RNA–Protein interactions for RNA: ENST00000558968.1

CTDSPL2-205, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-205ENST00000558968 MED1Q15648 1581 aaPredicted RBP15.84■□□□□ 0.13
CTDSPL2-205ENST00000558968 BCANQ96GW7 911 aa15.83■□□□□ 0.12
CTDSPL2-205ENST00000558968 ZFYVE9O95405 1425 aa15.83■□□□□ 0.12
CTDSPL2-205ENST00000558968 CHD2O14647 1828 aaKnown RBP15.82■□□□□ 0.12
CTDSPL2-205ENST00000558968 CHGAP10645 457 aaKnown RBP15.82■□□□□ 0.12
CTDSPL2-205ENST00000558968 RIMS2Q9UQ26 1411 aa15.82■□□□□ 0.12
CTDSPL2-205ENST00000558968 NUP155O75694 1391 aa15.81■□□□□ 0.12
CTDSPL2-205ENST00000558968 NWD1Q149M9 1564 aa15.81■□□□□ 0.12
CTDSPL2-205ENST00000558968 SPHKAPQ2M3C7 1700 aa15.8■□□□□ 0.12
CTDSPL2-205ENST00000558968 TMEM94Q12767 1356 aa15.8■□□□□ 0.12
CTDSPL2-205ENST00000558968 KCNA6P17658 529 aa15.8■□□□□ 0.12
CTDSPL2-205ENST00000558968 RBM33Q96EV2 1170 aaKnown RBP15.8■□□□□ 0.12
CTDSPL2-205ENST00000558968 SOCS7O14512 581 aa15.79■□□□□ 0.12
CTDSPL2-205ENST00000558968 PPP1R15AO75807 674 aaPredicted RBP15.79■□□□□ 0.12
CTDSPL2-205ENST00000558968 PLEKHG1Q9ULL1 1385 aa15.78■□□□□ 0.12
CTDSPL2-205ENST00000558968 PROSER2Q86WR7 435 aaPredicted RBP15.78■□□□□ 0.12
CTDSPL2-205ENST00000558968 NUTM2DQ5VT03 806 aaPredicted RBP15.77■□□□□ 0.12
CTDSPL2-205ENST00000558968 NKTRP30414 1462 aaKnown RBP15.77■□□□□ 0.11
CTDSPL2-205ENST00000558968 RRBP1Q9P2E9 1410 aaKnown RBP15.77■□□□□ 0.11
CTDSPL2-205ENST00000558968 ROBO1Q9Y6N7 1651 aa15.76■□□□□ 0.11
CTDSPL2-205ENST00000558968 HDGFP51858 240 aaKnown RBP15.74■□□□□ 0.11
CTDSPL2-205ENST00000558968 ADAMTS13Q76LX8 1427 aa15.72■□□□□ 0.11
CTDSPL2-205ENST00000558968 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.72■□□□□ 0.11
CTDSPL2-205ENST00000558968 DIP2AQ14689 1571 aa15.71■□□□□ 0.11
CTDSPL2-205ENST00000558968 KIF1BO60333 1816 aa15.71■□□□□ 0.1
CTDSPL2-205ENST00000558968 NAIPQ13075 1403 aa15.7■□□□□ 0.1
CTDSPL2-205ENST00000558968 FAM135BQ49AJ0 1406 aa15.7■□□□□ 0.1
CTDSPL2-205ENST00000558968 CLTCL1P53675 1640 aa15.7■□□□□ 0.1
CTDSPL2-205ENST00000558968 PHF23Q9BUL5 403 aaPredicted RBP15.7■□□□□ 0.1
CTDSPL2-205ENST00000558968 TBX22Q9Y458 520 aa15.7■□□□□ 0.1
CTDSPL2-205ENST00000558968 MSH6P52701 1360 aa15.7■□□□□ 0.1
CTDSPL2-205ENST00000558968 NRXN3Q9Y4C0 1643 aa15.69■□□□□ 0.1
CTDSPL2-205ENST00000558968 PHLPP1O60346 1717 aa15.68■□□□□ 0.1
CTDSPL2-205ENST00000558968 TRPM2O94759 1503 aa15.68■□□□□ 0.1
CTDSPL2-205ENST00000558968 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.67■□□□□ 0.1
CTDSPL2-205ENST00000558968 ZNF326Q5BKZ1 582 aaKnown RBP15.66■□□□□ 0.1
CTDSPL2-205ENST00000558968 PTPRUQ92729 1446 aa15.65■□□□□ 0.1
CTDSPL2-205ENST00000558968 C14orf37Q86TY3 774 aa15.64■□□□□ 0.09
CTDSPL2-205ENST00000558968 SLAIN2Q9P270 581 aa15.64■□□□□ 0.09
CTDSPL2-205ENST00000558968 SETBP1Q9Y6X0 1596 aa15.64■□□□□ 0.09
CTDSPL2-205ENST00000558968 NEXMIFQ5QGS0 1516 aa15.63■□□□□ 0.09
CTDSPL2-205ENST00000558968 PIK3R4Q99570 1358 aa15.63■□□□□ 0.09
CTDSPL2-205ENST00000558968 XRN1Q8IZH2 1706 aaKnown RBP15.63■□□□□ 0.09
CTDSPL2-205ENST00000558968 HFM1A2PYH4 1435 aa15.63■□□□□ 0.09
CTDSPL2-205ENST00000558968 TRIM52Q96A61 297 aa15.63■□□□□ 0.09
CTDSPL2-205ENST00000558968 AMOTL2Q9Y2J4 779 aa15.62■□□□□ 0.09
CTDSPL2-205ENST00000558968 NCOA3Q9Y6Q9 1424 aa15.61■□□□□ 0.09
CTDSPL2-205ENST00000558968 COL16A1Q07092 1604 aaPredicted RBP15.59■□□□□ 0.09
CTDSPL2-205ENST00000558968 RGS17Q9UGC6 210 aaPredicted RBP15.58■□□□□ 0.08
CTDSPL2-205ENST00000558968 METP08581 1390 aa15.58■□□□□ 0.08
CTDSPL2-205ENST00000558968 SETD1AO15047 1707 aaKnown RBP15.57■□□□□ 0.08
CTDSPL2-205ENST00000558968 PPLO60437 1756 aa15.57■□□□□ 0.08
CTDSPL2-205ENST00000558968 ATF3P18847 181 aa15.57■□□□□ 0.08
CTDSPL2-205ENST00000558968 SLC4A1APQ9BWU0 796 aaKnown RBP15.57■□□□□ 0.08
CTDSPL2-205ENST00000558968 C19orf44Q9H6X5 657 aa15.57■□□□□ 0.08
CTDSPL2-205ENST00000558968 CADPS2Q86UW7 1296 aa15.56■□□□□ 0.08
CTDSPL2-205ENST00000558968 NALCNQ8IZF0 1738 aa15.56■□□□□ 0.08
CTDSPL2-205ENST00000558968 AHDC1Q5TGY3 1603 aaPredicted RBP15.54■□□□□ 0.08
CTDSPL2-205ENST00000558968 FOXD1Q16676 465 aa15.54■□□□□ 0.08
CTDSPL2-205ENST00000558968 JCADQ9P266 1359 aa15.53■□□□□ 0.08
CTDSPL2-205ENST00000558968 SHPRHQ149N8 1683 aa15.52■□□□□ 0.08
CTDSPL2-205ENST00000558968 DCCP43146 1447 aa15.51■□□□□ 0.07
CTDSPL2-205ENST00000558968 NHSL1Q5SYE7 1610 aa15.5■□□□□ 0.07
CTDSPL2-205ENST00000558968 ASXL1Q8IXJ9 1541 aa15.5■□□□□ 0.07
CTDSPL2-205ENST00000558968 POTEAQ6S8J7 498 aa15.5■□□□□ 0.07
CTDSPL2-205ENST00000558968 BRINP3Q76B58 766 aa15.5■□□□□ 0.07
CTDSPL2-205ENST00000558968 MST1RQ04912 1400 aa15.5■□□□□ 0.07
CTDSPL2-205ENST00000558968 VGFO15240 615 aaPredicted RBP15.49■□□□□ 0.07
CTDSPL2-205ENST00000558968 LRP6O75581 1613 aa15.49■□□□□ 0.07
CTDSPL2-205ENST00000558968 ADGRL3Q9HAR2 1447 aa15.49■□□□□ 0.07
CTDSPL2-205ENST00000558968 IFT172Q9UG01 1749 aa15.48■□□□□ 0.07
CTDSPL2-205ENST00000558968 RPGRIP1LQ68CZ1 1315 aa15.46■□□□□ 0.07
CTDSPL2-205ENST00000558968 ROBO2Q9HCK4 1378 aa15.46■□□□□ 0.07
CTDSPL2-205ENST00000558968 CCDC144AA2RUR9 1427 aa15.45■□□□□ 0.06
CTDSPL2-205ENST00000558968 PTCH1Q13635 1447 aa15.45■□□□□ 0.06
CTDSPL2-205ENST00000558968 MPHOSPH9Q99550 1183 aa15.45■□□□□ 0.06
CTDSPL2-205ENST00000558968 SPATA31A6Q5VVP1 1343 aa15.44■□□□□ 0.06
CTDSPL2-205ENST00000558968 RGL3Q3MIN7 710 aa15.44■□□□□ 0.06
CTDSPL2-205ENST00000558968 DDX17Q92841 729 aaKnown RBP15.44■□□□□ 0.06
CTDSPL2-205ENST00000558968 MEX3CQ5U5Q3 659 aaKnown RBP15.43■□□□□ 0.06
CTDSPL2-205ENST00000558968 SPATA31E1Q6ZUB1 1445 aa15.43■□□□□ 0.06
CTDSPL2-205ENST00000558968 ADGRF5Q8IZF2 1346 aa15.43■□□□□ 0.06
CTDSPL2-205ENST00000558968 C1orf167Q5SNV9 1468 aa15.41■□□□□ 0.06
CTDSPL2-205ENST00000558968 NUTM2BA6NNL0 878 aaPredicted RBP15.41■□□□□ 0.06
CTDSPL2-205ENST00000558968 NUTM2EB1AL46 878 aaPredicted RBP15.41■□□□□ 0.06
CTDSPL2-205ENST00000558968 NUTM2AQ8IVF1 878 aaPredicted RBP15.41■□□□□ 0.06
CTDSPL2-205ENST00000558968 PRAG1Q86YV5 1406 aa15.41■□□□□ 0.06
CTDSPL2-205ENST00000558968 SETD5Q9C0A6 1442 aa15.41■□□□□ 0.06
CTDSPL2-205ENST00000558968 LAMC1P11047 1609 aa15.39■□□□□ 0.05
CTDSPL2-205ENST00000558968 KNDC1Q76NI1 1749 aa15.38■□□□□ 0.05
CTDSPL2-205ENST00000558968 LRRC59Q96AG4 307 aaKnown RBP15.37■□□□□ 0.05
CTDSPL2-205ENST00000558968 ORAI2Q96SN7 254 aa15.37■□□□□ 0.05
CTDSPL2-205ENST00000558968 STK26Q9P289 416 aa15.37■□□□□ 0.05
CTDSPL2-205ENST00000558968 ANKRD30BQ9BXX2 1392 aa15.36■□□□□ 0.05
CTDSPL2-205ENST00000558968 CDC42BPGQ6DT37 1551 aa15.36■□□□□ 0.05
CTDSPL2-205ENST00000558968 PNPLA6Q8IY17 1366 aa15.36■□□□□ 0.05
CTDSPL2-205ENST00000558968 RAB3GAP2Q9H2M9 1393 aa15.36■□□□□ 0.05
CTDSPL2-205ENST00000558968 PIK3C2GO75747 1445 aa15.35■□□□□ 0.05
CTDSPL2-205ENST00000558968 ZNF772Q68DY9 489 aaPredicted RBP15.35■□□□□ 0.05
CTDSPL2-205ENST00000558968 TMEM132EQ6IEE7 984 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms