RNA–Protein interactions for RNA: ENST00000557317.1

CGRRF1-206, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 2

Gene CGRRF1, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-206ENST00000557317 TMEM131LA2VDJ0 1609 aa23.28■■□□□ 1.32
CGRRF1-206ENST00000557317 PHF23Q9BUL5 403 aaPredicted RBP23.27■■□□□ 1.32
CGRRF1-206ENST00000557317 SLC26A8Q96RN1 970 aa23.26■■□□□ 1.31
CGRRF1-206ENST00000557317 SENP3Q9H4L4 574 aaPredicted RBP23.26■■□□□ 1.31
CGRRF1-206ENST00000557317 ROBO1Q9Y6N7 1651 aa23.25■■□□□ 1.31
CGRRF1-206ENST00000557317 CHD2O14647 1828 aaKnown RBP23.25■■□□□ 1.31
CGRRF1-206ENST00000557317 E9PCH4 1651 aa23.25■■□□□ 1.31
CGRRF1-206ENST00000557317 IQGAP3Q86VI3 1631 aa23.23■■□□□ 1.31
CGRRF1-206ENST00000557317 PLEKHG1Q9ULL1 1385 aa23.23■■□□□ 1.31
CGRRF1-206ENST00000557317 ROCK1Q13464 1354 aa23.22■■□□□ 1.31
CGRRF1-206ENST00000557317 RIMS2Q9UQ26 1411 aa23.2■■□□□ 1.3
CGRRF1-206ENST00000557317 PROSER2Q86WR7 435 aaPredicted RBP23.2■■□□□ 1.3
CGRRF1-206ENST00000557317 DIP2AQ14689 1571 aa23.15■■□□□ 1.3
CGRRF1-206ENST00000557317 RBM33Q96EV2 1170 aaKnown RBP23.15■■□□□ 1.3
CGRRF1-206ENST00000557317 MSH6P52701 1360 aa23.14■■□□□ 1.3
CGRRF1-206ENST00000557317 HDGFP51858 240 aaKnown RBP23.14■■□□□ 1.29
CGRRF1-206ENST00000557317 BCANQ96GW7 911 aa23.14■■□□□ 1.29
CGRRF1-206ENST00000557317 RGS17Q9UGC6 210 aaPredicted RBP23.13■■□□□ 1.29
CGRRF1-206ENST00000557317 PPP1R15AO75807 674 aaPredicted RBP23.12■■□□□ 1.29
CGRRF1-206ENST00000557317 ADAMTS13Q76LX8 1427 aa23.11■■□□□ 1.29
CGRRF1-206ENST00000557317 TBX22Q9Y458 520 aa23.11■■□□□ 1.29
CGRRF1-206ENST00000557317 PHLPP1O60346 1717 aa23.11■■□□□ 1.29
CGRRF1-206ENST00000557317 NCOA3Q9Y6Q9 1424 aa23.1■■□□□ 1.29
CGRRF1-206ENST00000557317 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.1■■□□□ 1.29
CGRRF1-206ENST00000557317 PIK3R4Q99570 1358 aa23.08■■□□□ 1.29
CGRRF1-206ENST00000557317 NUP155O75694 1391 aa23.07■■□□□ 1.28
CGRRF1-206ENST00000557317 SLAIN2Q9P270 581 aa23.07■■□□□ 1.28
CGRRF1-206ENST00000557317 SPHKAPQ2M3C7 1700 aa23.06■■□□□ 1.28
CGRRF1-206ENST00000557317 COL16A1Q07092 1604 aaPredicted RBP23.05■■□□□ 1.28
CGRRF1-206ENST00000557317 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.05■■□□□ 1.28
CGRRF1-206ENST00000557317 TRPM2O94759 1503 aa23.04■■□□□ 1.28
CGRRF1-206ENST00000557317 CHGAP10645 457 aaKnown RBP23.04■■□□□ 1.28
CGRRF1-206ENST00000557317 NRXN3Q9Y4C0 1643 aa23.02■■□□□ 1.28
CGRRF1-206ENST00000557317 JCADQ9P266 1359 aa23.01■■□□□ 1.27
CGRRF1-206ENST00000557317 NUTM2DQ5VT03 806 aaPredicted RBP23■■□□□ 1.27
CGRRF1-206ENST00000557317 SETBP1Q9Y6X0 1596 aa23■■□□□ 1.27
CGRRF1-206ENST00000557317 XRN1Q8IZH2 1706 aaKnown RBP22.99■■□□□ 1.27
CGRRF1-206ENST00000557317 AHDC1Q5TGY3 1603 aaPredicted RBP22.99■■□□□ 1.27
CGRRF1-206ENST00000557317 PTPRUQ92729 1446 aa22.98■■□□□ 1.27
CGRRF1-206ENST00000557317 ITGAEP38570 1179 aa22.97■■□□□ 1.27
CGRRF1-206ENST00000557317 POTEAQ6S8J7 498 aa22.97■■□□□ 1.27
CGRRF1-206ENST00000557317 C19orf44Q9H6X5 657 aa22.96■■□□□ 1.27
CGRRF1-206ENST00000557317 SHPRHQ149N8 1683 aa22.95■■□□□ 1.26
CGRRF1-206ENST00000557317 CADPS2Q86UW7 1296 aa22.95■■□□□ 1.26
CGRRF1-206ENST00000557317 C14orf37Q86TY3 774 aa22.94■■□□□ 1.26
CGRRF1-206ENST00000557317 DCCP43146 1447 aa22.93■■□□□ 1.26
CGRRF1-206ENST00000557317 CLTCL1P53675 1640 aa22.93■■□□□ 1.26
CGRRF1-206ENST00000557317 AMOTL2Q9Y2J4 779 aa22.92■■□□□ 1.26
CGRRF1-206ENST00000557317 ATF3P18847 181 aa22.91■■□□□ 1.26
CGRRF1-206ENST00000557317 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
CGRRF1-206ENST00000557317 LRP6O75581 1613 aa22.9■■□□□ 1.26
CGRRF1-206ENST00000557317 NEXMIFQ5QGS0 1516 aa22.9■■□□□ 1.26
CGRRF1-206ENST00000557317 PPARGC1BQ86YN6 1023 aaKnown RBP22.89■■□□□ 1.25
CGRRF1-206ENST00000557317 KIF1BO60333 1816 aa22.89■■□□□ 1.25
CGRRF1-206ENST00000557317 SPATA31A6Q5VVP1 1343 aa22.88■■□□□ 1.25
CGRRF1-206ENST00000557317 SETD1AO15047 1707 aaKnown RBP22.88■■□□□ 1.25
CGRRF1-206ENST00000557317 NHSL1Q5SYE7 1610 aa22.86■■□□□ 1.25
CGRRF1-206ENST00000557317 NAIPQ13075 1403 aa22.86■■□□□ 1.25
CGRRF1-206ENST00000557317 ASXL1Q8IXJ9 1541 aa22.85■■□□□ 1.25
CGRRF1-206ENST00000557317 METP08581 1390 aa22.85■■□□□ 1.25
CGRRF1-206ENST00000557317 ZNF326Q5BKZ1 582 aaKnown RBP22.84■■□□□ 1.25
CGRRF1-206ENST00000557317 BRINP3Q76B58 766 aa22.84■■□□□ 1.25
CGRRF1-206ENST00000557317 MST1RQ04912 1400 aa22.83■■□□□ 1.25
CGRRF1-206ENST00000557317 NALCNQ8IZF0 1738 aa22.83■■□□□ 1.25
CGRRF1-206ENST00000557317 ADGRL3Q9HAR2 1447 aa22.81■■□□□ 1.24
CGRRF1-206ENST00000557317 SETD5Q9C0A6 1442 aa22.79■■□□□ 1.24
CGRRF1-206ENST00000557317 HFM1A2PYH4 1435 aa22.77■■□□□ 1.24
CGRRF1-206ENST00000557317 PTCH1Q13635 1447 aa22.75■■□□□ 1.23
CGRRF1-206ENST00000557317 MEX3CQ5U5Q3 659 aaKnown RBP22.75■■□□□ 1.23
CGRRF1-206ENST00000557317 ZNF772Q68DY9 489 aaPredicted RBP22.75■■□□□ 1.23
CGRRF1-206ENST00000557317 LAMC1P11047 1609 aa22.75■■□□□ 1.23
CGRRF1-206ENST00000557317 PRAG1Q86YV5 1406 aa22.74■■□□□ 1.23
CGRRF1-206ENST00000557317 PPLO60437 1756 aa22.74■■□□□ 1.23
CGRRF1-206ENST00000557317 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
CGRRF1-206ENST00000557317 RPGRIP1LQ68CZ1 1315 aa22.68■■□□□ 1.22
CGRRF1-206ENST00000557317 VGFO15240 615 aaPredicted RBP22.68■■□□□ 1.22
CGRRF1-206ENST00000557317 LRRC59Q96AG4 307 aaKnown RBP22.68■■□□□ 1.22
CGRRF1-206ENST00000557317 CDK12Q9NYV4 1490 aaPredicted RBP22.67■■□□□ 1.22
CGRRF1-206ENST00000557317 ROBO2Q9HCK4 1378 aa22.67■■□□□ 1.22
CGRRF1-206ENST00000557317 PNPLA6Q8IY17 1366 aa22.66■■□□□ 1.22
CGRRF1-206ENST00000557317 NUTM2BA6NNL0 878 aaPredicted RBP22.66■■□□□ 1.22
CGRRF1-206ENST00000557317 NUTM2EB1AL46 878 aaPredicted RBP22.66■■□□□ 1.22
CGRRF1-206ENST00000557317 NUTM2AQ8IVF1 878 aaPredicted RBP22.66■■□□□ 1.22
CGRRF1-206ENST00000557317 TRIM52Q96A61 297 aa22.65■■□□□ 1.22
CGRRF1-206ENST00000557317 SLC4A1APQ9BWU0 796 aaKnown RBP22.64■■□□□ 1.21
CGRRF1-206ENST00000557317 DDX17Q92841 729 aaKnown RBP22.63■■□□□ 1.21
CGRRF1-206ENST00000557317 AFF2P51816 1311 aa22.62■■□□□ 1.21
CGRRF1-206ENST00000557317 RXRBP28702 533 aa22.62■■□□□ 1.21
CGRRF1-206ENST00000557317 IFT172Q9UG01 1749 aa22.61■■□□□ 1.21
CGRRF1-206ENST00000557317 CDC42BPGQ6DT37 1551 aa22.6■■□□□ 1.21
CGRRF1-206ENST00000557317 UPF1Q92900 1129 aaKnown RBP eCLIP22.59■■□□□ 1.21
CGRRF1-206ENST00000557317 COL22A1Q8NFW1 1626 aaPredicted RBP22.58■■□□□ 1.21
CGRRF1-206ENST00000557317 SOS2Q07890 1332 aaPredicted RBP22.57■■□□□ 1.2
CGRRF1-206ENST00000557317 SPATA31E1Q6ZUB1 1445 aa22.56■■□□□ 1.2
CGRRF1-206ENST00000557317 C8orf37Q96NL8 207 aa22.55■■□□□ 1.2
CGRRF1-206ENST00000557317 ORAI2Q96SN7 254 aa22.55■■□□□ 1.2
CGRRF1-206ENST00000557317 CCDC144AA2RUR9 1427 aa22.55■■□□□ 1.2
CGRRF1-206ENST00000557317 KNDC1Q76NI1 1749 aa22.54■■□□□ 1.2
CGRRF1-206ENST00000557317 TECPR2O15040 1411 aa22.54■■□□□ 1.2
CGRRF1-206ENST00000557317 RGS12O14924 1447 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms