RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 EID1Q9Y6B2 187 aa20.88■□□□□ 0.93
VPS18-203ENST00000558855 CHD2O14647 1828 aaKnown RBP20.88■□□□□ 0.93
VPS18-203ENST00000558855 SPHKAPQ2M3C7 1700 aa20.87■□□□□ 0.93
VPS18-203ENST00000558855 SLC26A8Q96RN1 970 aa20.87■□□□□ 0.93
VPS18-203ENST00000558855 RRBP1Q9P2E9 1410 aaKnown RBP20.85■□□□□ 0.93
VPS18-203ENST00000558855 RIMS2Q9UQ26 1411 aa20.85■□□□□ 0.93
VPS18-203ENST00000558855 SLC52A1Q9NWF4 448 aa20.84■□□□□ 0.93
VPS18-203ENST00000558855 RBM33Q96EV2 1170 aaKnown RBP20.83■□□□□ 0.93
VPS18-203ENST00000558855 NUP155O75694 1391 aa20.82■□□□□ 0.92
VPS18-203ENST00000558855 TMEM94Q12767 1356 aa20.81■□□□□ 0.92
VPS18-203ENST00000558855 PLEKHG1Q9ULL1 1385 aa20.8■□□□□ 0.92
VPS18-203ENST00000558855 NRXN3Q9Y4C0 1643 aa20.79■□□□□ 0.92
VPS18-203ENST00000558855 CLTCL1P53675 1640 aa20.78■□□□□ 0.92
VPS18-203ENST00000558855 ROBO1Q9Y6N7 1651 aa20.78■□□□□ 0.92
VPS18-203ENST00000558855 NKTRP30414 1462 aaKnown RBP20.78■□□□□ 0.92
VPS18-203ENST00000558855 NUTM2DQ5VT03 806 aaPredicted RBP20.78■□□□□ 0.92
VPS18-203ENST00000558855 ADAMTS13Q76LX8 1427 aa20.78■□□□□ 0.92
VPS18-203ENST00000558855 KCNA6P17658 529 aa20.77■□□□□ 0.92
VPS18-203ENST00000558855 NAIPQ13075 1403 aa20.77■□□□□ 0.91
VPS18-203ENST00000558855 CHGAP10645 457 aaKnown RBP20.75■□□□□ 0.91
VPS18-203ENST00000558855 DIP2AQ14689 1571 aa20.72■□□□□ 0.91
VPS18-203ENST00000558855 SOCS7O14512 581 aa20.71■□□□□ 0.91
VPS18-203ENST00000558855 PROSER2Q86WR7 435 aaPredicted RBP20.71■□□□□ 0.91
VPS18-203ENST00000558855 TRPM2O94759 1503 aa20.7■□□□□ 0.9
VPS18-203ENST00000558855 BCANQ96GW7 911 aa20.7■□□□□ 0.9
VPS18-203ENST00000558855 PTPRUQ92729 1446 aa20.7■□□□□ 0.9
VPS18-203ENST00000558855 PPP1R15AO75807 674 aaPredicted RBP20.69■□□□□ 0.9
VPS18-203ENST00000558855 XRN1Q8IZH2 1706 aaKnown RBP20.69■□□□□ 0.9
VPS18-203ENST00000558855 NEXMIFQ5QGS0 1516 aa20.68■□□□□ 0.9
VPS18-203ENST00000558855 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.68■□□□□ 0.9
VPS18-203ENST00000558855 KIF1BO60333 1816 aa20.68■□□□□ 0.9
VPS18-203ENST00000558855 FAM135BQ49AJ0 1406 aa20.68■□□□□ 0.9
VPS18-203ENST00000558855 SETBP1Q9Y6X0 1596 aa20.67■□□□□ 0.9
VPS18-203ENST00000558855 PHLPP1O60346 1717 aa20.65■□□□□ 0.9
VPS18-203ENST00000558855 HFM1A2PYH4 1435 aa20.65■□□□□ 0.9
VPS18-203ENST00000558855 TBX22Q9Y458 520 aa20.65■□□□□ 0.9
VPS18-203ENST00000558855 SETD1AO15047 1707 aaKnown RBP20.64■□□□□ 0.9
VPS18-203ENST00000558855 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
VPS18-203ENST00000558855 COL16A1Q07092 1604 aaPredicted RBP20.61■□□□□ 0.89
VPS18-203ENST00000558855 MSH6P52701 1360 aa20.6■□□□□ 0.89
VPS18-203ENST00000558855 PPLO60437 1756 aa20.59■□□□□ 0.89
VPS18-203ENST00000558855 NALCNQ8IZF0 1738 aa20.58■□□□□ 0.88
VPS18-203ENST00000558855 METP08581 1390 aa20.58■□□□□ 0.88
VPS18-203ENST00000558855 PIK3R4Q99570 1358 aa20.58■□□□□ 0.88
VPS18-203ENST00000558855 HDGFP51858 240 aaKnown RBP20.57■□□□□ 0.88
VPS18-203ENST00000558855 RGS17Q9UGC6 210 aaPredicted RBP20.57■□□□□ 0.88
VPS18-203ENST00000558855 SLAIN2Q9P270 581 aa20.54■□□□□ 0.88
VPS18-203ENST00000558855 AMOTL2Q9Y2J4 779 aa20.54■□□□□ 0.88
VPS18-203ENST00000558855 NCOA3Q9Y6Q9 1424 aa20.53■□□□□ 0.88
VPS18-203ENST00000558855 ZNF326Q5BKZ1 582 aaKnown RBP20.53■□□□□ 0.88
VPS18-203ENST00000558855 FOXD1Q16676 465 aa20.52■□□□□ 0.88
VPS18-203ENST00000558855 TRIM52Q96A61 297 aa20.52■□□□□ 0.88
VPS18-203ENST00000558855 IFT172Q9UG01 1749 aa20.52■□□□□ 0.88
VPS18-203ENST00000558855 AHDC1Q5TGY3 1603 aaPredicted RBP20.52■□□□□ 0.88
VPS18-203ENST00000558855 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
VPS18-203ENST00000558855 LRP6O75581 1613 aa20.48■□□□□ 0.87
VPS18-203ENST00000558855 NHSL1Q5SYE7 1610 aa20.48■□□□□ 0.87
VPS18-203ENST00000558855 SHPRHQ149N8 1683 aa20.48■□□□□ 0.87
VPS18-203ENST00000558855 C14orf37Q86TY3 774 aa20.47■□□□□ 0.87
VPS18-203ENST00000558855 SLC4A1APQ9BWU0 796 aaKnown RBP20.47■□□□□ 0.87
VPS18-203ENST00000558855 MST1RQ04912 1400 aa20.46■□□□□ 0.87
VPS18-203ENST00000558855 ASXL1Q8IXJ9 1541 aa20.45■□□□□ 0.86
VPS18-203ENST00000558855 C19orf44Q9H6X5 657 aa20.45■□□□□ 0.86
VPS18-203ENST00000558855 DCCP43146 1447 aa20.44■□□□□ 0.86
VPS18-203ENST00000558855 ADGRL3Q9HAR2 1447 aa20.43■□□□□ 0.86
VPS18-203ENST00000558855 POTEAQ6S8J7 498 aa20.42■□□□□ 0.86
VPS18-203ENST00000558855 BRINP3Q76B58 766 aa20.42■□□□□ 0.86
VPS18-203ENST00000558855 CADPS2Q86UW7 1296 aa20.41■□□□□ 0.86
VPS18-203ENST00000558855 JCADQ9P266 1359 aa20.41■□□□□ 0.86
VPS18-203ENST00000558855 SPATA31E1Q6ZUB1 1445 aa20.41■□□□□ 0.86
VPS18-203ENST00000558855 ATF3P18847 181 aa20.4■□□□□ 0.86
VPS18-203ENST00000558855 ROBO2Q9HCK4 1378 aa20.4■□□□□ 0.86
VPS18-203ENST00000558855 PTCH1Q13635 1447 aa20.38■□□□□ 0.85
VPS18-203ENST00000558855 PRAG1Q86YV5 1406 aa20.38■□□□□ 0.85
VPS18-203ENST00000558855 DDX17Q92841 729 aaKnown RBP20.37■□□□□ 0.85
VPS18-203ENST00000558855 ADGRF5Q8IZF2 1346 aa20.36■□□□□ 0.85
VPS18-203ENST00000558855 LAMC1P11047 1609 aa20.35■□□□□ 0.85
VPS18-203ENST00000558855 MPHOSPH9Q99550 1183 aa20.35■□□□□ 0.85
VPS18-203ENST00000558855 CCDC144AA2RUR9 1427 aa20.34■□□□□ 0.85
VPS18-203ENST00000558855 KNDC1Q76NI1 1749 aa20.33■□□□□ 0.85
VPS18-203ENST00000558855 VGFO15240 615 aaPredicted RBP20.33■□□□□ 0.85
VPS18-203ENST00000558855 RPGRIP1LQ68CZ1 1315 aa20.32■□□□□ 0.84
VPS18-203ENST00000558855 C1orf167Q5SNV9 1468 aa20.32■□□□□ 0.84
VPS18-203ENST00000558855 SETD5Q9C0A6 1442 aa20.31■□□□□ 0.84
VPS18-203ENST00000558855 RGL3Q3MIN7 710 aa20.29■□□□□ 0.84
VPS18-203ENST00000558855 CDC42BPGQ6DT37 1551 aa20.29■□□□□ 0.84
VPS18-203ENST00000558855 RAB3GAP2Q9H2M9 1393 aa20.28■□□□□ 0.84
VPS18-203ENST00000558855 SPATA31A6Q5VVP1 1343 aa20.27■□□□□ 0.84
VPS18-203ENST00000558855 PIK3C2GO75747 1445 aa20.27■□□□□ 0.84
VPS18-203ENST00000558855 PNPLA6Q8IY17 1366 aa20.25■□□□□ 0.83
VPS18-203ENST00000558855 PLEKHH1Q9ULM0 1364 aa20.25■□□□□ 0.83
VPS18-203ENST00000558855 ORAI2Q96SN7 254 aa20.25■□□□□ 0.83
VPS18-203ENST00000558855 TECPR2O15040 1411 aa20.25■□□□□ 0.83
VPS18-203ENST00000558855 RGPD8O14715 1765 aaPredicted RBP20.24■□□□□ 0.83
VPS18-203ENST00000558855 FMN2Q9NZ56 1722 aa20.24■□□□□ 0.83
VPS18-203ENST00000558855 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
VPS18-203ENST00000558855 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
VPS18-203ENST00000558855 NUTM2BA6NNL0 878 aaPredicted RBP20.22■□□□□ 0.83
VPS18-203ENST00000558855 NUTM2EB1AL46 878 aaPredicted RBP20.22■□□□□ 0.83
VPS18-203ENST00000558855 NUTM2AQ8IVF1 878 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms