RNA–Protein interactions for RNA: ENST00000559162.5

AP3S2-209, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 357 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-209ENST00000559162 PIP4K2BP78356 416 aa15.84■□□□□ 0.13
AP3S2-209ENST00000559162 PLEKHG1Q9ULL1 1385 aa15.84■□□□□ 0.13
AP3S2-209ENST00000559162 RIMS2Q9UQ26 1411 aa15.84■□□□□ 0.13
AP3S2-209ENST00000559162 PPP1R15AO75807 674 aaPredicted RBP15.82■□□□□ 0.12
AP3S2-209ENST00000559162 SPHKAPQ2M3C7 1700 aa15.82■□□□□ 0.12
AP3S2-209ENST00000559162 XIRP1Q702N8 1843 aaKnown RBP15.82■□□□□ 0.12
AP3S2-209ENST00000559162 KCNA6P17658 529 aa15.81■□□□□ 0.12
AP3S2-209ENST00000559162 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.81■□□□□ 0.12
AP3S2-209ENST00000559162 DIP2AQ14689 1571 aa15.8■□□□□ 0.12
AP3S2-209ENST00000559162 NAIPQ13075 1403 aa15.8■□□□□ 0.12
AP3S2-209ENST00000559162 HSPA1LP34931 641 aa15.8■□□□□ 0.12
AP3S2-209ENST00000559162 SLC26A8Q96RN1 970 aa15.8■□□□□ 0.12
AP3S2-209ENST00000559162 HFM1A2PYH4 1435 aa15.79■□□□□ 0.12
AP3S2-209ENST00000559162 BCANQ96GW7 911 aa15.79■□□□□ 0.12
AP3S2-209ENST00000559162 TMEM94Q12767 1356 aa15.78■□□□□ 0.12
AP3S2-209ENST00000559162 CHGAP10645 457 aaKnown RBP15.78■□□□□ 0.12
AP3S2-209ENST00000559162 TRPM2O94759 1503 aa15.77■□□□□ 0.11
AP3S2-209ENST00000559162 CHD2O14647 1828 aaKnown RBP15.75■□□□□ 0.11
AP3S2-209ENST00000559162 PIK3R4Q99570 1358 aa15.75■□□□□ 0.11
AP3S2-209ENST00000559162 TBX22Q9Y458 520 aa15.74■□□□□ 0.11
AP3S2-209ENST00000559162 ADAMTS13Q76LX8 1427 aa15.74■□□□□ 0.11
AP3S2-209ENST00000559162 MED1Q15648 1581 aaPredicted RBP15.74■□□□□ 0.11
AP3S2-209ENST00000559162 PROSER2Q86WR7 435 aaPredicted RBP15.73■□□□□ 0.11
AP3S2-209ENST00000559162 FAM135BQ49AJ0 1406 aa15.72■□□□□ 0.11
AP3S2-209ENST00000559162 MSH6P52701 1360 aa15.72■□□□□ 0.11
AP3S2-209ENST00000559162 CLTCL1P53675 1640 aa15.72■□□□□ 0.11
AP3S2-209ENST00000559162 SETBP1Q9Y6X0 1596 aa15.71■□□□□ 0.11
AP3S2-209ENST00000559162 NCOA3Q9Y6Q9 1424 aa15.71■□□□□ 0.11
AP3S2-209ENST00000559162 KIF1BO60333 1816 aa15.69■□□□□ 0.1
AP3S2-209ENST00000559162 NRXN3Q9Y4C0 1643 aa15.68■□□□□ 0.1
AP3S2-209ENST00000559162 ROBO1Q9Y6N7 1651 aa15.68■□□□□ 0.1
AP3S2-209ENST00000559162 NUTM2DQ5VT03 806 aaPredicted RBP15.68■□□□□ 0.1
AP3S2-209ENST00000559162 ILDR2Q71H61 639 aa15.68■□□□□ 0.1
AP3S2-209ENST00000559162 NEXMIFQ5QGS0 1516 aa15.68■□□□□ 0.1
AP3S2-209ENST00000559162 ZNF326Q5BKZ1 582 aaKnown RBP15.67■□□□□ 0.1
AP3S2-209ENST00000559162 TRIM52Q96A61 297 aa15.67■□□□□ 0.1
AP3S2-209ENST00000559162 SENP3Q9H4L4 574 aaPredicted RBP15.67■□□□□ 0.1
AP3S2-209ENST00000559162 XRN1Q8IZH2 1706 aaKnown RBP15.65■□□□□ 0.1
AP3S2-209ENST00000559162 SOCS7O14512 581 aa15.64■□□□□ 0.09
AP3S2-209ENST00000559162 RBM33Q96EV2 1170 aaKnown RBP15.64■□□□□ 0.09
AP3S2-209ENST00000559162 SLC4A1APQ9BWU0 796 aaKnown RBP15.64■□□□□ 0.09
AP3S2-209ENST00000559162 C14orf37Q86TY3 774 aa15.62■□□□□ 0.09
AP3S2-209ENST00000559162 PHF23Q9BUL5 403 aaPredicted RBP15.62■□□□□ 0.09
AP3S2-209ENST00000559162 ACIN1Q9UKV3 1341 aaKnown RBP15.62■□□□□ 0.09
AP3S2-209ENST00000559162 DCCP43146 1447 aa15.61■□□□□ 0.09
AP3S2-209ENST00000559162 PTPRUQ92729 1446 aa15.61■□□□□ 0.09
AP3S2-209ENST00000559162 SLAIN2Q9P270 581 aa15.61■□□□□ 0.09
AP3S2-209ENST00000559162 AMOTL2Q9Y2J4 779 aa15.61■□□□□ 0.09
AP3S2-209ENST00000559162 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.6■□□□□ 0.09
AP3S2-209ENST00000559162 CADPS2Q86UW7 1296 aa15.6■□□□□ 0.09
AP3S2-209ENST00000559162 C19orf44Q9H6X5 657 aa15.6■□□□□ 0.09
AP3S2-209ENST00000559162 RPGRIP1LQ68CZ1 1315 aa15.59■□□□□ 0.09
AP3S2-209ENST00000559162 PHLPP1O60346 1717 aa15.58■□□□□ 0.08
AP3S2-209ENST00000559162 CCDC144AA2RUR9 1427 aa15.58■□□□□ 0.08
AP3S2-209ENST00000559162 PPLO60437 1756 aa15.57■□□□□ 0.08
AP3S2-209ENST00000559162 VGFO15240 615 aaPredicted RBP15.57■□□□□ 0.08
AP3S2-209ENST00000559162 ATF3P18847 181 aa15.57■□□□□ 0.08
AP3S2-209ENST00000559162 METP08581 1390 aa15.57■□□□□ 0.08
AP3S2-209ENST00000559162 SETD1AO15047 1707 aaKnown RBP15.56■□□□□ 0.08
AP3S2-209ENST00000559162 COL16A1Q07092 1604 aaPredicted RBP15.55■□□□□ 0.08
AP3S2-209ENST00000559162 AHDC1Q5TGY3 1603 aaPredicted RBP15.55■□□□□ 0.08
AP3S2-209ENST00000559162 PTCH1Q13635 1447 aa15.55■□□□□ 0.08
AP3S2-209ENST00000559162 PRAG1Q86YV5 1406 aa15.55■□□□□ 0.08
AP3S2-209ENST00000559162 ADGRL3Q9HAR2 1447 aa15.54■□□□□ 0.08
AP3S2-209ENST00000559162 JCADQ9P266 1359 aa15.53■□□□□ 0.08
AP3S2-209ENST00000559162 MPHOSPH9Q99550 1183 aa15.53■□□□□ 0.08
AP3S2-209ENST00000559162 SETD5Q9C0A6 1442 aa15.52■□□□□ 0.08
AP3S2-209ENST00000559162 SPATA31E1Q6ZUB1 1445 aa15.51■□□□□ 0.07
AP3S2-209ENST00000559162 NALCNQ8IZF0 1738 aa15.51■□□□□ 0.07
AP3S2-209ENST00000559162 IFT172Q9UG01 1749 aa15.51■□□□□ 0.07
AP3S2-209ENST00000559162 MST1RQ04912 1400 aa15.51■□□□□ 0.07
AP3S2-209ENST00000559162 ANKRD30BQ9BXX2 1392 aa15.5■□□□□ 0.07
AP3S2-209ENST00000559162 ASXL1Q8IXJ9 1541 aa15.5■□□□□ 0.07
AP3S2-209ENST00000559162 FOXD1Q16676 465 aa15.5■□□□□ 0.07
AP3S2-209ENST00000559162 SHPRHQ149N8 1683 aa15.48■□□□□ 0.07
AP3S2-209ENST00000559162 SPATA31A6Q5VVP1 1343 aa15.47■□□□□ 0.07
AP3S2-209ENST00000559162 NHSL1Q5SYE7 1610 aa15.47■□□□□ 0.07
AP3S2-209ENST00000559162 BRINP3Q76B58 766 aa15.47■□□□□ 0.07
AP3S2-209ENST00000559162 RAB3GAP2Q9H2M9 1393 aa15.46■□□□□ 0.07
AP3S2-209ENST00000559162 ROBO2Q9HCK4 1378 aa15.46■□□□□ 0.07
AP3S2-209ENST00000559162 PIK3C2GO75747 1445 aa15.44■□□□□ 0.06
AP3S2-209ENST00000559162 CDC42BPGQ6DT37 1551 aa15.44■□□□□ 0.06
AP3S2-209ENST00000559162 TECPR2O15040 1411 aa15.43■□□□□ 0.06
AP3S2-209ENST00000559162 KNDC1Q76NI1 1749 aa15.43■□□□□ 0.06
AP3S2-209ENST00000559162 RGS17Q9UGC6 210 aaPredicted RBP15.43■□□□□ 0.06
AP3S2-209ENST00000559162 MYOM2P54296 1465 aa15.43■□□□□ 0.06
AP3S2-209ENST00000559162 LAMC1P11047 1609 aa15.43■□□□□ 0.06
AP3S2-209ENST00000559162 ADGRF5Q8IZF2 1346 aa15.43■□□□□ 0.06
AP3S2-209ENST00000559162 C1orf167Q5SNV9 1468 aa15.42■□□□□ 0.06
AP3S2-209ENST00000559162 RGL3Q3MIN7 710 aa15.42■□□□□ 0.06
AP3S2-209ENST00000559162 LRP6O75581 1613 aa15.41■□□□□ 0.06
AP3S2-209ENST00000559162 NRXN1Q9ULB1 1477 aa15.4■□□□□ 0.06
AP3S2-209ENST00000559162 LRPPRCP42704 1394 aaKnown RBP15.4■□□□□ 0.06
AP3S2-209ENST00000559162 ABCC11Q96J66 1382 aa15.38■□□□□ 0.05
AP3S2-209ENST00000559162 MEX3CQ5U5Q3 659 aaKnown RBP15.38■□□□□ 0.05
AP3S2-209ENST00000559162 HRCP23327 699 aa15.37■□□□□ 0.05
AP3S2-209ENST00000559162 LRRC59Q96AG4 307 aaKnown RBP15.37■□□□□ 0.05
AP3S2-209ENST00000559162 YTHDC2Q9H6S0 1430 aaKnown RBP15.36■□□□□ 0.05
AP3S2-209ENST00000559162 POTEAQ6S8J7 498 aa15.35■□□□□ 0.05
AP3S2-209ENST00000559162 ZNF772Q68DY9 489 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms