RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 IQGAP1P46940 1657 aa17.7■□□□□ 0.42
CDK12-203ENST00000558240 RIMS2Q9UQ26 1411 aa17.69■□□□□ 0.42
CDK12-203ENST00000558240 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.68■□□□□ 0.42
CDK12-203ENST00000558240 ANKRD30BQ9BXX2 1392 aa17.67■□□□□ 0.42
CDK12-203ENST00000558240 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
CDK12-203ENST00000558240 PPP1R15AO75807 674 aaPredicted RBP17.63■□□□□ 0.41
CDK12-203ENST00000558240 RPGRIP1LQ68CZ1 1315 aa17.63■□□□□ 0.41
CDK12-203ENST00000558240 PLEKHG1Q9ULL1 1385 aa17.63■□□□□ 0.41
CDK12-203ENST00000558240 SPATA31E1Q6ZUB1 1445 aa17.63■□□□□ 0.41
CDK12-203ENST00000558240 PCGF6Q9BYE7 350 aa17.62■□□□□ 0.41
CDK12-203ENST00000558240 NEXMIFQ5QGS0 1516 aa17.62■□□□□ 0.41
CDK12-203ENST00000558240 PPLO60437 1756 aa17.61■□□□□ 0.41
CDK12-203ENST00000558240 NUTM2DQ5VT03 806 aaPredicted RBP17.6■□□□□ 0.41
CDK12-203ENST00000558240 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.4
CDK12-203ENST00000558240 RGL3Q3MIN7 710 aa17.58■□□□□ 0.4
CDK12-203ENST00000558240 BCANQ96GW7 911 aa17.58■□□□□ 0.4
CDK12-203ENST00000558240 IFT172Q9UG01 1749 aa17.58■□□□□ 0.4
CDK12-203ENST00000558240 DHX57Q6P158 1386 aaKnown RBP17.57■□□□□ 0.4
CDK12-203ENST00000558240 LTBP4Q8N2S1 1624 aa17.57■□□□□ 0.4
CDK12-203ENST00000558240 ZNF335Q9H4Z2 1342 aaPredicted RBP17.56■□□□□ 0.4
CDK12-203ENST00000558240 TBX22Q9Y458 520 aa17.56■□□□□ 0.4
CDK12-203ENST00000558240 SETBP1Q9Y6X0 1596 aa17.55■□□□□ 0.4
CDK12-203ENST00000558240 SLC26A8Q96RN1 970 aa17.55■□□□□ 0.4
CDK12-203ENST00000558240 DIP2AQ14689 1571 aa17.54■□□□□ 0.4
CDK12-203ENST00000558240 ADAMTS13Q76LX8 1427 aa17.54■□□□□ 0.4
CDK12-203ENST00000558240 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
CDK12-203ENST00000558240 STRCP1A6NGW2 1772 aa17.53■□□□□ 0.4
CDK12-203ENST00000558240 CHD2O14647 1828 aaKnown RBP17.53■□□□□ 0.4
CDK12-203ENST00000558240 CPS1P31327 1500 aa17.52■□□□□ 0.39
CDK12-203ENST00000558240 CERKQ8TCT0 537 aa17.51■□□□□ 0.39
CDK12-203ENST00000558240 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
CDK12-203ENST00000558240 PIK3R4Q99570 1358 aa17.51■□□□□ 0.39
CDK12-203ENST00000558240 STAC3Q96MF2 364 aa17.5■□□□□ 0.39
CDK12-203ENST00000558240 KCNA6P17658 529 aa17.49■□□□□ 0.39
CDK12-203ENST00000558240 ADGRF5Q8IZF2 1346 aa17.48■□□□□ 0.39
CDK12-203ENST00000558240 MYOM2P54296 1465 aa17.48■□□□□ 0.39
CDK12-203ENST00000558240 SETD1AO15047 1707 aaKnown RBP17.47■□□□□ 0.39
CDK12-203ENST00000558240 IQSEC2Q5JU85 1478 aa17.47■□□□□ 0.39
CDK12-203ENST00000558240 NWD1Q149M9 1564 aa17.47■□□□□ 0.39
CDK12-203ENST00000558240 ALKQ9UM73 1620 aa17.47■□□□□ 0.39
CDK12-203ENST00000558240 SIN3AQ96ST3 1273 aa17.46■□□□□ 0.39
CDK12-203ENST00000558240 NRXN1Q9ULB1 1477 aa17.45■□□□□ 0.38
CDK12-203ENST00000558240 PIK3C2GO75747 1445 aa17.45■□□□□ 0.38
CDK12-203ENST00000558240 DCAF11Q8TEB1 546 aa17.44■□□□□ 0.38
CDK12-203ENST00000558240 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
CDK12-203ENST00000558240 METP08581 1390 aa17.43■□□□□ 0.38
CDK12-203ENST00000558240 LRRC7Q96NW7 1537 aa17.43■□□□□ 0.38
CDK12-203ENST00000558240 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
CDK12-203ENST00000558240 XIRP1Q702N8 1843 aaKnown RBP17.42■□□□□ 0.38
CDK12-203ENST00000558240 PTPRUQ92729 1446 aa17.41■□□□□ 0.38
CDK12-203ENST00000558240 C14orf93Q9H972 538 aaKnown RBP17.41■□□□□ 0.38
CDK12-203ENST00000558240 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
CDK12-203ENST00000558240 KDM2AQ9Y2K7 1162 aa17.41■□□□□ 0.38
CDK12-203ENST00000558240 LAMC1P11047 1609 aa17.4■□□□□ 0.38
CDK12-203ENST00000558240 PROSER2Q86WR7 435 aaPredicted RBP17.4■□□□□ 0.38
CDK12-203ENST00000558240 XRN1Q8IZH2 1706 aaKnown RBP17.4■□□□□ 0.38
CDK12-203ENST00000558240 L3MBTL2Q969R5 705 aa17.38■□□□□ 0.37
CDK12-203ENST00000558240 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
CDK12-203ENST00000558240 NCOA3Q9Y6Q9 1424 aa17.37■□□□□ 0.37
CDK12-203ENST00000558240 CFAP70Q5T0N1 1121 aa17.36■□□□□ 0.37
CDK12-203ENST00000558240 TMEM94Q12767 1356 aa17.36■□□□□ 0.37
CDK12-203ENST00000558240 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
CDK12-203ENST00000558240 PRAG1Q86YV5 1406 aa17.35■□□□□ 0.37
CDK12-203ENST00000558240 KIAA1210Q9ULL0 1709 aa17.35■□□□□ 0.37
CDK12-203ENST00000558240 TMEM132EQ6IEE7 984 aa17.34■□□□□ 0.37
CDK12-203ENST00000558240 ASXL1Q8IXJ9 1541 aa17.33■□□□□ 0.37
CDK12-203ENST00000558240 KNDC1Q76NI1 1749 aa17.33■□□□□ 0.36
CDK12-203ENST00000558240 PTCH1Q13635 1447 aa17.32■□□□□ 0.36
CDK12-203ENST00000558240 LRPPRCP42704 1394 aaKnown RBP17.32■□□□□ 0.36
CDK12-203ENST00000558240 ABCC11Q96J66 1382 aa17.32■□□□□ 0.36
CDK12-203ENST00000558240 YTHDC2Q9H6S0 1430 aaKnown RBP17.31■□□□□ 0.36
CDK12-203ENST00000558240 TONSLQ96HA7 1378 aa17.31■□□□□ 0.36
CDK12-203ENST00000558240 TOM1O60784 492 aa17.31■□□□□ 0.36
CDK12-203ENST00000558240 RBM33Q96EV2 1170 aaKnown RBP17.31■□□□□ 0.36
CDK12-203ENST00000558240 TECPR2O15040 1411 aa17.3■□□□□ 0.36
CDK12-203ENST00000558240 UBAP1LF5GYI3 381 aa17.3■□□□□ 0.36
CDK12-203ENST00000558240 CCER1Q8TC90 406 aaPredicted RBP17.3■□□□□ 0.36
CDK12-203ENST00000558240 ADGRB1O14514 1584 aa17.3■□□□□ 0.36
CDK12-203ENST00000558240 ROBO2Q9HCK4 1378 aa17.29■□□□□ 0.36
CDK12-203ENST00000558240 SIRT1Q96EB6 747 aa17.29■□□□□ 0.36
CDK12-203ENST00000558240 STK26Q9P289 416 aa17.29■□□□□ 0.36
CDK12-203ENST00000558240 MSH6P52701 1360 aa17.28■□□□□ 0.36
CDK12-203ENST00000558240 C19orf44Q9H6X5 657 aa17.28■□□□□ 0.36
CDK12-203ENST00000558240 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.36
CDK12-203ENST00000558240 C14orf37Q86TY3 774 aa17.27■□□□□ 0.36
CDK12-203ENST00000558240 TIMELESSQ9UNS1 1208 aa17.26■□□□□ 0.35
CDK12-203ENST00000558240 FAM135BQ49AJ0 1406 aa17.25■□□□□ 0.35
CDK12-203ENST00000558240 DLC1Q96QB1 1528 aa17.25■□□□□ 0.35
CDK12-203ENST00000558240 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
CDK12-203ENST00000558240 NALCNQ8IZF0 1738 aa17.24■□□□□ 0.35
CDK12-203ENST00000558240 ADGRL3Q9HAR2 1447 aa17.24■□□□□ 0.35
CDK12-203ENST00000558240 ILDR1Q86SU0 546 aaPredicted RBP17.24■□□□□ 0.35
CDK12-203ENST00000558240 DCCP43146 1447 aa17.23■□□□□ 0.35
CDK12-203ENST00000558240 NBPF1Q3BBV0 1214 aa17.23■□□□□ 0.35
CDK12-203ENST00000558240 CADPS2Q86UW7 1296 aa17.23■□□□□ 0.35
CDK12-203ENST00000558240 ATF3P18847 181 aa17.22■□□□□ 0.35
CDK12-203ENST00000558240 NBPF8Q3BBV2 869 aa17.22■□□□□ 0.35
CDK12-203ENST00000558240 WAPLQ7Z5K2 1190 aa17.22■□□□□ 0.35
CDK12-203ENST00000558240 TRAK1Q9UPV9 953 aa17.22■□□□□ 0.35
CDK12-203ENST00000558240 ARHGEF28Q8N1W1 1705 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms