RNA–Protein interactions for RNA: ENST00000559253.1

IPO4-208, Transcript of importin 4, humanhuman

TSL 4

Gene IPO4, Length 579 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-208ENST00000559253 CHGAP10645 457 aaKnown RBP24.4■■□□□ 1.5
IPO4-208ENST00000559253 SETD5Q9C0A6 1442 aa24.4■■□□□ 1.5
IPO4-208ENST00000559253 LRRC7Q96NW7 1537 aa24.4■■□□□ 1.5
IPO4-208ENST00000559253 MYO5BQ9ULV0 1848 aa24.4■■□□□ 1.5
IPO4-208ENST00000559253 PPP1R15AO75807 674 aaPredicted RBP24.39■■□□□ 1.49
IPO4-208ENST00000559253 UBAP1LF5GYI3 381 aa24.37■■□□□ 1.49
IPO4-208ENST00000559253 KCNA6P17658 529 aa24.37■■□□□ 1.49
IPO4-208ENST00000559253 STRCP1A6NGW2 1772 aa24.37■■□□□ 1.49
IPO4-208ENST00000559253 TBX22Q9Y458 520 aa24.36■■□□□ 1.49
IPO4-208ENST00000559253 DIP2AQ14689 1571 aa24.35■■□□□ 1.49
IPO4-208ENST00000559253 SLC26A8Q96RN1 970 aa24.35■■□□□ 1.49
IPO4-208ENST00000559253 CLTCL1P53675 1640 aa24.35■■□□□ 1.49
IPO4-208ENST00000559253 TOM1O60784 492 aa24.34■■□□□ 1.49
IPO4-208ENST00000559253 NKTRP30414 1462 aaKnown RBP24.33■■□□□ 1.49
IPO4-208ENST00000559253 PIK3R4Q99570 1358 aa24.33■■□□□ 1.49
IPO4-208ENST00000559253 MPHOSPH9Q99550 1183 aa24.33■■□□□ 1.49
IPO4-208ENST00000559253 NWD1Q149M9 1564 aa24.33■■□□□ 1.48
IPO4-208ENST00000559253 BCANQ96GW7 911 aa24.32■■□□□ 1.48
IPO4-208ENST00000559253 HRCP23327 699 aa24.31■■□□□ 1.48
IPO4-208ENST00000559253 ADAMTS13Q76LX8 1427 aa24.3■■□□□ 1.48
IPO4-208ENST00000559253 ZNF326Q5BKZ1 582 aaKnown RBP24.28■■□□□ 1.48
IPO4-208ENST00000559253 RPGRIP1LQ68CZ1 1315 aa24.28■■□□□ 1.48
IPO4-208ENST00000559253 RAB3GAP2Q9H2M9 1393 aa24.28■■□□□ 1.48
IPO4-208ENST00000559253 KIF1BO60333 1816 aa24.27■■□□□ 1.48
IPO4-208ENST00000559253 SETBP1Q9Y6X0 1596 aa24.27■■□□□ 1.48
IPO4-208ENST00000559253 NEXMIFQ5QGS0 1516 aa24.26■■□□□ 1.47
IPO4-208ENST00000559253 CCDC144AA2RUR9 1427 aa24.25■■□□□ 1.47
IPO4-208ENST00000559253 NCOA3Q9Y6Q9 1424 aa24.24■■□□□ 1.47
IPO4-208ENST00000559253 TMEM94Q12767 1356 aa24.23■■□□□ 1.47
IPO4-208ENST00000559253 CHD2O14647 1828 aaKnown RBP24.23■■□□□ 1.47
IPO4-208ENST00000559253 VGFO15240 615 aaPredicted RBP24.22■■□□□ 1.47
IPO4-208ENST00000559253 NUTM2DQ5VT03 806 aaPredicted RBP24.22■■□□□ 1.47
IPO4-208ENST00000559253 ALKQ9UM73 1620 aa24.21■■□□□ 1.47
IPO4-208ENST00000559253 PROSER2Q86WR7 435 aaPredicted RBP24.21■■□□□ 1.47
IPO4-208ENST00000559253 FOXD1Q16676 465 aa24.19■■□□□ 1.46
IPO4-208ENST00000559253 NRXN3Q9Y4C0 1643 aa24.19■■□□□ 1.46
IPO4-208ENST00000559253 XIRP1Q702N8 1843 aaKnown RBP24.19■■□□□ 1.46
IPO4-208ENST00000559253 SPATA31E1Q6ZUB1 1445 aa24.18■■□□□ 1.46
IPO4-208ENST00000559253 PIP4K2BP78356 416 aa24.14■■□□□ 1.45
IPO4-208ENST00000559253 MSH6P52701 1360 aa24.13■■□□□ 1.45
IPO4-208ENST00000559253 ANKRD30BQ9BXX2 1392 aa24.13■■□□□ 1.45
IPO4-208ENST00000559253 AMOTL2Q9Y2J4 779 aa24.12■■□□□ 1.45
IPO4-208ENST00000559253 PTPRUQ92729 1446 aa24.11■■□□□ 1.45
IPO4-208ENST00000559253 SENP3Q9H4L4 574 aaPredicted RBP24.11■■□□□ 1.45
IPO4-208ENST00000559253 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
IPO4-208ENST00000559253 FAM135BQ49AJ0 1406 aa24.1■■□□□ 1.45
IPO4-208ENST00000559253 PPLO60437 1756 aa24.1■■□□□ 1.45
IPO4-208ENST00000559253 XRN1Q8IZH2 1706 aaKnown RBP24.1■■□□□ 1.45
IPO4-208ENST00000559253 METP08581 1390 aa24.09■■□□□ 1.45
IPO4-208ENST00000559253 PRAG1Q86YV5 1406 aa24.09■■□□□ 1.45
IPO4-208ENST00000559253 HSPA1LP34931 641 aa24.06■■□□□ 1.44
IPO4-208ENST00000559253 C19orf44Q9H6X5 657 aa24.06■■□□□ 1.44
IPO4-208ENST00000559253 DCCP43146 1447 aa24.04■■□□□ 1.44
IPO4-208ENST00000559253 CADPS2Q86UW7 1296 aa24.03■■□□□ 1.44
IPO4-208ENST00000559253 RBM33Q96EV2 1170 aaKnown RBP24.03■■□□□ 1.44
IPO4-208ENST00000559253 PTCH1Q13635 1447 aa24.02■■□□□ 1.44
IPO4-208ENST00000559253 SETD1AO15047 1707 aaKnown RBP24.02■■□□□ 1.44
IPO4-208ENST00000559253 IFT172Q9UG01 1749 aa24.02■■□□□ 1.44
IPO4-208ENST00000559253 RGL3Q3MIN7 710 aa24.02■■□□□ 1.44
IPO4-208ENST00000559253 SLAIN2Q9P270 581 aa24.01■■□□□ 1.43
IPO4-208ENST00000559253 C14orf37Q86TY3 774 aa23.99■■□□□ 1.43
IPO4-208ENST00000559253 ADGRF5Q8IZF2 1346 aa23.99■■□□□ 1.43
IPO4-208ENST00000559253 PIK3C2GO75747 1445 aa23.99■■□□□ 1.43
IPO4-208ENST00000559253 MYOM2P54296 1465 aa23.99■■□□□ 1.43
IPO4-208ENST00000559253 STAC3Q96MF2 364 aa23.98■■□□□ 1.43
IPO4-208ENST00000559253 NRXN1Q9ULB1 1477 aa23.98■■□□□ 1.43
IPO4-208ENST00000559253 ATF3P18847 181 aa23.97■■□□□ 1.43
IPO4-208ENST00000559253 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.96■■□□□ 1.43
IPO4-208ENST00000559253 ADGRL3Q9HAR2 1447 aa23.95■■□□□ 1.42
IPO4-208ENST00000559253 TECPR2O15040 1411 aa23.93■■□□□ 1.42
IPO4-208ENST00000559253 ROBO1Q9Y6N7 1651 aa23.93■■□□□ 1.42
IPO4-208ENST00000559253 ROBO2Q9HCK4 1378 aa23.91■■□□□ 1.42
IPO4-208ENST00000559253 C14orf93Q9H972 538 aaKnown RBP23.9■■□□□ 1.42
IPO4-208ENST00000559253 LRPPRCP42704 1394 aaKnown RBP23.9■■□□□ 1.42
IPO4-208ENST00000559253 ABCC11Q96J66 1382 aa23.9■■□□□ 1.42
IPO4-208ENST00000559253 LAMC1P11047 1609 aa23.89■■□□□ 1.42
IPO4-208ENST00000559253 DISP3Q9P2K9 1392 aa23.88■■□□□ 1.41
IPO4-208ENST00000559253 SIRT1Q96EB6 747 aa23.86■■□□□ 1.41
IPO4-208ENST00000559253 MST1RQ04912 1400 aa23.85■■□□□ 1.41
IPO4-208ENST00000559253 ASXL1Q8IXJ9 1541 aa23.84■■□□□ 1.41
IPO4-208ENST00000559253 YTHDC2Q9H6S0 1430 aaKnown RBP23.84■■□□□ 1.41
IPO4-208ENST00000559253 KNDC1Q76NI1 1749 aa23.83■■□□□ 1.41
IPO4-208ENST00000559253 NALCNQ8IZF0 1738 aa23.83■■□□□ 1.41
IPO4-208ENST00000559253 AHDC1Q5TGY3 1603 aaPredicted RBP23.82■■□□□ 1.4
IPO4-208ENST00000559253 DHX57Q6P158 1386 aaKnown RBP23.81■■□□□ 1.4
IPO4-208ENST00000559253 BRINP3Q76B58 766 aa23.81■■□□□ 1.4
IPO4-208ENST00000559253 MED1Q15648 1581 aaPredicted RBP23.81■■□□□ 1.4
IPO4-208ENST00000559253 CFAP70Q5T0N1 1121 aa23.79■■□□□ 1.4
IPO4-208ENST00000559253 TMEM132EQ6IEE7 984 aa23.79■■□□□ 1.4
IPO4-208ENST00000559253 DCAF11Q8TEB1 546 aa23.79■■□□□ 1.4
IPO4-208ENST00000559253 CDC42BPGQ6DT37 1551 aa23.78■■□□□ 1.4
IPO4-208ENST00000559253 TRIM26Q12899 539 aaPredicted RBP23.77■■□□□ 1.4
IPO4-208ENST00000559253 JCADQ9P266 1359 aa23.77■■□□□ 1.4
IPO4-208ENST00000559253 PHLPP1O60346 1717 aa23.76■■□□□ 1.39
IPO4-208ENST00000559253 C1orf167Q5SNV9 1468 aa23.76■■□□□ 1.39
IPO4-208ENST00000559253 STK26Q9P289 416 aa23.76■■□□□ 1.39
IPO4-208ENST00000559253 COL16A1Q07092 1604 aaPredicted RBP23.76■■□□□ 1.39
IPO4-208ENST00000559253 ADGRB1O14514 1584 aa23.75■■□□□ 1.39
IPO4-208ENST00000559253 DLC1Q96QB1 1528 aa23.74■■□□□ 1.39
IPO4-208ENST00000559253 KDM2AQ9Y2K7 1162 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms