RNA–Protein interactions for RNA: ENST00000558977.1

RNF111-203, Transcript of ring finger protein 111, humanhuman

TSL 2

Gene RNF111, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-203ENST00000558977 RNF39Q9H2S5 420 aa10.86□□□□□ -0.67
RNF111-203ENST00000558977 HFM1A2PYH4 1435 aa10.84□□□□□ -0.67
RNF111-203ENST00000558977 ALKQ9UM73 1620 aa10.84□□□□□ -0.67
RNF111-203ENST00000558977 ZFYVE9O95405 1425 aa10.84□□□□□ -0.67
RNF111-203ENST00000558977 TMEM2Q9UHN6 1383 aa10.83□□□□□ -0.68
RNF111-203ENST00000558977 ANKLE2Q86XL3 938 aa10.83□□□□□ -0.68
RNF111-203ENST00000558977 CLTCL1P53675 1640 aa10.83□□□□□ -0.68
RNF111-203ENST00000558977 NWD1Q149M9 1564 aa10.82□□□□□ -0.68
RNF111-203ENST00000558977 LTKP29376 864 aa10.82□□□□□ -0.68
RNF111-203ENST00000558977 ITGAEP38570 1179 aa10.82□□□□□ -0.68
RNF111-203ENST00000558977 IDI1Q13907 227 aa10.82□□□□□ -0.68
RNF111-203ENST00000558977 NUP155O75694 1391 aa10.81□□□□□ -0.68
RNF111-203ENST00000558977 TRPM2O94759 1503 aa10.81□□□□□ -0.68
RNF111-203ENST00000558977 CHD2O14647 1828 aaKnown RBP10.81□□□□□ -0.68
RNF111-203ENST00000558977 KIF1BO60333 1816 aa10.8□□□□□ -0.68
RNF111-203ENST00000558977 CACNB1Q02641 598 aaPredicted RBP10.8□□□□□ -0.68
RNF111-203ENST00000558977 SLC52A1Q9NWF4 448 aa10.8□□□□□ -0.68
RNF111-203ENST00000558977 NRXN3Q9Y4C0 1643 aa10.8□□□□□ -0.68
RNF111-203ENST00000558977 LRRC7Q96NW7 1537 aa10.79□□□□□ -0.68
RNF111-203ENST00000558977 C1QBPQ07021 282 aaKnown RBP10.79□□□□□ -0.68
RNF111-203ENST00000558977 SLC4A1APQ9BWU0 796 aaKnown RBP10.79□□□□□ -0.68
RNF111-203ENST00000558977 DIP2AQ14689 1571 aa10.77□□□□□ -0.68
RNF111-203ENST00000558977 SETD1AO15047 1707 aaKnown RBP10.76□□□□□ -0.69
RNF111-203ENST00000558977 NEXMIFQ5QGS0 1516 aa10.76□□□□□ -0.69
RNF111-203ENST00000558977 TXNDC2Q86VQ3 553 aa10.76□□□□□ -0.69
RNF111-203ENST00000558977 RIMS2Q9UQ26 1411 aa10.75□□□□□ -0.69
RNF111-203ENST00000558977 PPLO60437 1756 aa10.75□□□□□ -0.69
RNF111-203ENST00000558977 PLEKHG1Q9ULL1 1385 aa10.75□□□□□ -0.69
RNF111-203ENST00000558977 IFT172Q9UG01 1749 aa10.75□□□□□ -0.69
RNF111-203ENST00000558977 SETBP1Q9Y6X0 1596 aa10.74□□□□□ -0.69
RNF111-203ENST00000558977 ADAMTS13Q76LX8 1427 aa10.74□□□□□ -0.69
RNF111-203ENST00000558977 NKTRP30414 1462 aaKnown RBP10.74□□□□□ -0.69
RNF111-203ENST00000558977 XRN1Q8IZH2 1706 aaKnown RBP10.73□□□□□ -0.69
RNF111-203ENST00000558977 EID1Q9Y6B2 187 aa10.73□□□□□ -0.69
RNF111-203ENST00000558977 STAG3Q9UJ98 1225 aa10.72□□□□□ -0.69
RNF111-203ENST00000558977 SETD5Q9C0A6 1442 aa10.67□□□□□ -0.7
RNF111-203ENST00000558977 UBAP1LF5GYI3 381 aa10.67□□□□□ -0.7
RNF111-203ENST00000558977 SLC4A2P04920 1241 aa10.67□□□□□ -0.7
RNF111-203ENST00000558977 SLC26A8Q96RN1 970 aa10.67□□□□□ -0.7
RNF111-203ENST00000558977 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.67□□□□□ -0.7
RNF111-203ENST00000558977 PTPRUQ92729 1446 aa10.67□□□□□ -0.7
RNF111-203ENST00000558977 ROBO1Q9Y6N7 1651 aa10.66□□□□□ -0.7
RNF111-203ENST00000558977 KCNA6P17658 529 aa10.66□□□□□ -0.7
RNF111-203ENST00000558977 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.66□□□□□ -0.7
RNF111-203ENST00000558977 TMEM94Q12767 1356 aa10.65□□□□□ -0.7
RNF111-203ENST00000558977 PIK3R4Q99570 1358 aa10.65□□□□□ -0.7
RNF111-203ENST00000558977 NALCNQ8IZF0 1738 aa10.65□□□□□ -0.7
RNF111-203ENST00000558977 CHGAP10645 457 aaKnown RBP10.64□□□□□ -0.71
RNF111-203ENST00000558977 NUTM2DQ5VT03 806 aaPredicted RBP10.64□□□□□ -0.71
RNF111-203ENST00000558977 TBX22Q9Y458 520 aa10.64□□□□□ -0.71
RNF111-203ENST00000558977 SPATA31E1Q6ZUB1 1445 aa10.64□□□□□ -0.71
RNF111-203ENST00000558977 RAB3GAP2Q9H2M9 1393 aa10.64□□□□□ -0.71
RNF111-203ENST00000558977 TOM1O60784 492 aa10.63□□□□□ -0.71
RNF111-203ENST00000558977 PPP1R15AO75807 674 aaPredicted RBP10.63□□□□□ -0.71
RNF111-203ENST00000558977 HDGFP51858 240 aaKnown RBP10.63□□□□□ -0.71
RNF111-203ENST00000558977 TRIM52Q96A61 297 aa10.63□□□□□ -0.71
RNF111-203ENST00000558977 U3KPZ7 1027 aaPredicted RBP10.63□□□□□ -0.71
RNF111-203ENST00000558977 PRAG1Q86YV5 1406 aa10.63□□□□□ -0.71
RNF111-203ENST00000558977 NCOA3Q9Y6Q9 1424 aa10.63□□□□□ -0.71
RNF111-203ENST00000558977 KNDC1Q76NI1 1749 aa10.62□□□□□ -0.71
RNF111-203ENST00000558977 MED1Q15648 1581 aaPredicted RBP10.61□□□□□ -0.71
RNF111-203ENST00000558977 CCDC144AA2RUR9 1427 aa10.61□□□□□ -0.71
RNF111-203ENST00000558977 ASXL1Q8IXJ9 1541 aa10.61□□□□□ -0.71
RNF111-203ENST00000558977 PIP4K2BP78356 416 aa10.6□□□□□ -0.71
RNF111-203ENST00000558977 MPHOSPH9Q99550 1183 aa10.6□□□□□ -0.71
RNF111-203ENST00000558977 PHLPP1O60346 1717 aa10.6□□□□□ -0.71
RNF111-203ENST00000558977 METP08581 1390 aa10.6□□□□□ -0.71
RNF111-203ENST00000558977 ACIN1Q9UKV3 1341 aaKnown RBP10.59□□□□□ -0.71
RNF111-203ENST00000558977 FAM135BQ49AJ0 1406 aa10.59□□□□□ -0.71
RNF111-203ENST00000558977 HSPA1LP34931 641 aa10.59□□□□□ -0.71
RNF111-203ENST00000558977 DCCP43146 1447 aa10.58□□□□□ -0.72
RNF111-203ENST00000558977 PTCH1Q13635 1447 aa10.58□□□□□ -0.72
RNF111-203ENST00000558977 LAMC1P11047 1609 aa10.58□□□□□ -0.72
RNF111-203ENST00000558977 COL16A1Q07092 1604 aaPredicted RBP10.58□□□□□ -0.72
RNF111-203ENST00000558977 NHSL1Q5SYE7 1610 aa10.58□□□□□ -0.72
RNF111-203ENST00000558977 NRXN1Q9ULB1 1477 aa10.58□□□□□ -0.72
RNF111-203ENST00000558977 ZNF326Q5BKZ1 582 aaKnown RBP10.58□□□□□ -0.72
RNF111-203ENST00000558977 PROSER2Q86WR7 435 aaPredicted RBP10.58□□□□□ -0.72
RNF111-203ENST00000558977 RBM33Q96EV2 1170 aaKnown RBP10.58□□□□□ -0.72
RNF111-203ENST00000558977 AHDC1Q5TGY3 1603 aaPredicted RBP10.58□□□□□ -0.72
RNF111-203ENST00000558977 RPGRIP1LQ68CZ1 1315 aa10.58□□□□□ -0.72
RNF111-203ENST00000558977 MYOM2P54296 1465 aa10.57□□□□□ -0.72
RNF111-203ENST00000558977 MSH6P52701 1360 aa10.57□□□□□ -0.72
RNF111-203ENST00000558977 BCANQ96GW7 911 aa10.57□□□□□ -0.72
RNF111-203ENST00000558977 PIK3C2GO75747 1445 aa10.57□□□□□ -0.72
RNF111-203ENST00000558977 ANKRD30BQ9BXX2 1392 aa10.55□□□□□ -0.72
RNF111-203ENST00000558977 SHPRHQ149N8 1683 aa10.55□□□□□ -0.72
RNF111-203ENST00000558977 HRCP23327 699 aa10.55□□□□□ -0.72
RNF111-203ENST00000558977 AMOTL2Q9Y2J4 779 aa10.55□□□□□ -0.72
RNF111-203ENST00000558977 ADGRL3Q9HAR2 1447 aa10.55□□□□□ -0.72
RNF111-203ENST00000558977 TECPR2O15040 1411 aa10.54□□□□□ -0.72
RNF111-203ENST00000558977 VGFO15240 615 aaPredicted RBP10.54□□□□□ -0.72
RNF111-203ENST00000558977 CDC42BPGQ6DT37 1551 aa10.53□□□□□ -0.72
RNF111-203ENST00000558977 MST1RQ04912 1400 aa10.53□□□□□ -0.72
RNF111-203ENST00000558977 ADGRF5Q8IZF2 1346 aa10.53□□□□□ -0.72
RNF111-203ENST00000558977 DISP3Q9P2K9 1392 aa10.52□□□□□ -0.72
RNF111-203ENST00000558977 FOXD4L1Q9NU39 408 aa10.52□□□□□ -0.73
RNF111-203ENST00000558977 ROBO2Q9HCK4 1378 aa10.52□□□□□ -0.73
RNF111-203ENST00000558977 MYCNP04198 464 aaPredicted RBP10.51□□□□□ -0.73
RNF111-203ENST00000558977 C19orf44Q9H6X5 657 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms