RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
SEMA4B-204ENST00000558065 U2AF2P26368 475 aaKnown RBP eCLIP13.75□□□□□ -0.21
SEMA4B-204ENST00000558065 BAZ1AQ9NRL2 1556 aaPredicted RBP13.75□□□□□ -0.21
SEMA4B-204ENST00000558065 SETD5Q9C0A6 1442 aa13.75□□□□□ -0.21
SEMA4B-204ENST00000558065 CEP83Q9Y592 693 aa13.75□□□□□ -0.21
SEMA4B-204ENST00000558065 ABCA5Q8WWZ7 1642 aa13.74□□□□□ -0.21
SEMA4B-204ENST00000558065 TBC1D2Q9BYX2 928 aa13.74□□□□□ -0.21
SEMA4B-204ENST00000558065 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
SEMA4B-204ENST00000558065 DDX11L8A8MPP1 907 aa13.74□□□□□ -0.21
SEMA4B-204ENST00000558065 PDLIM2Q96JY6 352 aa13.74□□□□□ -0.21
SEMA4B-204ENST00000558065 WIZO95785 1651 aa13.74□□□□□ -0.21
SEMA4B-204ENST00000558065 C20orf194Q5TEA3 1177 aa13.74□□□□□ -0.21
SEMA4B-204ENST00000558065 MYCBPQ99417 103 aaPredicted RBP13.74□□□□□ -0.21
SEMA4B-204ENST00000558065 SENP3-EIF4A1A0A087X0R7 540 aa13.73□□□□□ -0.21
SEMA4B-204ENST00000558065 KANK4Q5T7N3 995 aaPredicted RBP13.73□□□□□ -0.21
SEMA4B-204ENST00000558065 STK26Q9P289 416 aa13.73□□□□□ -0.21
SEMA4B-204ENST00000558065 SEC24BO95487 1268 aa13.73□□□□□ -0.21
SEMA4B-204ENST00000558065 MPNDQ8N594 471 aa13.73□□□□□ -0.21
SEMA4B-204ENST00000558065 NCAPGQ9BPX3 1015 aa13.73□□□□□ -0.21
SEMA4B-204ENST00000558065 MCM5P33992 734 aa13.72□□□□□ -0.21
SEMA4B-204ENST00000558065 CRBNQ96SW2 442 aa13.72□□□□□ -0.21
SEMA4B-204ENST00000558065 SPINK5Q9NQ38 1064 aaPredicted RBP13.72□□□□□ -0.21
SEMA4B-204ENST00000558065 SATB1Q01826 763 aa13.72□□□□□ -0.21
SEMA4B-204ENST00000558065 HSP90AB3PQ58FF7 597 aa13.72□□□□□ -0.21
SEMA4B-204ENST00000558065 CENPQQ7L2Z9 268 aaPredicted RBP13.72□□□□□ -0.21
SEMA4B-204ENST00000558065 PDCL2Q8N4E4 241 aa13.72□□□□□ -0.21
SEMA4B-204ENST00000558065 CALCOCO1Q9P1Z2 691 aa13.72□□□□□ -0.21
SEMA4B-204ENST00000558065 TPRNQ4KMQ1 711 aa13.71□□□□□ -0.21
SEMA4B-204ENST00000558065 BCL2L12Q9HB09 334 aa13.71□□□□□ -0.21
SEMA4B-204ENST00000558065 SMC4Q9NTJ3 1288 aa13.71□□□□□ -0.21
SEMA4B-204ENST00000558065 HMGN5P82970 282 aaKnown RBP13.71□□□□□ -0.22
SEMA4B-204ENST00000558065 RNF217Q8TC41 542 aa13.71□□□□□ -0.22
SEMA4B-204ENST00000558065 POLR1AO95602 1720 aaPredicted RBP13.7□□□□□ -0.22
SEMA4B-204ENST00000558065 FAM177BA6PVY3 158 aa13.7□□□□□ -0.22
SEMA4B-204ENST00000558065 CCDC172P0C7W6 258 aa13.7□□□□□ -0.22
SEMA4B-204ENST00000558065 FEZ1Q99689 392 aa13.7□□□□□ -0.22
SEMA4B-204ENST00000558065 PRIMPOLQ96LW4 560 aa13.7□□□□□ -0.22
SEMA4B-204ENST00000558065 OGFRQ9NZT2 677 aa13.7□□□□□ -0.22
SEMA4B-204ENST00000558065 CHMP5Q9NZZ3 219 aa13.69□□□□□ -0.22
SEMA4B-204ENST00000558065 PNISRQ8TF01 805 aaKnown RBP13.69□□□□□ -0.22
SEMA4B-204ENST00000558065 ARID3CA6NKF2 412 aa13.69□□□□□ -0.22
SEMA4B-204ENST00000558065 HSPA5P11021 654 aaKnown RBP13.69□□□□□ -0.22
SEMA4B-204ENST00000558065 MFAP1P55081 439 aaKnown RBP13.69□□□□□ -0.22
SEMA4B-204ENST00000558065 ANKRD7Q92527 254 aa13.69□□□□□ -0.22
SEMA4B-204ENST00000558065 CFAP65Q6ZU64 1925 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-204ENST00000558065 TERF2Q15554 542 aa13.68□□□□□ -0.22
SEMA4B-204ENST00000558065 NCOA1Q15788 1441 aa13.68□□□□□ -0.22
SEMA4B-204ENST00000558065 HSP90AB1P08238 724 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-204ENST00000558065 DHX16O60231 1041 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-204ENST00000558065 RBM25P49756 843 aaKnown RBP13.68□□□□□ -0.22
SEMA4B-204ENST00000558065 GTF2A1P52655 376 aaPredicted RBP13.68□□□□□ -0.22
SEMA4B-204ENST00000558065 ZNF692Q9BU19 519 aaPredicted RBP13.68□□□□□ -0.22
SEMA4B-204ENST00000558065 TONSLQ96HA7 1378 aa13.67□□□□□ -0.22
SEMA4B-204ENST00000558065 PLIN1O60240 522 aa13.67□□□□□ -0.22
SEMA4B-204ENST00000558065 IBTKQ9P2D0 1353 aaPredicted RBP13.67□□□□□ -0.22
SEMA4B-204ENST00000558065 RSPH14Q9UHP6 348 aa13.67□□□□□ -0.22
SEMA4B-204ENST00000558065 OS9Q13438 667 aaPredicted RBP13.66□□□□□ -0.22
SEMA4B-204ENST00000558065 CCDC7Q96M83 1385 aa13.66□□□□□ -0.22
SEMA4B-204ENST00000558065 CDCA8Q53HL2 280 aa13.66□□□□□ -0.22
SEMA4B-204ENST00000558065 TRERF1Q96PN7 1200 aa13.66□□□□□ -0.22
SEMA4B-204ENST00000558065 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
SEMA4B-204ENST00000558065 SGSM3Q96HU1 749 aa13.65□□□□□ -0.22
SEMA4B-204ENST00000558065 KIF16BQ96L93 1317 aa13.65□□□□□ -0.22
SEMA4B-204ENST00000558065 GOLIM4O00461 696 aa13.65□□□□□ -0.22
SEMA4B-204ENST00000558065 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.22
SEMA4B-204ENST00000558065 SCAPERQ9BY12 1400 aa13.64□□□□□ -0.23
SEMA4B-204ENST00000558065 ICE2Q659A1 982 aa13.63□□□□□ -0.23
SEMA4B-204ENST00000558065 RAD51AP2Q09MP3 1159 aa13.63□□□□□ -0.23
SEMA4B-204ENST00000558065 RAI14Q9P0K7 980 aa13.63□□□□□ -0.23
SEMA4B-204ENST00000558065 TMX1Q9H3N1 280 aa13.63□□□□□ -0.23
SEMA4B-204ENST00000558065 RGL3Q3MIN7 710 aa13.62□□□□□ -0.23
SEMA4B-204ENST00000558065 TNNT3P45378 269 aaPredicted RBP13.62□□□□□ -0.23
SEMA4B-204ENST00000558065 GUCY2CP25092 1073 aa13.61□□□□□ -0.23
SEMA4B-204ENST00000558065 BORCS6Q96GS4 357 aa13.61□□□□□ -0.23
SEMA4B-204ENST00000558065 DDIT3P35638 169 aa13.61□□□□□ -0.23
SEMA4B-204ENST00000558065 TBC1D32Q96NH3 1257 aa13.61□□□□□ -0.23
SEMA4B-204ENST00000558065 DONSONQ9NYP3 566 aa13.61□□□□□ -0.23
SEMA4B-204ENST00000558065 LRPPRCP42704 1394 aaKnown RBP13.6□□□□□ -0.23
SEMA4B-204ENST00000558065 SKOR2Q2VWA4 1001 aaPredicted RBP13.6□□□□□ -0.23
SEMA4B-204ENST00000558065 NBPF11Q86T75 865 aa13.6□□□□□ -0.23
SEMA4B-204ENST00000558065 PRDM16Q9HAZ2 1276 aa13.6□□□□□ -0.23
SEMA4B-204ENST00000558065 ERICH4A6NGS2 130 aa13.6□□□□□ -0.23
SEMA4B-204ENST00000558065 DNAJC21Q5F1R6 531 aaKnown RBP13.6□□□□□ -0.23
SEMA4B-204ENST00000558065 UPF2Q9HAU5 1272 aaKnown RBP13.6□□□□□ -0.23
SEMA4B-204ENST00000558065 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
SEMA4B-204ENST00000558065 NCOA3Q9Y6Q9 1424 aa13.6□□□□□ -0.23
SEMA4B-204ENST00000558065 CCDC189A1A4V9 331 aa13.59□□□□□ -0.23
SEMA4B-204ENST00000558065 BRMS1Q9HCU9 246 aa13.59□□□□□ -0.23
SEMA4B-204ENST00000558065 CTNNA3Q9UI47 895 aa13.59□□□□□ -0.23
SEMA4B-204ENST00000558065 DDX41Q9UJV9 622 aaKnown RBP13.58□□□□□ -0.23
SEMA4B-204ENST00000558065 RAD50Q92878 1312 aa13.58□□□□□ -0.24
SEMA4B-204ENST00000558065 CTR9Q6PD62 1173 aa13.58□□□□□ -0.24
SEMA4B-204ENST00000558065 DHX29Q7Z478 1369 aaKnown RBP13.58□□□□□ -0.24
SEMA4B-204ENST00000558065 HNRNPH2P55795 449 aaKnown RBP13.57□□□□□ -0.24
SEMA4B-204ENST00000558065 TSGA10IPQ3SY00 556 aa13.57□□□□□ -0.24
SEMA4B-204ENST00000558065 MORC2Q9Y6X9 1032 aaPredicted RBP13.57□□□□□ -0.24
SEMA4B-204ENST00000558065 KIAA2012Q0VF49 1180 aa13.57□□□□□ -0.24
SEMA4B-204ENST00000558065 CCDC39Q9UFE4 941 aa13.57□□□□□ -0.24
SEMA4B-204ENST00000558065 GYS2P54840 703 aa13.57□□□□□ -0.24
SEMA4B-204ENST00000558065 NFATC2IPQ8NCF5 419 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms