RNA–Protein interactions for RNA: ENST00000558385.1

LINC00593-201, long intergenic non-protein coding RNA 593, humanhuman

TSL 3

Gene LINC00593, Length 763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00593-201ENST00000558385 CHGAP10645 457 aaKnown RBP17.38■□□□□ 0.37
LINC00593-201ENST00000558385 ZNF142P52746 1687 aaPredicted RBP17.38■□□□□ 0.37
LINC00593-201ENST00000558385 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
LINC00593-201ENST00000558385 UHRF1BP1Q6BDS2 1440 aa17.38■□□□□ 0.37
LINC00593-201ENST00000558385 CEP170BQ9Y4F5 1589 aaPredicted RBP17.37■□□□□ 0.37
LINC00593-201ENST00000558385 RGL3Q3MIN7 710 aa17.37■□□□□ 0.37
LINC00593-201ENST00000558385 L3MBTL2Q969R5 705 aa17.37■□□□□ 0.37
LINC00593-201ENST00000558385 HDGFP51858 240 aaKnown RBP17.36■□□□□ 0.37
LINC00593-201ENST00000558385 MYO5BQ9ULV0 1848 aa17.35■□□□□ 0.37
LINC00593-201ENST00000558385 ZNF326Q5BKZ1 582 aaKnown RBP17.34■□□□□ 0.37
LINC00593-201ENST00000558385 ZFYVE9O95405 1425 aa17.33■□□□□ 0.36
LINC00593-201ENST00000558385 TMEM2Q9UHN6 1383 aa17.33■□□□□ 0.36
LINC00593-201ENST00000558385 VGFO15240 615 aaPredicted RBP17.33■□□□□ 0.36
LINC00593-201ENST00000558385 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.33■□□□□ 0.36
LINC00593-201ENST00000558385 SLIT1O75093 1534 aa17.32■□□□□ 0.36
LINC00593-201ENST00000558385 ARHGAP23Q9P227 1491 aa17.32■□□□□ 0.36
LINC00593-201ENST00000558385 PPP1R15AO75807 674 aaPredicted RBP17.32■□□□□ 0.36
LINC00593-201ENST00000558385 DCAF11Q8TEB1 546 aa17.32■□□□□ 0.36
LINC00593-201ENST00000558385 IFT172Q9UG01 1749 aa17.31■□□□□ 0.36
LINC00593-201ENST00000558385 PPLO60437 1756 aa17.3■□□□□ 0.36
LINC00593-201ENST00000558385 NEXMIFQ5QGS0 1516 aa17.3■□□□□ 0.36
LINC00593-201ENST00000558385 STRCQ7RTU9 1775 aa17.3■□□□□ 0.36
LINC00593-201ENST00000558385 RIMS2Q9UQ26 1411 aa17.3■□□□□ 0.36
LINC00593-201ENST00000558385 MYOM2P54296 1465 aa17.29■□□□□ 0.36
LINC00593-201ENST00000558385 EID1Q9Y6B2 187 aa17.28■□□□□ 0.36
LINC00593-201ENST00000558385 IQSEC2Q5JU85 1478 aa17.27■□□□□ 0.36
LINC00593-201ENST00000558385 NRXN1Q9ULB1 1477 aa17.26■□□□□ 0.35
LINC00593-201ENST00000558385 TXNDC2Q86VQ3 553 aa17.26■□□□□ 0.35
LINC00593-201ENST00000558385 ANKLE2Q86XL3 938 aa17.26■□□□□ 0.35
LINC00593-201ENST00000558385 KDM2AQ9Y2K7 1162 aa17.26■□□□□ 0.35
LINC00593-201ENST00000558385 LTBP4Q8N2S1 1624 aa17.25■□□□□ 0.35
LINC00593-201ENST00000558385 LTKP29376 864 aa17.25■□□□□ 0.35
LINC00593-201ENST00000558385 ADGRF5Q8IZF2 1346 aa17.23■□□□□ 0.35
LINC00593-201ENST00000558385 PRAG1Q86YV5 1406 aa17.23■□□□□ 0.35
LINC00593-201ENST00000558385 SCAF11Q99590 1463 aaKnown RBP17.22■□□□□ 0.35
LINC00593-201ENST00000558385 PLEKHG1Q9ULL1 1385 aa17.21■□□□□ 0.35
LINC00593-201ENST00000558385 PIK3C2GO75747 1445 aa17.21■□□□□ 0.34
LINC00593-201ENST00000558385 NBPF8Q3BBV2 869 aa17.2■□□□□ 0.34
LINC00593-201ENST00000558385 C14orf93Q9H972 538 aaKnown RBP17.2■□□□□ 0.34
LINC00593-201ENST00000558385 MED14O60244 1454 aa17.19■□□□□ 0.34
LINC00593-201ENST00000558385 KIAA1210Q9ULL0 1709 aa17.19■□□□□ 0.34
LINC00593-201ENST00000558385 NUTM2DQ5VT03 806 aaPredicted RBP17.19■□□□□ 0.34
LINC00593-201ENST00000558385 SETBP1Q9Y6X0 1596 aa17.18■□□□□ 0.34
LINC00593-201ENST00000558385 POLR1AO95602 1720 aaPredicted RBP17.16■□□□□ 0.34
LINC00593-201ENST00000558385 TBX22Q9Y458 520 aa17.16■□□□□ 0.34
LINC00593-201ENST00000558385 LAMC1P11047 1609 aa17.15■□□□□ 0.34
LINC00593-201ENST00000558385 TRPM1Q7Z4N2 1603 aa17.14■□□□□ 0.33
LINC00593-201ENST00000558385 CENPBP07199 599 aaPredicted RBP17.14■□□□□ 0.33
LINC00593-201ENST00000558385 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.33
LINC00593-201ENST00000558385 NCKAP5LQ9HCH0 1330 aa17.14■□□□□ 0.33
LINC00593-201ENST00000558385 ALKQ9UM73 1620 aa17.14■□□□□ 0.33
LINC00593-201ENST00000558385 NPHP4O75161 1426 aaPredicted RBP17.13■□□□□ 0.33
LINC00593-201ENST00000558385 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
LINC00593-201ENST00000558385 RALGAPBQ86X10 1494 aa17.13■□□□□ 0.33
LINC00593-201ENST00000558385 NRXN3Q9Y4C0 1643 aa17.13■□□□□ 0.33
LINC00593-201ENST00000558385 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
LINC00593-201ENST00000558385 DIP2AQ14689 1571 aa17.12■□□□□ 0.33
LINC00593-201ENST00000558385 UBAP1LF5GYI3 381 aa17.12■□□□□ 0.33
LINC00593-201ENST00000558385 NBPF1Q3BBV0 1214 aa17.11■□□□□ 0.33
LINC00593-201ENST00000558385 MIER1Q8N108 512 aa17.11■□□□□ 0.33
LINC00593-201ENST00000558385 BCANQ96GW7 911 aa17.11■□□□□ 0.33
LINC00593-201ENST00000558385 PIK3R4Q99570 1358 aa17.11■□□□□ 0.33
LINC00593-201ENST00000558385 IQGAP1P46940 1657 aa17.1■□□□□ 0.33
LINC00593-201ENST00000558385 SETD1AO15047 1707 aaKnown RBP17.1■□□□□ 0.33
LINC00593-201ENST00000558385 ROCK2O75116 1388 aaKnown RBP17.09■□□□□ 0.33
LINC00593-201ENST00000558385 ADGRB1O14514 1584 aa17.08■□□□□ 0.32
LINC00593-201ENST00000558385 SLC26A8Q96RN1 970 aa17.07■□□□□ 0.32
LINC00593-201ENST00000558385 ZNF335Q9H4Z2 1342 aaPredicted RBP17.06■□□□□ 0.32
LINC00593-201ENST00000558385 CARD11Q9BXL7 1154 aa17.06■□□□□ 0.32
LINC00593-201ENST00000558385 METP08581 1390 aa17.05■□□□□ 0.32
LINC00593-201ENST00000558385 TMEM132EQ6IEE7 984 aa17.05■□□□□ 0.32
LINC00593-201ENST00000558385 SIRT1Q96EB6 747 aa17.05■□□□□ 0.32
LINC00593-201ENST00000558385 LRPPRCP42704 1394 aaKnown RBP17.04■□□□□ 0.32
LINC00593-201ENST00000558385 ABCC11Q96J66 1382 aa17.04■□□□□ 0.32
LINC00593-201ENST00000558385 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
LINC00593-201ENST00000558385 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
LINC00593-201ENST00000558385 ASXL1Q8IXJ9 1541 aa17.03■□□□□ 0.32
LINC00593-201ENST00000558385 CHD2O14647 1828 aaKnown RBP17.03■□□□□ 0.32
LINC00593-201ENST00000558385 SENP3Q9H4L4 574 aaPredicted RBP17.02■□□□□ 0.32
LINC00593-201ENST00000558385 TECPR2O15040 1411 aa17.02■□□□□ 0.31
LINC00593-201ENST00000558385 KCNA6P17658 529 aa17.01■□□□□ 0.31
LINC00593-201ENST00000558385 EIF4G2P78344 907 aaKnown RBP eCLIP17.01■□□□□ 0.31
LINC00593-201ENST00000558385 AMOTL2Q9Y2J4 779 aa17■□□□□ 0.31
LINC00593-201ENST00000558385 DLC1Q96QB1 1528 aa17■□□□□ 0.31
LINC00593-201ENST00000558385 PTPRUQ92729 1446 aa16.99■□□□□ 0.31
LINC00593-201ENST00000558385 KNDC1Q76NI1 1749 aa16.99■□□□□ 0.31
LINC00593-201ENST00000558385 SLC24A1O60721 1099 aa16.98■□□□□ 0.31
LINC00593-201ENST00000558385 HSPA1LP34931 641 aa16.98■□□□□ 0.31
LINC00593-201ENST00000558385 EIF3AQ14152 1382 aaKnown RBP16.98■□□□□ 0.31
LINC00593-201ENST00000558385 USP47Q96K76 1375 aa16.98■□□□□ 0.31
LINC00593-201ENST00000558385 FAM135BQ49AJ0 1406 aa16.97■□□□□ 0.31
LINC00593-201ENST00000558385 TRAK1Q9UPV9 953 aa16.97■□□□□ 0.31
LINC00593-201ENST00000558385 XRN1Q8IZH2 1706 aaKnown RBP16.96■□□□□ 0.31
LINC00593-201ENST00000558385 STK26Q9P289 416 aa16.96■□□□□ 0.31
LINC00593-201ENST00000558385 PTCH1Q13635 1447 aa16.96■□□□□ 0.3
LINC00593-201ENST00000558385 NWD1Q149M9 1564 aa16.95■□□□□ 0.3
LINC00593-201ENST00000558385 CPS1P31327 1500 aa16.95■□□□□ 0.3
LINC00593-201ENST00000558385 ARHGEF28Q8N1W1 1705 aaKnown RBP16.94■□□□□ 0.3
LINC00593-201ENST00000558385 HSPA5P11021 654 aaKnown RBP16.94■□□□□ 0.3
LINC00593-201ENST00000558385 SBNO2Q9Y2G9 1366 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms