RNA–Protein interactions for RNA: ENST00000557947.5

TCF12-208, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-208	ENST00000557947	XIRP1	Q702N8	1843 aa	Known RBP	33.22	■■■□□ 2.91
TCF12-208	ENST00000557947	RIMS2	Q9UQ26	1411 aa		33.21	■■■□□ 2.91
TCF12-208	ENST00000557947	KCNA6	P17658	529 aa		33.19	■■■□□ 2.9
TCF12-208	ENST00000557947	NAIP	Q13075	1403 aa		33.19	■■■□□ 2.9
TCF12-208	ENST00000557947	CHGA	P10645	457 aa	Known RBP	33.17	■■■□□ 2.9
TCF12-208	ENST00000557947	SENP3	Q9H4L4	574 aa	Predicted RBP	33.17	■■■□□ 2.9
TCF12-208	ENST00000557947	PLEKHG1	Q9ULL1	1385 aa		33.17	■■■□□ 2.9
TCF12-208	ENST00000557947	ILDR2	Q71H61	639 aa		33.14	■■■□□ 2.9
TCF12-208	ENST00000557947	NWD1	Q149M9	1564 aa		33.12	■■■□□ 2.89
TCF12-208	ENST00000557947	TMEM94	Q12767	1356 aa		33.11	■■■□□ 2.89
TCF12-208	ENST00000557947	BCAN	Q96GW7	911 aa		33.11	■■■□□ 2.89
TCF12-208	ENST00000557947	HDGF	P51858	240 aa	Known RBP	33.1	■■■□□ 2.89
TCF12-208	ENST00000557947	PPP1R15A	O75807	674 aa	Predicted RBP	33.09	■■■□□ 2.89
TCF12-208	ENST00000557947	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.08	■■■□□ 2.89
TCF12-208	ENST00000557947	RBM33	Q96EV2	1170 aa	Known RBP	33.08	■■■□□ 2.89
TCF12-208	ENST00000557947	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.07	■■■□□ 2.88
TCF12-208	ENST00000557947	SPHKAP	Q2M3C7	1700 aa		33.07	■■■□□ 2.88
TCF12-208	ENST00000557947	PROSER2	Q86WR7	435 aa	Predicted RBP	33.06	■■■□□ 2.88
TCF12-208	ENST00000557947	NKTR	P30414	1462 aa	Known RBP	33.05	■■■□□ 2.88
TCF12-208	ENST00000557947	HFM1	A2PYH4	1435 aa		33.05	■■■□□ 2.88
TCF12-208	ENST00000557947	ADAMTS13	Q76LX8	1427 aa		33.05	■■■□□ 2.88
TCF12-208	ENST00000557947	TBX22	Q9Y458	520 aa		33.04	■■■□□ 2.88
TCF12-208	ENST00000557947	CHD2	O14647	1828 aa	Known RBP	33.02	■■■□□ 2.88
TCF12-208	ENST00000557947	CLTCL1	P53675	1640 aa		32.95	■■■□□ 2.87
TCF12-208	ENST00000557947	MED1	Q15648	1581 aa	Predicted RBP	32.95	■■■□□ 2.86
TCF12-208	ENST00000557947	TRPM2	O94759	1503 aa		32.94	■■■□□ 2.86
TCF12-208	ENST00000557947	FAM135B	Q49AJ0	1406 aa		32.94	■■■□□ 2.86
TCF12-208	ENST00000557947	DIP2A	Q14689	1571 aa		32.93	■■■□□ 2.86
TCF12-208	ENST00000557947	TRIM52	Q96A61	297 aa		32.92	■■■□□ 2.86
TCF12-208	ENST00000557947	NRXN3	Q9Y4C0	1643 aa		32.89	■■■□□ 2.86
TCF12-208	ENST00000557947	PIK3R4	Q99570	1358 aa		32.89	■■■□□ 2.86
TCF12-208	ENST00000557947	PTPRU	Q92729	1446 aa		32.88	■■■□□ 2.85
TCF12-208	ENST00000557947	ZNF326	Q5BKZ1	582 aa	Known RBP	32.87	■■■□□ 2.85
TCF12-208	ENST00000557947	MSH6	P52701	1360 aa		32.86	■■■□□ 2.85
TCF12-208	ENST00000557947	SETBP1	Q9Y6X0	1596 aa		32.85	■■■□□ 2.85
TCF12-208	ENST00000557947	NEXMIF	Q5QGS0	1516 aa		32.84	■■■□□ 2.85
TCF12-208	ENST00000557947	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.84	■■■□□ 2.85
TCF12-208	ENST00000557947	ROBO1	Q9Y6N7	1651 aa		32.83	■■■□□ 2.85
TCF12-208	ENST00000557947	AMOTL2	Q9Y2J4	779 aa		32.82	■■■□□ 2.84
TCF12-208	ENST00000557947	NCOA3	Q9Y6Q9	1424 aa		32.82	■■■□□ 2.84
TCF12-208	ENST00000557947	SOCS7	O14512	581 aa		32.79	■■■□□ 2.84
TCF12-208	ENST00000557947	SLAIN2	Q9P270	581 aa		32.79	■■■□□ 2.84
TCF12-208	ENST00000557947	KIF1B	O60333	1816 aa		32.79	■■■□□ 2.84
TCF12-208	ENST00000557947	MET	P08581	1390 aa		32.76	■■■□□ 2.83
TCF12-208	ENST00000557947	XRN1	Q8IZH2	1706 aa	Known RBP	32.75	■■■□□ 2.83
TCF12-208	ENST00000557947	FOXD1	Q16676	465 aa		32.75	■■■□□ 2.83
TCF12-208	ENST00000557947	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.72	■■■□□ 2.83
TCF12-208	ENST00000557947	C19orf44	Q9H6X5	657 aa		32.71	■■■□□ 2.83
TCF12-208	ENST00000557947	C14orf37	Q86TY3	774 aa		32.7	■■■□□ 2.83
TCF12-208	ENST00000557947	MPHOSPH9	Q99550	1183 aa		32.66	■■■□□ 2.82
TCF12-208	ENST00000557947	CADPS2	Q86UW7	1296 aa		32.65	■■■□□ 2.82
TCF12-208	ENST00000557947	RPGRIP1L	Q68CZ1	1315 aa		32.63	■■■□□ 2.81
TCF12-208	ENST00000557947	VGF	O15240	615 aa	Predicted RBP	32.63	■■■□□ 2.81
TCF12-208	ENST00000557947	PHF23	Q9BUL5	403 aa	Predicted RBP	32.63	■■■□□ 2.81
TCF12-208	ENST00000557947	ATF3	P18847	181 aa		32.62	■■■□□ 2.81
TCF12-208	ENST00000557947	SETD1A	O15047	1707 aa	Known RBP	32.62	■■■□□ 2.81
TCF12-208	ENST00000557947	PHLPP1	O60346	1717 aa		32.61	■■■□□ 2.81
TCF12-208	ENST00000557947	PPL	O60437	1756 aa		32.6	■■■□□ 2.81
TCF12-208	ENST00000557947	RGS17	Q9UGC6	210 aa	Predicted RBP	32.59	■■■□□ 2.81
TCF12-208	ENST00000557947	DCC	P43146	1447 aa		32.58	■■■□□ 2.81
TCF12-208	ENST00000557947	SETD5	Q9C0A6	1442 aa		32.58	■■■□□ 2.81
TCF12-208	ENST00000557947	COL16A1	Q07092	1604 aa	Predicted RBP	32.57	■■■□□ 2.8
TCF12-208	ENST00000557947	CCDC144A	A2RUR9	1427 aa		32.56	■■■□□ 2.8
TCF12-208	ENST00000557947	SPATA31E1	Q6ZUB1	1445 aa		32.55	■■■□□ 2.8
TCF12-208	ENST00000557947	BRINP3	Q76B58	766 aa		32.52	■■■□□ 2.8
TCF12-208	ENST00000557947	MST1R	Q04912	1400 aa		32.51	■■■□□ 2.8
TCF12-208	ENST00000557947	ADGRL3	Q9HAR2	1447 aa		32.51	■■■□□ 2.8
TCF12-208	ENST00000557947	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.51	■■■□□ 2.8
TCF12-208	ENST00000557947	JCAD	Q9P266	1359 aa		32.5	■■■□□ 2.79
TCF12-208	ENST00000557947	ADGRF5	Q8IZF2	1346 aa		32.5	■■■□□ 2.79
TCF12-208	ENST00000557947	NALCN	Q8IZF0	1738 aa		32.49	■■■□□ 2.79
TCF12-208	ENST00000557947	ROBO2	Q9HCK4	1378 aa		32.49	■■■□□ 2.79
TCF12-208	ENST00000557947	RGL3	Q3MIN7	710 aa		32.49	■■■□□ 2.79
TCF12-208	ENST00000557947	PTCH1	Q13635	1447 aa		32.48	■■■□□ 2.79
TCF12-208	ENST00000557947	PRAG1	Q86YV5	1406 aa		32.48	■■■□□ 2.79
TCF12-208	ENST00000557947	RAB3GAP2	Q9H2M9	1393 aa		32.47	■■■□□ 2.79
TCF12-208	ENST00000557947	IFT172	Q9UG01	1749 aa		32.45	■■■□□ 2.78
TCF12-208	ENST00000557947	ACIN1	Q9UKV3	1341 aa	Known RBP	32.45	■■■□□ 2.78
TCF12-208	ENST00000557947	ASXL1	Q8IXJ9	1541 aa		32.43	■■■□□ 2.78
TCF12-208	ENST00000557947	ANKRD30B	Q9BXX2	1392 aa		32.41	■■■□□ 2.78
TCF12-208	ENST00000557947	POTEA	Q6S8J7	498 aa		32.38	■■■□□ 2.77
TCF12-208	ENST00000557947	LRP6	O75581	1613 aa		32.37	■■■□□ 2.77
TCF12-208	ENST00000557947	NHSL1	Q5SYE7	1610 aa		32.36	■■■□□ 2.77
TCF12-208	ENST00000557947	SHPRH	Q149N8	1683 aa		32.35	■■■□□ 2.77
TCF12-208	ENST00000557947	C1orf167	Q5SNV9	1468 aa		32.35	■■■□□ 2.77
TCF12-208	ENST00000557947	SPATA31A6	Q5VVP1	1343 aa		32.34	■■■□□ 2.77
TCF12-208	ENST00000557947	DDX17	Q92841	729 aa	Known RBP	32.34	■■■□□ 2.77
TCF12-208	ENST00000557947	PIK3C2G	O75747	1445 aa		32.34	■■■□□ 2.77
TCF12-208	ENST00000557947	TECPR2	O15040	1411 aa		32.29	■■■□□ 2.76
TCF12-208	ENST00000557947	TMEM132E	Q6IEE7	984 aa		32.29	■■■□□ 2.76
TCF12-208	ENST00000557947	LRPPRC	P42704	1394 aa	Known RBP	32.29	■■■□□ 2.76
TCF12-208	ENST00000557947	STK26	Q9P289	416 aa		32.28	■■■□□ 2.76
TCF12-208	ENST00000557947	ORAI2	Q96SN7	254 aa		32.27	■■■□□ 2.76
TCF12-208	ENST00000557947	ABCC11	Q96J66	1382 aa		32.26	■■■□□ 2.75
TCF12-208	ENST00000557947	NRXN1	Q9ULB1	1477 aa		32.26	■■■□□ 2.75
TCF12-208	ENST00000557947	WAPL	Q7Z5K2	1190 aa		32.25	■■■□□ 2.75
TCF12-208	ENST00000557947	MYOM2	P54296	1465 aa		32.23	■■■□□ 2.75
TCF12-208	ENST00000557947	LAMC1	P11047	1609 aa		32.22	■■■□□ 2.75
TCF12-208	ENST00000557947	PLEKHH1	Q9ULM0	1364 aa		32.22	■■■□□ 2.75
TCF12-208	ENST00000557947	HRC	P23327	699 aa		32.22	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 168 ms