RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 IDI1Q13907 227 aa11.67□□□□□ -0.54
RTF1-205ENST00000558298 ANKLE2Q86XL3 938 aa11.67□□□□□ -0.54
RTF1-205ENST00000558298 RAB3GAP2Q9H2M9 1393 aa11.67□□□□□ -0.54
RTF1-205ENST00000558298 GTF3C3Q9Y5Q9 886 aa11.66□□□□□ -0.54
RTF1-205ENST00000558298 ALKQ9UM73 1620 aa11.66□□□□□ -0.54
RTF1-205ENST00000558298 KIF1BO60333 1816 aa11.65□□□□□ -0.54
RTF1-205ENST00000558298 CLTCL1P53675 1640 aa11.65□□□□□ -0.54
RTF1-205ENST00000558298 LTKP29376 864 aa11.65□□□□□ -0.54
RTF1-205ENST00000558298 NWD1Q149M9 1564 aa11.65□□□□□ -0.54
RTF1-205ENST00000558298 XIRP1Q702N8 1843 aaKnown RBP11.64□□□□□ -0.55
RTF1-205ENST00000558298 NEUROD1Q13562 356 aa11.63□□□□□ -0.55
RTF1-205ENST00000558298 LRRC7Q96NW7 1537 aa11.61□□□□□ -0.55
RTF1-205ENST00000558298 NRXN3Q9Y4C0 1643 aa11.61□□□□□ -0.55
RTF1-205ENST00000558298 DIEXFQ68CQ4 756 aaKnown RBP11.61□□□□□ -0.55
RTF1-205ENST00000558298 DIP2AQ14689 1571 aa11.61□□□□□ -0.55
RTF1-205ENST00000558298 IFT172Q9UG01 1749 aa11.6□□□□□ -0.55
RTF1-205ENST00000558298 PLEKHG1Q9ULL1 1385 aa11.59□□□□□ -0.55
RTF1-205ENST00000558298 TXNDC2Q86VQ3 553 aa11.59□□□□□ -0.55
RTF1-205ENST00000558298 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
RTF1-205ENST00000558298 NEXMIFQ5QGS0 1516 aa11.59□□□□□ -0.55
RTF1-205ENST00000558298 RIMS2Q9UQ26 1411 aa11.59□□□□□ -0.55
RTF1-205ENST00000558298 SETBP1Q9Y6X0 1596 aa11.58□□□□□ -0.55
RTF1-205ENST00000558298 CHD2O14647 1828 aaKnown RBP11.58□□□□□ -0.56
RTF1-205ENST00000558298 MPHOSPH9Q99550 1183 aa11.58□□□□□ -0.56
RTF1-205ENST00000558298 PPLO60437 1756 aa11.58□□□□□ -0.56
RTF1-205ENST00000558298 ADAMTS13Q76LX8 1427 aa11.58□□□□□ -0.56
RTF1-205ENST00000558298 NKTRP30414 1462 aaKnown RBP11.57□□□□□ -0.56
RTF1-205ENST00000558298 SPATA31E1Q6ZUB1 1445 aa11.57□□□□□ -0.56
RTF1-205ENST00000558298 CCDC144AA2RUR9 1427 aa11.56□□□□□ -0.56
RTF1-205ENST00000558298 SETD1AO15047 1707 aaKnown RBP11.55□□□□□ -0.56
RTF1-205ENST00000558298 TRIM52Q96A61 297 aa11.55□□□□□ -0.56
RTF1-205ENST00000558298 EID1Q9Y6B2 187 aa11.55□□□□□ -0.56
RTF1-205ENST00000558298 ANKRD30BQ9BXX2 1392 aa11.54□□□□□ -0.56
RTF1-205ENST00000558298 PRAG1Q86YV5 1406 aa11.54□□□□□ -0.56
RTF1-205ENST00000558298 XRN1Q8IZH2 1706 aaKnown RBP11.54□□□□□ -0.56
RTF1-205ENST00000558298 HDGFP51858 240 aaKnown RBP11.53□□□□□ -0.56
RTF1-205ENST00000558298 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.53□□□□□ -0.56
RTF1-205ENST00000558298 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
RTF1-205ENST00000558298 RPGRIP1LQ68CZ1 1315 aa11.53□□□□□ -0.56
RTF1-205ENST00000558298 PIK3R4Q99570 1358 aa11.53□□□□□ -0.56
RTF1-205ENST00000558298 MYOM2P54296 1465 aa11.52□□□□□ -0.56
RTF1-205ENST00000558298 CCER1Q8TC90 406 aaPredicted RBP11.51□□□□□ -0.57
RTF1-205ENST00000558298 NRXN1Q9ULB1 1477 aa11.51□□□□□ -0.57
RTF1-205ENST00000558298 LAMC1P11047 1609 aa11.5□□□□□ -0.57
RTF1-205ENST00000558298 KCNA6P17658 529 aa11.5□□□□□ -0.57
RTF1-205ENST00000558298 SLC26A8Q96RN1 970 aa11.49□□□□□ -0.57
RTF1-205ENST00000558298 TBX22Q9Y458 520 aa11.49□□□□□ -0.57
RTF1-205ENST00000558298 PTPRUQ92729 1446 aa11.49□□□□□ -0.57
RTF1-205ENST00000558298 TMEM94Q12767 1356 aa11.48□□□□□ -0.57
RTF1-205ENST00000558298 NCOA3Q9Y6Q9 1424 aa11.47□□□□□ -0.57
RTF1-205ENST00000558298 UBAP1LF5GYI3 381 aa11.47□□□□□ -0.57
RTF1-205ENST00000558298 STAC3Q96MF2 364 aa11.47□□□□□ -0.57
RTF1-205ENST00000558298 PIK3C2GO75747 1445 aa11.46□□□□□ -0.57
RTF1-205ENST00000558298 KNDC1Q76NI1 1749 aa11.46□□□□□ -0.58
RTF1-205ENST00000558298 DHX57Q6P158 1386 aaKnown RBP11.44□□□□□ -0.58
RTF1-205ENST00000558298 KIAA1210Q9ULL0 1709 aa11.44□□□□□ -0.58
RTF1-205ENST00000558298 ZNF316A6NFI3 1004 aaPredicted RBP11.44□□□□□ -0.58
RTF1-205ENST00000558298 VGFO15240 615 aaPredicted RBP11.44□□□□□ -0.58
RTF1-205ENST00000558298 TOM1O60784 492 aa11.44□□□□□ -0.58
RTF1-205ENST00000558298 PPP1R15AO75807 674 aaPredicted RBP11.44□□□□□ -0.58
RTF1-205ENST00000558298 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
RTF1-205ENST00000558298 FOXD1Q16676 465 aa11.44□□□□□ -0.58
RTF1-205ENST00000558298 NUTM2DQ5VT03 806 aaPredicted RBP11.44□□□□□ -0.58
RTF1-205ENST00000558298 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.43□□□□□ -0.58
RTF1-205ENST00000558298 METP08581 1390 aa11.43□□□□□ -0.58
RTF1-205ENST00000558298 ASXL1Q8IXJ9 1541 aa11.43□□□□□ -0.58
RTF1-205ENST00000558298 PTCH1Q13635 1447 aa11.43□□□□□ -0.58
RTF1-205ENST00000558298 FAM135BQ49AJ0 1406 aa11.43□□□□□ -0.58
RTF1-205ENST00000558298 ROBO1Q9Y6N7 1651 aa11.43□□□□□ -0.58
RTF1-205ENST00000558298 NALCNQ8IZF0 1738 aa11.42□□□□□ -0.58
RTF1-205ENST00000558298 TECPR2O15040 1411 aa11.42□□□□□ -0.58
RTF1-205ENST00000558298 DCCP43146 1447 aa11.41□□□□□ -0.58
RTF1-205ENST00000558298 HSPA1LP34931 641 aa11.39□□□□□ -0.59
RTF1-205ENST00000558298 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
RTF1-205ENST00000558298 PROSER2Q86WR7 435 aaPredicted RBP11.39□□□□□ -0.59
RTF1-205ENST00000558298 ANP32EQ9BTT0 268 aa11.39□□□□□ -0.59
RTF1-205ENST00000558298 ADGRB1O14514 1584 aa11.38□□□□□ -0.59
RTF1-205ENST00000558298 MSH6P52701 1360 aa11.38□□□□□ -0.59
RTF1-205ENST00000558298 MED1Q15648 1581 aaPredicted RBP11.37□□□□□ -0.59
RTF1-205ENST00000558298 ADGRL3Q9HAR2 1447 aa11.37□□□□□ -0.59
RTF1-205ENST00000558298 DLC1Q96QB1 1528 aa11.37□□□□□ -0.59
RTF1-205ENST00000558298 RBM33Q96EV2 1170 aaKnown RBP11.37□□□□□ -0.59
RTF1-205ENST00000558298 SENP3Q9H4L4 574 aaPredicted RBP11.37□□□□□ -0.59
RTF1-205ENST00000558298 AMOTL2Q9Y2J4 779 aa11.37□□□□□ -0.59
RTF1-205ENST00000558298 COL16A1Q07092 1604 aaPredicted RBP11.37□□□□□ -0.59
RTF1-205ENST00000558298 AHDC1Q5TGY3 1603 aaPredicted RBP11.37□□□□□ -0.59
RTF1-205ENST00000558298 ADGRF5Q8IZF2 1346 aa11.36□□□□□ -0.59
RTF1-205ENST00000558298 PIP4K2BP78356 416 aa11.36□□□□□ -0.59
RTF1-205ENST00000558298 BCANQ96GW7 911 aa11.36□□□□□ -0.59
RTF1-205ENST00000558298 ROBO2Q9HCK4 1378 aa11.35□□□□□ -0.59
RTF1-205ENST00000558298 NHSL1Q5SYE7 1610 aa11.35□□□□□ -0.59
RTF1-205ENST00000558298 MST1RQ04912 1400 aa11.35□□□□□ -0.59
RTF1-205ENST00000558298 CDC42BPGQ6DT37 1551 aa11.34□□□□□ -0.59
RTF1-205ENST00000558298 LRPPRCP42704 1394 aaKnown RBP11.34□□□□□ -0.59
RTF1-205ENST00000558298 ABCC11Q96J66 1382 aa11.34□□□□□ -0.59
RTF1-205ENST00000558298 ERICH6Q7L0X2 663 aa11.34□□□□□ -0.59
RTF1-205ENST00000558298 PHLPP1O60346 1717 aa11.33□□□□□ -0.6
RTF1-205ENST00000558298 C19orf44Q9H6X5 657 aa11.33□□□□□ -0.6
RTF1-205ENST00000558298 C14orf93Q9H972 538 aaKnown RBP11.33□□□□□ -0.6
RTF1-205ENST00000558298 ADGRB2O60241 1585 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms