RNA–Protein interactions for RNA: ENST00000558276.7

PBX4-204, Transcript of PBX homeobox 4, humanhuman

TSL 2

Gene PBX4, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-204ENST00000558276 PPP1R15AO75807 674 aaPredicted RBP32.04■■■□□ 2.72
PBX4-204ENST00000558276 E9PCH4 1651 aa32.04■■■□□ 2.72
PBX4-204ENST00000558276 ITGAEP38570 1179 aa32.03■■■□□ 2.72
PBX4-204ENST00000558276 HDGFP51858 240 aaKnown RBP32.03■■■□□ 2.72
PBX4-204ENST00000558276 TMEM94Q12767 1356 aa32.03■■■□□ 2.72
PBX4-204ENST00000558276 IQGAP3Q86VI3 1631 aa32.02■■■□□ 2.72
PBX4-204ENST00000558276 TMEM131LA2VDJ0 1609 aa32.01■■■□□ 2.72
PBX4-204ENST00000558276 CHGAP10645 457 aaKnown RBP32.01■■■□□ 2.71
PBX4-204ENST00000558276 PROSER2Q86WR7 435 aaPredicted RBP32.01■■■□□ 2.71
PBX4-204ENST00000558276 NWD1Q149M9 1564 aa32■■■□□ 2.71
PBX4-204ENST00000558276 NKTRP30414 1462 aaKnown RBP32■■■□□ 2.71
PBX4-204ENST00000558276 RIMS2Q9UQ26 1411 aa31.99■■■□□ 2.71
PBX4-204ENST00000558276 ZFYVE9O95405 1425 aa31.97■■■□□ 2.71
PBX4-204ENST00000558276 PLEKHG1Q9ULL1 1385 aa31.96■■■□□ 2.71
PBX4-204ENST00000558276 PPARGC1BQ86YN6 1023 aaKnown RBP31.95■■■□□ 2.71
PBX4-204ENST00000558276 CHD2O14647 1828 aaKnown RBP31.93■■■□□ 2.7
PBX4-204ENST00000558276 NUP155O75694 1391 aa31.93■■■□□ 2.7
PBX4-204ENST00000558276 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.92■■■□□ 2.7
PBX4-204ENST00000558276 RBM33Q96EV2 1170 aaKnown RBP31.92■■■□□ 2.7
PBX4-204ENST00000558276 ROBO1Q9Y6N7 1651 aa31.91■■■□□ 2.7
PBX4-204ENST00000558276 MSH6P52701 1360 aa31.91■■■□□ 2.7
PBX4-204ENST00000558276 FAM135BQ49AJ0 1406 aa31.91■■■□□ 2.7
PBX4-204ENST00000558276 DIP2AQ14689 1571 aa31.84■■■□□ 2.69
PBX4-204ENST00000558276 SPHKAPQ2M3C7 1700 aa31.83■■■□□ 2.69
PBX4-204ENST00000558276 NUTM2DQ5VT03 806 aaPredicted RBP31.83■■■□□ 2.69
PBX4-204ENST00000558276 TBX22Q9Y458 520 aa31.82■■■□□ 2.68
PBX4-204ENST00000558276 C14orf37Q86TY3 774 aa31.79■■■□□ 2.68
PBX4-204ENST00000558276 PHLPP1O60346 1717 aa31.76■■■□□ 2.67
PBX4-204ENST00000558276 TRPM2O94759 1503 aa31.75■■■□□ 2.67
PBX4-204ENST00000558276 ADAMTS13Q76LX8 1427 aa31.75■■■□□ 2.67
PBX4-204ENST00000558276 PIK3R4Q99570 1358 aa31.73■■■□□ 2.67
PBX4-204ENST00000558276 SLAIN2Q9P270 581 aa31.73■■■□□ 2.67
PBX4-204ENST00000558276 NCOA3Q9Y6Q9 1424 aa31.72■■■□□ 2.67
PBX4-204ENST00000558276 ZNF326Q5BKZ1 582 aaKnown RBP31.69■■■□□ 2.66
PBX4-204ENST00000558276 RRBP1Q9P2E9 1410 aaKnown RBP31.68■■■□□ 2.66
PBX4-204ENST00000558276 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.67■■■□□ 2.66
PBX4-204ENST00000558276 KIF1BO60333 1816 aa31.65■■■□□ 2.66
PBX4-204ENST00000558276 ATF3P18847 181 aa31.64■■■□□ 2.66
PBX4-204ENST00000558276 CADPS2Q86UW7 1296 aa31.63■■■□□ 2.65
PBX4-204ENST00000558276 CLTCL1P53675 1640 aa31.62■■■□□ 2.65
PBX4-204ENST00000558276 AMOTL2Q9Y2J4 779 aa31.62■■■□□ 2.65
PBX4-204ENST00000558276 NRXN3Q9Y4C0 1643 aa31.61■■■□□ 2.65
PBX4-204ENST00000558276 SETBP1Q9Y6X0 1596 aa31.61■■■□□ 2.65
PBX4-204ENST00000558276 C19orf44Q9H6X5 657 aa31.61■■■□□ 2.65
PBX4-204ENST00000558276 JCADQ9P266 1359 aa31.6■■■□□ 2.65
PBX4-204ENST00000558276 NAIPQ13075 1403 aa31.59■■■□□ 2.65
PBX4-204ENST00000558276 RGS17Q9UGC6 210 aaPredicted RBP31.59■■■□□ 2.65
PBX4-204ENST00000558276 COL16A1Q07092 1604 aaPredicted RBP31.57■■■□□ 2.64
PBX4-204ENST00000558276 XRN1Q8IZH2 1706 aaKnown RBP31.57■■■□□ 2.64
PBX4-204ENST00000558276 PTPRUQ92729 1446 aa31.57■■■□□ 2.64
PBX4-204ENST00000558276 TRIM52Q96A61 297 aa31.55■■■□□ 2.64
PBX4-204ENST00000558276 NEXMIFQ5QGS0 1516 aa31.53■■■□□ 2.64
PBX4-204ENST00000558276 AHDC1Q5TGY3 1603 aaPredicted RBP31.51■■■□□ 2.63
PBX4-204ENST00000558276 DCCP43146 1447 aa31.49■■■□□ 2.63
PBX4-204ENST00000558276 HFM1A2PYH4 1435 aa31.49■■■□□ 2.63
PBX4-204ENST00000558276 METP08581 1390 aa31.46■■■□□ 2.63
PBX4-204ENST00000558276 POTEAQ6S8J7 498 aa31.46■■■□□ 2.63
PBX4-204ENST00000558276 SHPRHQ149N8 1683 aa31.45■■■□□ 2.63
PBX4-204ENST00000558276 MEX3CQ5U5Q3 659 aaKnown RBP31.44■■■□□ 2.62
PBX4-204ENST00000558276 SPATA31A6Q5VVP1 1343 aa31.44■■■□□ 2.62
PBX4-204ENST00000558276 SLC4A1APQ9BWU0 796 aaKnown RBP31.43■■■□□ 2.62
PBX4-204ENST00000558276 BRINP3Q76B58 766 aa31.41■■■□□ 2.62
PBX4-204ENST00000558276 NALCNQ8IZF0 1738 aa31.4■■■□□ 2.62
PBX4-204ENST00000558276 ASXL1Q8IXJ9 1541 aa31.39■■■□□ 2.62
PBX4-204ENST00000558276 VGFO15240 615 aaPredicted RBP31.38■■■□□ 2.61
PBX4-204ENST00000558276 ADGRL3Q9HAR2 1447 aa31.38■■■□□ 2.61
PBX4-204ENST00000558276 MST1RQ04912 1400 aa31.37■■■□□ 2.61
PBX4-204ENST00000558276 LRP6O75581 1613 aa31.36■■■□□ 2.61
PBX4-204ENST00000558276 NHSL1Q5SYE7 1610 aa31.35■■■□□ 2.61
PBX4-204ENST00000558276 PPLO60437 1756 aa31.35■■■□□ 2.61
PBX4-204ENST00000558276 SETD1AO15047 1707 aaKnown RBP31.34■■■□□ 2.61
PBX4-204ENST00000558276 RPGRIP1LQ68CZ1 1315 aa31.32■■■□□ 2.6
PBX4-204ENST00000558276 ZNF772Q68DY9 489 aaPredicted RBP31.29■■■□□ 2.6
PBX4-204ENST00000558276 PTCH1Q13635 1447 aa31.29■■■□□ 2.6
PBX4-204ENST00000558276 NUTM2BA6NNL0 878 aaPredicted RBP31.28■■■□□ 2.6
PBX4-204ENST00000558276 NUTM2EB1AL46 878 aaPredicted RBP31.28■■■□□ 2.6
PBX4-204ENST00000558276 NUTM2AQ8IVF1 878 aaPredicted RBP31.28■■■□□ 2.6
PBX4-204ENST00000558276 SETD5Q9C0A6 1442 aa31.25■■■□□ 2.59
PBX4-204ENST00000558276 LRRC59Q96AG4 307 aaKnown RBP31.24■■■□□ 2.59
PBX4-204ENST00000558276 CCDC144AA2RUR9 1427 aa31.24■■■□□ 2.59
PBX4-204ENST00000558276 FOXD1Q16676 465 aa31.22■■■□□ 2.59
PBX4-204ENST00000558276 ROBO2Q9HCK4 1378 aa31.21■■■□□ 2.59
PBX4-204ENST00000558276 C1orf167Q5SNV9 1468 aa31.2■■■□□ 2.58
PBX4-204ENST00000558276 DDX17Q92841 729 aaKnown RBP31.17■■■□□ 2.58
PBX4-204ENST00000558276 PRAG1Q86YV5 1406 aa31.16■■■□□ 2.58
PBX4-204ENST00000558276 RGL3Q3MIN7 710 aa31.14■■■□□ 2.58
PBX4-204ENST00000558276 IFT172Q9UG01 1749 aa31.14■■■□□ 2.58
PBX4-204ENST00000558276 MPHOSPH9Q99550 1183 aa31.13■■■□□ 2.57
PBX4-204ENST00000558276 PNPLA6Q8IY17 1366 aa31.13■■■□□ 2.57
PBX4-204ENST00000558276 AFF2P51816 1311 aa31.12■■■□□ 2.57
PBX4-204ENST00000558276 LAMC1P11047 1609 aa31.11■■■□□ 2.57
PBX4-204ENST00000558276 RXRBP28702 533 aa31.11■■■□□ 2.57
PBX4-204ENST00000558276 ANKRD30BQ9BXX2 1392 aa31.09■■■□□ 2.57
PBX4-204ENST00000558276 ADGRF5Q8IZF2 1346 aa31.08■■■□□ 2.57
PBX4-204ENST00000558276 C8orf37Q96NL8 207 aa31.08■■■□□ 2.57
PBX4-204ENST00000558276 ORAI2Q96SN7 254 aa31.08■■■□□ 2.57
PBX4-204ENST00000558276 CDC42BPGQ6DT37 1551 aa31.08■■■□□ 2.57
PBX4-204ENST00000558276 SPATA31E1Q6ZUB1 1445 aa31.07■■■□□ 2.56
PBX4-204ENST00000558276 ACIN1Q9UKV3 1341 aaKnown RBP31.06■■■□□ 2.56
PBX4-204ENST00000558276 KNDC1Q76NI1 1749 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms