RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 NCKAP5LQ9HCH0 1330 aa22.17■■□□□ 1.14
NEDD1-213ENST00000557644 TXNDC2Q86VQ3 553 aa22.17■■□□□ 1.14
NEDD1-213ENST00000557644 SENP3Q9H4L4 574 aaPredicted RBP22.17■■□□□ 1.14
NEDD1-213ENST00000557644 ANKLE2Q86XL3 938 aa22.16■■□□□ 1.14
NEDD1-213ENST00000557644 NEURL4Q96JN8 1562 aa22.16■■□□□ 1.14
NEDD1-213ENST00000557644 NEXMIFQ5QGS0 1516 aa22.15■■□□□ 1.14
NEDD1-213ENST00000557644 EID1Q9Y6B2 187 aa22.14■■□□□ 1.14
NEDD1-213ENST00000557644 SCAF11Q99590 1463 aaKnown RBP22.13■■□□□ 1.13
NEDD1-213ENST00000557644 RPGRIP1LQ68CZ1 1315 aa22.13■■□□□ 1.13
NEDD1-213ENST00000557644 PPP1R15AO75807 674 aaPredicted RBP22.12■■□□□ 1.13
NEDD1-213ENST00000557644 DCAF11Q8TEB1 546 aa22.12■■□□□ 1.13
NEDD1-213ENST00000557644 L3MBTL2Q969R5 705 aa22.12■■□□□ 1.13
NEDD1-213ENST00000557644 KDM2AQ9Y2K7 1162 aa22.11■■□□□ 1.13
NEDD1-213ENST00000557644 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.11■■□□□ 1.13
NEDD1-213ENST00000557644 HDGFP51858 240 aaKnown RBP22.1■■□□□ 1.13
NEDD1-213ENST00000557644 STRCQ7RTU9 1775 aa22.1■■□□□ 1.13
NEDD1-213ENST00000557644 ADGRF5Q8IZF2 1346 aa22.09■■□□□ 1.13
NEDD1-213ENST00000557644 PPLO60437 1756 aa22.09■■□□□ 1.13
NEDD1-213ENST00000557644 TONSLQ96HA7 1378 aa22.08■■□□□ 1.13
NEDD1-213ENST00000557644 VGFO15240 615 aaPredicted RBP22.07■■□□□ 1.12
NEDD1-213ENST00000557644 IFT172Q9UG01 1749 aa22.07■■□□□ 1.12
NEDD1-213ENST00000557644 POLR1AO95602 1720 aaPredicted RBP22.06■■□□□ 1.12
NEDD1-213ENST00000557644 BCANQ96GW7 911 aa22.05■■□□□ 1.12
NEDD1-213ENST00000557644 NPHP4O75161 1426 aaPredicted RBP22.05■■□□□ 1.12
NEDD1-213ENST00000557644 PLEKHG1Q9ULL1 1385 aa22.04■■□□□ 1.12
NEDD1-213ENST00000557644 MED14O60244 1454 aa22.04■■□□□ 1.12
NEDD1-213ENST00000557644 SLC26A8Q96RN1 970 aa22.03■■□□□ 1.12
NEDD1-213ENST00000557644 MYOM2P54296 1465 aa22.02■■□□□ 1.12
NEDD1-213ENST00000557644 IQGAP1P46940 1657 aa22■■□□□ 1.11
NEDD1-213ENST00000557644 NRXN1Q9ULB1 1477 aa22■■□□□ 1.11
NEDD1-213ENST00000557644 PIK3C2GO75747 1445 aa21.99■■□□□ 1.11
NEDD1-213ENST00000557644 ADAMTS13Q76LX8 1427 aa21.98■■□□□ 1.11
NEDD1-213ENST00000557644 NRXN3Q9Y4C0 1643 aa21.98■■□□□ 1.11
NEDD1-213ENST00000557644 STAC3Q96MF2 364 aa21.97■■□□□ 1.11
NEDD1-213ENST00000557644 SETBP1Q9Y6X0 1596 aa21.97■■□□□ 1.11
NEDD1-213ENST00000557644 TIMELESSQ9UNS1 1208 aa21.96■■□□□ 1.11
NEDD1-213ENST00000557644 DMRT2Q9Y5R5 561 aa21.96■■□□□ 1.11
NEDD1-213ENST00000557644 PRAG1Q86YV5 1406 aa21.96■■□□□ 1.11
NEDD1-213ENST00000557644 CFAP70Q5T0N1 1121 aa21.95■■□□□ 1.1
NEDD1-213ENST00000557644 NBPF8Q3BBV2 869 aa21.95■■□□□ 1.1
NEDD1-213ENST00000557644 ALKQ9UM73 1620 aa21.93■■□□□ 1.1
NEDD1-213ENST00000557644 C14orf93Q9H972 538 aaKnown RBP21.92■■□□□ 1.1
NEDD1-213ENST00000557644 TBX22Q9Y458 520 aa21.92■■□□□ 1.1
NEDD1-213ENST00000557644 METP08581 1390 aa21.92■■□□□ 1.1
NEDD1-213ENST00000557644 TMEM132EQ6IEE7 984 aa21.9■■□□□ 1.1
NEDD1-213ENST00000557644 NBPF1Q3BBV0 1214 aa21.88■■□□□ 1.09
NEDD1-213ENST00000557644 SETD1AO15047 1707 aaKnown RBP21.88■■□□□ 1.09
NEDD1-213ENST00000557644 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
NEDD1-213ENST00000557644 ZNF335Q9H4Z2 1342 aaPredicted RBP21.87■■□□□ 1.09
NEDD1-213ENST00000557644 ASXL1Q8IXJ9 1541 aa21.86■■□□□ 1.09
NEDD1-213ENST00000557644 PTPRUQ92729 1446 aa21.86■■□□□ 1.09
NEDD1-213ENST00000557644 ADGRB1O14514 1584 aa21.82■■□□□ 1.08
NEDD1-213ENST00000557644 LAMC1P11047 1609 aa21.82■■□□□ 1.08
NEDD1-213ENST00000557644 STK26Q9P289 416 aa21.82■■□□□ 1.08
NEDD1-213ENST00000557644 AMOTL2Q9Y2J4 779 aa21.82■■□□□ 1.08
NEDD1-213ENST00000557644 TRPM1Q7Z4N2 1603 aa21.81■■□□□ 1.08
NEDD1-213ENST00000557644 PIK3R4Q99570 1358 aa21.81■■□□□ 1.08
NEDD1-213ENST00000557644 KCNA6P17658 529 aa21.81■■□□□ 1.08
NEDD1-213ENST00000557644 ROCK2O75116 1388 aaKnown RBP21.8■■□□□ 1.08
NEDD1-213ENST00000557644 KIAA1210Q9ULL0 1709 aa21.79■■□□□ 1.08
NEDD1-213ENST00000557644 YTHDC2Q9H6S0 1430 aaKnown RBP21.79■■□□□ 1.08
NEDD1-213ENST00000557644 STRCP1A6NGW2 1772 aa21.78■■□□□ 1.08
NEDD1-213ENST00000557644 RALGAPBQ86X10 1494 aa21.78■■□□□ 1.08
NEDD1-213ENST00000557644 CHD2O14647 1828 aaKnown RBP21.78■■□□□ 1.08
NEDD1-213ENST00000557644 LRPPRCP42704 1394 aaKnown RBP21.77■■□□□ 1.08
NEDD1-213ENST00000557644 RBM33Q96EV2 1170 aaKnown RBP21.76■■□□□ 1.07
NEDD1-213ENST00000557644 TRAK1Q9UPV9 953 aa21.76■■□□□ 1.07
NEDD1-213ENST00000557644 NWD1Q149M9 1564 aa21.75■■□□□ 1.07
NEDD1-213ENST00000557644 XRN1Q8IZH2 1706 aaKnown RBP21.74■■□□□ 1.07
NEDD1-213ENST00000557644 CARD11Q9BXL7 1154 aa21.74■■□□□ 1.07
NEDD1-213ENST00000557644 GPRASP1Q5JY77 1395 aa21.74■■□□□ 1.07
NEDD1-213ENST00000557644 ABCC11Q96J66 1382 aa21.74■■□□□ 1.07
NEDD1-213ENST00000557644 ROBO2Q9HCK4 1378 aa21.74■■□□□ 1.07
NEDD1-213ENST00000557644 LTBP4Q8N2S1 1624 aa21.72■■□□□ 1.07
NEDD1-213ENST00000557644 TECPR2O15040 1411 aa21.71■■□□□ 1.07
NEDD1-213ENST00000557644 WAPLQ7Z5K2 1190 aa21.71■■□□□ 1.07
NEDD1-213ENST00000557644 PROSER2Q86WR7 435 aaPredicted RBP21.71■■□□□ 1.07
NEDD1-213ENST00000557644 NKTRP30414 1462 aaKnown RBP21.7■■□□□ 1.06
NEDD1-213ENST00000557644 PLEKHH1Q9ULM0 1364 aa21.69■■□□□ 1.06
NEDD1-213ENST00000557644 PTCH1Q13635 1447 aa21.69■■□□□ 1.06
NEDD1-213ENST00000557644 SAFB2Q14151 953 aaKnown RBP eCLIP21.68■■□□□ 1.06
NEDD1-213ENST00000557644 PRAM1Q96QH2 718 aa21.68■■□□□ 1.06
NEDD1-213ENST00000557644 LRRC7Q96NW7 1537 aa21.68■■□□□ 1.06
NEDD1-213ENST00000557644 CPS1P31327 1500 aa21.67■■□□□ 1.06
NEDD1-213ENST00000557644 TMEM94Q12767 1356 aa21.67■■□□□ 1.06
NEDD1-213ENST00000557644 ZEB1P37275 1124 aaPredicted RBP21.67■■□□□ 1.06
NEDD1-213ENST00000557644 KNDC1Q76NI1 1749 aa21.67■■□□□ 1.06
NEDD1-213ENST00000557644 DLC1Q96QB1 1528 aa21.65■■□□□ 1.06
NEDD1-213ENST00000557644 POGKQ9P215 609 aa21.65■■□□□ 1.06
NEDD1-213ENST00000557644 SIRT1Q96EB6 747 aa21.64■■□□□ 1.05
NEDD1-213ENST00000557644 FAM135BQ49AJ0 1406 aa21.64■■□□□ 1.05
NEDD1-213ENST00000557644 ARHGEF28Q8N1W1 1705 aaKnown RBP21.64■■□□□ 1.05
NEDD1-213ENST00000557644 USP47Q96K76 1375 aa21.61■■□□□ 1.05
NEDD1-213ENST00000557644 C14orf37Q86TY3 774 aa21.61■■□□□ 1.05
NEDD1-213ENST00000557644 CENPJQ9HC77 1338 aaPredicted RBP21.6■■□□□ 1.05
NEDD1-213ENST00000557644 XIRP1Q702N8 1843 aaKnown RBP21.6■■□□□ 1.05
NEDD1-213ENST00000557644 HIRIP3Q9BW71 556 aaPredicted RBP21.59■■□□□ 1.05
NEDD1-213ENST00000557644 MINK1Q8N4C8 1332 aaPredicted RBP21.59■■□□□ 1.05
NEDD1-213ENST00000557644 ST20-MTHFSA0A0A6YYL1 179 aa21.59■■□□□ 1.05
NEDD1-213ENST00000557644 EIF3AQ14152 1382 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms