RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 CHD2O14647 1828 aaKnown RBP25.33■■□□□ 1.64
CDC42BPB-205ENST00000559245 GCC2Q8IWJ2 1684 aa25.32■■□□□ 1.64
CDC42BPB-205ENST00000559245 RBM33Q96EV2 1170 aaKnown RBP25.32■■□□□ 1.64
CDC42BPB-205ENST00000559245 RPRD2Q5VT52 1461 aaKnown RBP25.31■■□□□ 1.64
CDC42BPB-205ENST00000559245 BCANQ96GW7 911 aa25.29■■□□□ 1.64
CDC42BPB-205ENST00000559245 ANKRD50Q9ULJ7 1429 aa25.29■■□□□ 1.64
CDC42BPB-205ENST00000559245 FAM50AQ14320 339 aaKnown RBP25.27■■□□□ 1.64
CDC42BPB-205ENST00000559245 ZFYVE9O95405 1425 aa25.26■■□□□ 1.63
CDC42BPB-205ENST00000559245 TMEM131LA2VDJ0 1609 aa25.26■■□□□ 1.63
CDC42BPB-205ENST00000559245 MSH6P52701 1360 aa25.25■■□□□ 1.63
CDC42BPB-205ENST00000559245 PHLPP1O60346 1717 aa25.25■■□□□ 1.63
CDC42BPB-205ENST00000559245 PLEKHG1Q9ULL1 1385 aa25.23■■□□□ 1.63
CDC42BPB-205ENST00000559245 UNC13BO14795 1591 aa25.22■■□□□ 1.63
CDC42BPB-205ENST00000559245 RIMS2Q9UQ26 1411 aa25.22■■□□□ 1.63
CDC42BPB-205ENST00000559245 E9PCH4 1651 aa25.2■■□□□ 1.63
CDC42BPB-205ENST00000559245 PPP1R15AO75807 674 aaPredicted RBP25.2■■□□□ 1.62
CDC42BPB-205ENST00000559245 POTEAQ6S8J7 498 aa25.2■■□□□ 1.62
CDC42BPB-205ENST00000559245 HDGFP51858 240 aaKnown RBP25.19■■□□□ 1.62
CDC42BPB-205ENST00000559245 SLAIN2Q9P270 581 aa25.19■■□□□ 1.62
CDC42BPB-205ENST00000559245 TBX22Q9Y458 520 aa25.14■■□□□ 1.62
CDC42BPB-205ENST00000559245 COL16A1Q07092 1604 aaPredicted RBP25.13■■□□□ 1.61
CDC42BPB-205ENST00000559245 IQGAP3Q86VI3 1631 aa25.13■■□□□ 1.61
CDC42BPB-205ENST00000559245 CHGAP10645 457 aaKnown RBP25.13■■□□□ 1.61
CDC42BPB-205ENST00000559245 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.12■■□□□ 1.61
CDC42BPB-205ENST00000559245 JCADQ9P266 1359 aa25.12■■□□□ 1.61
CDC42BPB-205ENST00000559245 DIP2AQ14689 1571 aa25.12■■□□□ 1.61
CDC42BPB-205ENST00000559245 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.12■■□□□ 1.61
CDC42BPB-205ENST00000559245 NCOA3Q9Y6Q9 1424 aa25.11■■□□□ 1.61
CDC42BPB-205ENST00000559245 SETD1AO15047 1707 aaKnown RBP25.1■■□□□ 1.61
CDC42BPB-205ENST00000559245 ADAMTS13Q76LX8 1427 aa25.1■■□□□ 1.61
CDC42BPB-205ENST00000559245 NUTM2DQ5VT03 806 aaPredicted RBP25.09■■□□□ 1.61
CDC42BPB-205ENST00000559245 C14orf37Q86TY3 774 aa25.07■■□□□ 1.6
CDC42BPB-205ENST00000559245 ROCK1Q13464 1354 aa25.06■■□□□ 1.6
CDC42BPB-205ENST00000559245 PIK3R4Q99570 1358 aa25.05■■□□□ 1.6
CDC42BPB-205ENST00000559245 TRPM2O94759 1503 aa25.03■■□□□ 1.6
CDC42BPB-205ENST00000559245 AHDC1Q5TGY3 1603 aaPredicted RBP25.03■■□□□ 1.6
CDC42BPB-205ENST00000559245 SHPRHQ149N8 1683 aa25.03■■□□□ 1.6
CDC42BPB-205ENST00000559245 CADPS2Q86UW7 1296 aa25.02■■□□□ 1.6
CDC42BPB-205ENST00000559245 C19orf44Q9H6X5 657 aa25.02■■□□□ 1.6
CDC42BPB-205ENST00000559245 NUP155O75694 1391 aa25.01■■□□□ 1.59
CDC42BPB-205ENST00000559245 LRP6O75581 1613 aa25.01■■□□□ 1.59
CDC42BPB-205ENST00000559245 ATF3P18847 181 aa25■■□□□ 1.59
CDC42BPB-205ENST00000559245 SPHKAPQ2M3C7 1700 aa24.99■■□□□ 1.59
CDC42BPB-205ENST00000559245 SPATA31A6Q5VVP1 1343 aa24.99■■□□□ 1.59
CDC42BPB-205ENST00000559245 PTPRUQ92729 1446 aa24.98■■□□□ 1.59
CDC42BPB-205ENST00000559245 NRXN3Q9Y4C0 1643 aa24.97■■□□□ 1.59
CDC42BPB-205ENST00000559245 AMOTL2Q9Y2J4 779 aa24.97■■□□□ 1.59
CDC42BPB-205ENST00000559245 XRN1Q8IZH2 1706 aaKnown RBP24.95■■□□□ 1.59
CDC42BPB-205ENST00000559245 MEX3CQ5U5Q3 659 aaKnown RBP24.95■■□□□ 1.58
CDC42BPB-205ENST00000559245 ITGAEP38570 1179 aa24.94■■□□□ 1.58
CDC42BPB-205ENST00000559245 SETBP1Q9Y6X0 1596 aa24.93■■□□□ 1.58
CDC42BPB-205ENST00000559245 ZNF772Q68DY9 489 aaPredicted RBP24.91■■□□□ 1.58
CDC42BPB-205ENST00000559245 BRINP3Q76B58 766 aa24.91■■□□□ 1.58
CDC42BPB-205ENST00000559245 DCCP43146 1447 aa24.91■■□□□ 1.58
CDC42BPB-205ENST00000559245 NHSL1Q5SYE7 1610 aa24.89■■□□□ 1.57
CDC42BPB-205ENST00000559245 ASXL1Q8IXJ9 1541 aa24.87■■□□□ 1.57
CDC42BPB-205ENST00000559245 ZNF326Q5BKZ1 582 aaKnown RBP24.86■■□□□ 1.57
CDC42BPB-205ENST00000559245 KIF1BO60333 1816 aa24.85■■□□□ 1.57
CDC42BPB-205ENST00000559245 MST1RQ04912 1400 aa24.85■■□□□ 1.57
CDC42BPB-205ENST00000559245 TRIM52Q96A61 297 aa24.84■■□□□ 1.57
CDC42BPB-205ENST00000559245 CLTCL1P53675 1640 aa24.83■■□□□ 1.57
CDC42BPB-205ENST00000559245 METP08581 1390 aa24.83■■□□□ 1.57
CDC42BPB-205ENST00000559245 NUTM2BA6NNL0 878 aaPredicted RBP24.83■■□□□ 1.57
CDC42BPB-205ENST00000559245 NUTM2EB1AL46 878 aaPredicted RBP24.83■■□□□ 1.57
CDC42BPB-205ENST00000559245 NUTM2AQ8IVF1 878 aaPredicted RBP24.83■■□□□ 1.57
CDC42BPB-205ENST00000559245 NALCNQ8IZF0 1738 aa24.83■■□□□ 1.57
CDC42BPB-205ENST00000559245 NEXMIFQ5QGS0 1516 aa24.81■■□□□ 1.56
CDC42BPB-205ENST00000559245 SETD5Q9C0A6 1442 aa24.81■■□□□ 1.56
CDC42BPB-205ENST00000559245 PPARGC1BQ86YN6 1023 aaKnown RBP24.8■■□□□ 1.56
CDC42BPB-205ENST00000559245 UPF1Q92900 1129 aaKnown RBP eCLIP24.79■■□□□ 1.56
CDC42BPB-205ENST00000559245 ADGRL3Q9HAR2 1447 aa24.78■■□□□ 1.56
CDC42BPB-205ENST00000559245 RXRBP28702 533 aa24.78■■□□□ 1.56
CDC42BPB-205ENST00000559245 LRRC59Q96AG4 307 aaKnown RBP24.75■■□□□ 1.55
CDC42BPB-205ENST00000559245 AFF2P51816 1311 aa24.75■■□□□ 1.55
CDC42BPB-205ENST00000559245 CDK12Q9NYV4 1490 aaPredicted RBP24.75■■□□□ 1.55
CDC42BPB-205ENST00000559245 DDX17Q92841 729 aaKnown RBP24.73■■□□□ 1.55
CDC42BPB-205ENST00000559245 PNPLA6Q8IY17 1366 aa24.7■■□□□ 1.55
CDC42BPB-205ENST00000559245 LAMC1P11047 1609 aa24.69■■□□□ 1.54
CDC42BPB-205ENST00000559245 C8orf37Q96NL8 207 aa24.68■■□□□ 1.54
CDC42BPB-205ENST00000559245 NAIPQ13075 1403 aa24.68■■□□□ 1.54
CDC42BPB-205ENST00000559245 C1orf167Q5SNV9 1468 aa24.67■■□□□ 1.54
CDC42BPB-205ENST00000559245 PTCH1Q13635 1447 aa24.66■■□□□ 1.54
CDC42BPB-205ENST00000559245 PPLO60437 1756 aa24.65■■□□□ 1.54
CDC42BPB-205ENST00000559245 RRBP1Q9P2E9 1410 aaKnown RBP24.64■■□□□ 1.54
CDC42BPB-205ENST00000559245 QTRT2Q9H974 415 aaKnown RBP24.64■■□□□ 1.54
CDC42BPB-205ENST00000559245 RGS12O14924 1447 aa24.63■■□□□ 1.53
CDC42BPB-205ENST00000559245 VGFO15240 615 aaPredicted RBP24.63■■□□□ 1.53
CDC42BPB-205ENST00000559245 ROBO2Q9HCK4 1378 aa24.63■■□□□ 1.53
CDC42BPB-205ENST00000559245 RBM6P78332 1123 aaKnown RBP24.62■■□□□ 1.53
CDC42BPB-205ENST00000559245 ORAI2Q96SN7 254 aa24.6■■□□□ 1.53
CDC42BPB-205ENST00000559245 PRAG1Q86YV5 1406 aa24.6■■□□□ 1.53
CDC42BPB-205ENST00000559245 ADAMTS2O95450 1211 aa24.59■■□□□ 1.53
CDC42BPB-205ENST00000559245 NGLY1Q96IV0 654 aa24.59■■□□□ 1.53
CDC42BPB-205ENST00000559245 SOS2Q07890 1332 aaPredicted RBP24.59■■□□□ 1.53
CDC42BPB-205ENST00000559245 RPGRIP1LQ68CZ1 1315 aa24.58■■□□□ 1.52
CDC42BPB-205ENST00000559245 HFM1A2PYH4 1435 aa24.55■■□□□ 1.52
CDC42BPB-205ENST00000559245 COL22A1Q8NFW1 1626 aaPredicted RBP24.55■■□□□ 1.52
CDC42BPB-205ENST00000559245 SLC4A1APQ9BWU0 796 aaKnown RBP24.53■■□□□ 1.52
CDC42BPB-205ENST00000559245 MARF1Q9Y4F3 1742 aaKnown RBP24.52■■□□□ 1.52
CDC42BPB-205ENST00000559245 CDC42BPGQ6DT37 1551 aa24.51■■□□□ 1.51
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