RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 ANKRD50Q9ULJ7 1429 aa23.45■■□□□ 1.34
RPL28-206ENST00000558752 XIRP1Q702N8 1843 aaKnown RBP23.45■■□□□ 1.34
RPL28-206ENST00000558752 TET3O43151 1660 aa23.43■■□□□ 1.34
RPL28-206ENST00000558752 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
RPL28-206ENST00000558752 PPP1R15AO75807 674 aaPredicted RBP23.42■■□□□ 1.34
RPL28-206ENST00000558752 MSH6P52701 1360 aa23.4■■□□□ 1.34
RPL28-206ENST00000558752 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.38■■□□□ 1.33
RPL28-206ENST00000558752 PLEKHG1Q9ULL1 1385 aa23.37■■□□□ 1.33
RPL28-206ENST00000558752 NWD1Q149M9 1564 aa23.36■■□□□ 1.33
RPL28-206ENST00000558752 RIMS2Q9UQ26 1411 aa23.33■■□□□ 1.33
RPL28-206ENST00000558752 ROBO1Q9Y6N7 1651 aa23.33■■□□□ 1.33
RPL28-206ENST00000558752 SLAIN2Q9P270 581 aa23.33■■□□□ 1.33
RPL28-206ENST00000558752 CHGAP10645 457 aaKnown RBP23.32■■□□□ 1.32
RPL28-206ENST00000558752 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
RPL28-206ENST00000558752 ZFYVE9O95405 1425 aa23.32■■□□□ 1.32
RPL28-206ENST00000558752 GCC2Q8IWJ2 1684 aa23.31■■□□□ 1.32
RPL28-206ENST00000558752 NCOA3Q9Y6Q9 1424 aa23.3■■□□□ 1.32
RPL28-206ENST00000558752 C14orf37Q86TY3 774 aa23.29■■□□□ 1.32
RPL28-206ENST00000558752 TMEM131LA2VDJ0 1609 aa23.28■■□□□ 1.32
RPL28-206ENST00000558752 ROCK1Q13464 1354 aa23.27■■□□□ 1.32
RPL28-206ENST00000558752 UNC13BO14795 1591 aa23.27■■□□□ 1.32
RPL28-206ENST00000558752 CHD2O14647 1828 aaKnown RBP23.27■■□□□ 1.32
RPL28-206ENST00000558752 JCADQ9P266 1359 aa23.26■■□□□ 1.31
RPL28-206ENST00000558752 MYO5BQ9ULV0 1848 aa23.25■■□□□ 1.31
RPL28-206ENST00000558752 PIK3R4Q99570 1358 aa23.25■■□□□ 1.31
RPL28-206ENST00000558752 SETD1AO15047 1707 aaKnown RBP23.24■■□□□ 1.31
RPL28-206ENST00000558752 CADPS2Q86UW7 1296 aa23.23■■□□□ 1.31
RPL28-206ENST00000558752 DIP2AQ14689 1571 aa23.23■■□□□ 1.31
RPL28-206ENST00000558752 ATF3P18847 181 aa23.22■■□□□ 1.31
RPL28-206ENST00000558752 PHLPP1O60346 1717 aa23.22■■□□□ 1.31
RPL28-206ENST00000558752 C19orf44Q9H6X5 657 aa23.21■■□□□ 1.31
RPL28-206ENST00000558752 NUP155O75694 1391 aa23.21■■□□□ 1.31
RPL28-206ENST00000558752 E9PCH4 1651 aa23.19■■□□□ 1.3
RPL28-206ENST00000558752 IQGAP3Q86VI3 1631 aa23.19■■□□□ 1.3
RPL28-206ENST00000558752 PPARGC1BQ86YN6 1023 aaKnown RBP23.19■■□□□ 1.3
RPL28-206ENST00000558752 NUTM2DQ5VT03 806 aaPredicted RBP23.18■■□□□ 1.3
RPL28-206ENST00000558752 ADAMTS13Q76LX8 1427 aa23.16■■□□□ 1.3
RPL28-206ENST00000558752 SPATA31A6Q5VVP1 1343 aa23.16■■□□□ 1.3
RPL28-206ENST00000558752 TRPM2O94759 1503 aa23.15■■□□□ 1.3
RPL28-206ENST00000558752 LRP6O75581 1613 aa23.15■■□□□ 1.3
RPL28-206ENST00000558752 ITGAEP38570 1179 aa23.14■■□□□ 1.29
RPL28-206ENST00000558752 UPF1Q92900 1129 aaKnown RBP eCLIP23.14■■□□□ 1.29
RPL28-206ENST00000558752 AMOTL2Q9Y2J4 779 aa23.14■■□□□ 1.29
RPL28-206ENST00000558752 MEX3CQ5U5Q3 659 aaKnown RBP23.13■■□□□ 1.29
RPL28-206ENST00000558752 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
RPL28-206ENST00000558752 ZNF772Q68DY9 489 aaPredicted RBP23.11■■□□□ 1.29
RPL28-206ENST00000558752 ZNF326Q5BKZ1 582 aaKnown RBP23.1■■□□□ 1.29
RPL28-206ENST00000558752 COL16A1Q07092 1604 aaPredicted RBP23.1■■□□□ 1.29
RPL28-206ENST00000558752 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.1■■□□□ 1.29
RPL28-206ENST00000558752 DCCP43146 1447 aa23.08■■□□□ 1.28
RPL28-206ENST00000558752 AHDC1Q5TGY3 1603 aaPredicted RBP23.07■■□□□ 1.28
RPL28-206ENST00000558752 RRBP1Q9P2E9 1410 aaKnown RBP23.04■■□□□ 1.28
RPL28-206ENST00000558752 BRINP3Q76B58 766 aa23.03■■□□□ 1.28
RPL28-206ENST00000558752 SPHKAPQ2M3C7 1700 aa23.02■■□□□ 1.28
RPL28-206ENST00000558752 SETBP1Q9Y6X0 1596 aa23.01■■□□□ 1.27
RPL28-206ENST00000558752 PTPRUQ92729 1446 aa23.01■■□□□ 1.27
RPL28-206ENST00000558752 SHPRHQ149N8 1683 aa23.01■■□□□ 1.27
RPL28-206ENST00000558752 NUTM2BA6NNL0 878 aaPredicted RBP22.98■■□□□ 1.27
RPL28-206ENST00000558752 NUTM2EB1AL46 878 aaPredicted RBP22.98■■□□□ 1.27
RPL28-206ENST00000558752 NUTM2AQ8IVF1 878 aaPredicted RBP22.98■■□□□ 1.27
RPL28-206ENST00000558752 LRRC59Q96AG4 307 aaKnown RBP22.98■■□□□ 1.27
RPL28-206ENST00000558752 XRN1Q8IZH2 1706 aaKnown RBP22.97■■□□□ 1.27
RPL28-206ENST00000558752 RXRBP28702 533 aa22.96■■□□□ 1.27
RPL28-206ENST00000558752 NRXN3Q9Y4C0 1643 aa22.95■■□□□ 1.26
RPL28-206ENST00000558752 ASXL1Q8IXJ9 1541 aa22.94■■□□□ 1.26
RPL28-206ENST00000558752 MST1RQ04912 1400 aa22.94■■□□□ 1.26
RPL28-206ENST00000558752 SETD5Q9C0A6 1442 aa22.94■■□□□ 1.26
RPL28-206ENST00000558752 METP08581 1390 aa22.93■■□□□ 1.26
RPL28-206ENST00000558752 VGFO15240 615 aaPredicted RBP22.93■■□□□ 1.26
RPL28-206ENST00000558752 ADGRL3Q9HAR2 1447 aa22.92■■□□□ 1.26
RPL28-206ENST00000558752 KIF1BO60333 1816 aa22.91■■□□□ 1.26
RPL28-206ENST00000558752 AFF2P51816 1311 aa22.89■■□□□ 1.26
RPL28-206ENST00000558752 DDX17Q92841 729 aaKnown RBP22.89■■□□□ 1.25
RPL28-206ENST00000558752 NEXMIFQ5QGS0 1516 aa22.88■■□□□ 1.25
RPL28-206ENST00000558752 RPGRIP1LQ68CZ1 1315 aa22.88■■□□□ 1.25
RPL28-206ENST00000558752 CLTCL1P53675 1640 aa22.88■■□□□ 1.25
RPL28-206ENST00000558752 NHSL1Q5SYE7 1610 aa22.88■■□□□ 1.25
RPL28-206ENST00000558752 CDK12Q9NYV4 1490 aaPredicted RBP22.87■■□□□ 1.25
RPL28-206ENST00000558752 NAIPQ13075 1403 aa22.84■■□□□ 1.25
RPL28-206ENST00000558752 PTCH1Q13635 1447 aa22.83■■□□□ 1.25
RPL28-206ENST00000558752 C8orf37Q96NL8 207 aa22.83■■□□□ 1.25
RPL28-206ENST00000558752 SRCAPQ6ZRS2 3230 aa22.82■■□□□ 1.24
RPL28-206ENST00000558752 RGS12O14924 1447 aa22.82■■□□□ 1.24
RPL28-206ENST00000558752 PNPLA6Q8IY17 1366 aa22.81■■□□□ 1.24
RPL28-206ENST00000558752 RBM6P78332 1123 aaKnown RBP22.81■■□□□ 1.24
RPL28-206ENST00000558752 SLC4A1APQ9BWU0 796 aaKnown RBP22.81■■□□□ 1.24
RPL28-206ENST00000558752 QTRT2Q9H974 415 aaKnown RBP22.81■■□□□ 1.24
RPL28-206ENST00000558752 C1orf167Q5SNV9 1468 aa22.8■■□□□ 1.24
RPL28-206ENST00000558752 NALCNQ8IZF0 1738 aa22.8■■□□□ 1.24
RPL28-206ENST00000558752 NGLY1Q96IV0 654 aa22.79■■□□□ 1.24
RPL28-206ENST00000558752 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
RPL28-206ENST00000558752 HFM1A2PYH4 1435 aa22.78■■□□□ 1.24
RPL28-206ENST00000558752 SOS2Q07890 1332 aaPredicted RBP22.76■■□□□ 1.23
RPL28-206ENST00000558752 PRAG1Q86YV5 1406 aa22.75■■□□□ 1.23
RPL28-206ENST00000558752 ROBO2Q9HCK4 1378 aa22.75■■□□□ 1.23
RPL28-206ENST00000558752 ADAMTS2O95450 1211 aa22.74■■□□□ 1.23
RPL28-206ENST00000558752 ORAI2Q96SN7 254 aa22.73■■□□□ 1.23
RPL28-206ENST00000558752 LAMC1P11047 1609 aa22.72■■□□□ 1.23
RPL28-206ENST00000558752 USP21Q9UK80 565 aa22.7■■□□□ 1.22
RPL28-206ENST00000558752 NPHP3Q7Z494 1330 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms