RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 HFM1A2PYH4 1435 aa15.6■□□□□ 0.09
PRKCH-227ENST00000557599 NKTRP30414 1462 aaKnown RBP15.59■□□□□ 0.09
PRKCH-227ENST00000557599 TXNDC2Q86VQ3 553 aa15.58■□□□□ 0.08
PRKCH-227ENST00000557599 CHD2O14647 1828 aaKnown RBP15.57■□□□□ 0.08
PRKCH-227ENST00000557599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.57■□□□□ 0.08
PRKCH-227ENST00000557599 HRCP23327 699 aa15.56■□□□□ 0.08
PRKCH-227ENST00000557599 RAB3GAP2Q9H2M9 1393 aa15.55■□□□□ 0.08
PRKCH-227ENST00000557599 SLC52A1Q9NWF4 448 aa15.55■□□□□ 0.08
PRKCH-227ENST00000557599 NAIPQ13075 1403 aa15.54■□□□□ 0.08
PRKCH-227ENST00000557599 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
PRKCH-227ENST00000557599 PIP4K2BP78356 416 aa15.53■□□□□ 0.08
PRKCH-227ENST00000557599 EID1Q9Y6B2 187 aa15.53■□□□□ 0.08
PRKCH-227ENST00000557599 DIP2AQ14689 1571 aa15.53■□□□□ 0.08
PRKCH-227ENST00000557599 FAM135BQ49AJ0 1406 aa15.51■□□□□ 0.07
PRKCH-227ENST00000557599 PLEKHG1Q9ULL1 1385 aa15.51■□□□□ 0.07
PRKCH-227ENST00000557599 ROBO1Q9Y6N7 1651 aa15.51■□□□□ 0.07
PRKCH-227ENST00000557599 TMEM94Q12767 1356 aa15.5■□□□□ 0.07
PRKCH-227ENST00000557599 SPHKAPQ2M3C7 1700 aa15.49■□□□□ 0.07
PRKCH-227ENST00000557599 KCNA6P17658 529 aa15.49■□□□□ 0.07
PRKCH-227ENST00000557599 NRXN3Q9Y4C0 1643 aa15.49■□□□□ 0.07
PRKCH-227ENST00000557599 ADAMTS13Q76LX8 1427 aa15.48■□□□□ 0.07
PRKCH-227ENST00000557599 RIMS2Q9UQ26 1411 aa15.48■□□□□ 0.07
PRKCH-227ENST00000557599 TRIM52Q96A61 297 aa15.47■□□□□ 0.07
PRKCH-227ENST00000557599 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
PRKCH-227ENST00000557599 NCOA3Q9Y6Q9 1424 aa15.45■□□□□ 0.06
PRKCH-227ENST00000557599 XRN1Q8IZH2 1706 aaKnown RBP15.45■□□□□ 0.06
PRKCH-227ENST00000557599 SETBP1Q9Y6X0 1596 aa15.45■□□□□ 0.06
PRKCH-227ENST00000557599 ZEB1P37275 1124 aaPredicted RBP15.44■□□□□ 0.06
PRKCH-227ENST00000557599 SLC26A8Q96RN1 970 aa15.44■□□□□ 0.06
PRKCH-227ENST00000557599 STAG3Q9UJ98 1225 aa15.44■□□□□ 0.06
PRKCH-227ENST00000557599 PIK3R4Q99570 1358 aa15.43■□□□□ 0.06
PRKCH-227ENST00000557599 CLSPNQ9HAW4 1339 aa15.43■□□□□ 0.06
PRKCH-227ENST00000557599 COL16A1Q07092 1604 aaPredicted RBP15.42■□□□□ 0.06
PRKCH-227ENST00000557599 TRPM2O94759 1503 aa15.42■□□□□ 0.06
PRKCH-227ENST00000557599 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.41■□□□□ 0.06
PRKCH-227ENST00000557599 TBX22Q9Y458 520 aa15.41■□□□□ 0.06
PRKCH-227ENST00000557599 CLTCL1P53675 1640 aa15.4■□□□□ 0.06
PRKCH-227ENST00000557599 DHX57Q6P158 1386 aaKnown RBP15.4■□□□□ 0.06
PRKCH-227ENST00000557599 NUP155O75694 1391 aa15.39■□□□□ 0.05
PRKCH-227ENST00000557599 NEXMIFQ5QGS0 1516 aa15.39■□□□□ 0.05
PRKCH-227ENST00000557599 SETD1AO15047 1707 aaKnown RBP15.39■□□□□ 0.05
PRKCH-227ENST00000557599 PHLPP1O60346 1717 aa15.39■□□□□ 0.05
PRKCH-227ENST00000557599 AHDC1Q5TGY3 1603 aaPredicted RBP15.38■□□□□ 0.05
PRKCH-227ENST00000557599 PTPRUQ92729 1446 aa15.37■□□□□ 0.05
PRKCH-227ENST00000557599 RGS17Q9UGC6 210 aaPredicted RBP15.37■□□□□ 0.05
PRKCH-227ENST00000557599 MSH6P52701 1360 aa15.36■□□□□ 0.05
PRKCH-227ENST00000557599 PROSER2Q86WR7 435 aaPredicted RBP15.36■□□□□ 0.05
PRKCH-227ENST00000557599 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.36■□□□□ 0.05
PRKCH-227ENST00000557599 SLC4A1APQ9BWU0 796 aaKnown RBP15.35■□□□□ 0.05
PRKCH-227ENST00000557599 SHPRHQ149N8 1683 aa15.35■□□□□ 0.05
PRKCH-227ENST00000557599 HDGFP51858 240 aaKnown RBP15.34■□□□□ 0.05
PRKCH-227ENST00000557599 RBM33Q96EV2 1170 aaKnown RBP15.34■□□□□ 0.05
PRKCH-227ENST00000557599 DCCP43146 1447 aa15.34■□□□□ 0.05
PRKCH-227ENST00000557599 PRAG1Q86YV5 1406 aa15.34■□□□□ 0.05
PRKCH-227ENST00000557599 MPHOSPH9Q99550 1183 aa15.33■□□□□ 0.04
PRKCH-227ENST00000557599 KIF1BO60333 1816 aa15.33■□□□□ 0.04
PRKCH-227ENST00000557599 NHSL1Q5SYE7 1610 aa15.32■□□□□ 0.04
PRKCH-227ENST00000557599 NALCNQ8IZF0 1738 aa15.31■□□□□ 0.04
PRKCH-227ENST00000557599 SLAIN2Q9P270 581 aa15.31■□□□□ 0.04
PRKCH-227ENST00000557599 PPP1R15AO75807 674 aaPredicted RBP15.3■□□□□ 0.04
PRKCH-227ENST00000557599 LAMC1P11047 1609 aa15.3■□□□□ 0.04
PRKCH-227ENST00000557599 PPLO60437 1756 aa15.29■□□□□ 0.04
PRKCH-227ENST00000557599 LRP6O75581 1613 aa15.28■□□□□ 0.04
PRKCH-227ENST00000557599 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
PRKCH-227ENST00000557599 JCADQ9P266 1359 aa15.27■□□□□ 0.04
PRKCH-227ENST00000557599 MST1RQ04912 1400 aa15.26■□□□□ 0.03
PRKCH-227ENST00000557599 IFT172Q9UG01 1749 aa15.26■□□□□ 0.03
PRKCH-227ENST00000557599 METP08581 1390 aa15.26■□□□□ 0.03
PRKCH-227ENST00000557599 C19orf44Q9H6X5 657 aa15.26■□□□□ 0.03
PRKCH-227ENST00000557599 ASXL1Q8IXJ9 1541 aa15.26■□□□□ 0.03
PRKCH-227ENST00000557599 NUTM2DQ5VT03 806 aaPredicted RBP15.25■□□□□ 0.03
PRKCH-227ENST00000557599 SENP3Q9H4L4 574 aaPredicted RBP15.25■□□□□ 0.03
PRKCH-227ENST00000557599 PTCH1Q13635 1447 aa15.25■□□□□ 0.03
PRKCH-227ENST00000557599 CHGAP10645 457 aaKnown RBP15.24■□□□□ 0.03
PRKCH-227ENST00000557599 CADPS2Q86UW7 1296 aa15.24■□□□□ 0.03
PRKCH-227ENST00000557599 BCANQ96GW7 911 aa15.24■□□□□ 0.03
PRKCH-227ENST00000557599 AMOTL2Q9Y2J4 779 aa15.24■□□□□ 0.03
PRKCH-227ENST00000557599 ADGRL3Q9HAR2 1447 aa15.24■□□□□ 0.03
PRKCH-227ENST00000557599 POTEAQ6S8J7 498 aa15.22■□□□□ 0.03
PRKCH-227ENST00000557599 SPATA31A6Q5VVP1 1343 aa15.2■□□□□ 0.02
PRKCH-227ENST00000557599 NEUROD1Q13562 356 aa15.2■□□□□ 0.02
PRKCH-227ENST00000557599 BRINP3Q76B58 766 aa15.19■□□□□ 0.02
PRKCH-227ENST00000557599 TIMELESSQ9UNS1 1208 aa15.19■□□□□ 0.02
PRKCH-227ENST00000557599 TONSLQ96HA7 1378 aa15.18■□□□□ 0.02
PRKCH-227ENST00000557599 ANKRD30BQ9BXX2 1392 aa15.18■□□□□ 0.02
PRKCH-227ENST00000557599 KNDC1Q76NI1 1749 aa15.17■□□□□ 0.02
PRKCH-227ENST00000557599 FOXD1Q16676 465 aa15.17■□□□□ 0.02
PRKCH-227ENST00000557599 SPATA31E1Q6ZUB1 1445 aa15.17■□□□□ 0.02
PRKCH-227ENST00000557599 CDC42BPGQ6DT37 1551 aa15.16■□□□□ 0.02
PRKCH-227ENST00000557599 ATF3P18847 181 aa15.16■□□□□ 0.02
PRKCH-227ENST00000557599 ROBO2Q9HCK4 1378 aa15.15■□□□□ 0.02
PRKCH-227ENST00000557599 CCDC144AA2RUR9 1427 aa15.15■□□□□ 0.02
PRKCH-227ENST00000557599 RPGRIP1LQ68CZ1 1315 aa15.15■□□□□ 0.02
PRKCH-227ENST00000557599 COL22A1Q8NFW1 1626 aaPredicted RBP15.14■□□□□ 0.01
PRKCH-227ENST00000557599 SIN3AQ96ST3 1273 aa15.14■□□□□ 0.01
PRKCH-227ENST00000557599 TECPR2O15040 1411 aa15.14■□□□□ 0.01
PRKCH-227ENST00000557599 C1orf167Q5SNV9 1468 aa15.14■□□□□ 0.01
PRKCH-227ENST00000557599 ZNF326Q5BKZ1 582 aaKnown RBP15.13■□□□□ 0.01
PRKCH-227ENST00000557599 CDK12Q9NYV4 1490 aaPredicted RBP15.12■□□□□ 0.01
PRKCH-227ENST00000557599 C14orf37Q86TY3 774 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms