207ENST00000559309 KNDC1Q76NI1 1749 aa21.26■□□□□ 0.99
SNRPA1-207ENST00000559309 TECPR2O15040 1411 aa21.26■□□□□ 0.99
SNRPA1-207ENST00000559309 STRCP1A6NGW2 1772 aa21.25■□□□□ 0.99
SNRPA1-207ENST00000559309 ILDR2Q71H61 639 aa21.25■□□□□ 0.99
SNRPA1-207ENST00000559309 SLC26A8Q96RN1 970 aa21.25■□□□□ 0.99
SNRPA1-207ENST00000559309 ZNF335Q9H4Z2 1342 aaPredicted RBP21.23■□□□□ 0.99
SNRPA1-207ENST00000559309 NBPF1Q3BBV0 1214 aa21.22■□□□□ 0.99
SNRPA1-207ENST00000559309 CPS1P31327 1500 aa21.22■□□□□ 0.99
SNRPA1-207ENST00000559309 DLC1Q96QB1 1528 aa21.21■□□□□ 0.99
SNRPA1-207ENST00000559309 LRPPRCP42704 1394 aaKnown RBP21.21■□□□□ 0.99
SNRPA1-207ENST00000559309 ABCC11Q96J66 1382 aa21.21■□□□□ 0.99
SNRPA1-207ENST00000559309 YTHDC2Q9H6S0 1430 aaKnown RBP21.21■□□□□ 0.99
SNRPA1-207ENST00000559309 SOCS7O14512 581 aa21.19■□□□□ 0.98
SNRPA1-207ENST00000559309 PTCH1Q13635 1447 aa21.19■□□□□ 0.98
SNRPA1-207ENST00000559309 NKTRP30414 1462 aaKnown RBP21.19■□□□□ 0.98
SNRPA1-207ENST00000559309 ARHGEF28Q8N1W1 1705 aaKnown RBP21.18■□□□□ 0.98
SNRPA1-207ENST00000559309 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
SNRPA1-207ENST00000559309 KCNA6P17658 529 aa21.17■□□□□ 0.98
SNRPA1-207ENST00000559309 TMEM132EQ6IEE7 984 aa21.17■□□□□ 0.98
SNRPA1-207ENST00000559309 SIRT1Q96EB6 747 aa21.16■□□□□ 0.98
SNRPA1-207ENST00000559309 ROCK2O75116 1388 aaKnown RBP21.15■□□□□ 0.98
SNRPA1-207ENST00000559309 FAM135BQ49AJ0 1406 aa21.14■□□□□ 0.98
SNRPA1-207ENST00000559309 UBAP1LF5GYI3 381 aa21.13■□□□□ 0.97
SNRPA1-207ENST00000559309 BCANQ96GW7 911 aa21.13■□□□□ 0.97
SNRPA1-207ENST00000559309 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
SNRPA1-207ENST00000559309 AMOTL2Q9Y2J4 779 aa21.12■□□□□ 0.97
SNRPA1-207ENST00000559309 XIRP1Q702N8 1843 aaKnown RBP21.12■□□□□ 0.97
SNRPA1-207ENST00000559309 ROBO2Q9HCK4 1378 aa21.11■□□□□ 0.97
SNRPA1-207ENST00000559309 NCOA3Q9Y6Q9 1424 aa21.09■□□□□ 0.97
SNRPA1-207ENST00000559309 LRRC7Q96NW7 1537 aa21.09■□□□□ 0.97
SNRPA1-207ENST00000559309 CARD11Q9BXL7 1154 aa21.07■□□□□ 0.96
SNRPA1-207ENST00000559309 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.07■□□□□ 0.96
SNRPA1-207ENST00000559309 SBNO2Q9Y2G9 1366 aa21.05■□□□□ 0.96
SNRPA1-207ENST00000559309 ADGRB2O60241 1585 aa21.05■□□□□ 0.96
SNRPA1-207ENST00000559309 PLEKHH1Q9ULM0 1364 aa21.04■□□□□ 0.96
SNRPA1-207ENST00000559309 NALCNQ8IZF0 1738 aa21.04■□□□□ 0.96
SNRPA1-207ENST00000559309 USP47Q96K76 1375 aa21.03■□□□□ 0.96
SNRPA1-207ENST00000559309 TRAK1Q9UPV9 953 aa21.03■□□□□ 0.96
SNRPA1-207ENST00000559309 QRICH2Q9H0J4 1663 aa21.02■□□□□ 0.96
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