RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 NKTRP30414 1462 aaKnown RBP22.31■■□□□ 1.16
VRTN-202ENST00000557177 SENP3Q9H4L4 574 aaPredicted RBP22.31■■□□□ 1.16
VRTN-202ENST00000557177 FAM135BQ49AJ0 1406 aa22.31■■□□□ 1.16
VRTN-202ENST00000557177 ROCK1Q13464 1354 aa22.29■■□□□ 1.16
VRTN-202ENST00000557177 E9PCH4 1651 aa22.29■■□□□ 1.16
VRTN-202ENST00000557177 IQGAP3Q86VI3 1631 aa22.28■■□□□ 1.16
VRTN-202ENST00000557177 PLEKHG1Q9ULL1 1385 aa22.27■■□□□ 1.16
VRTN-202ENST00000557177 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
VRTN-202ENST00000557177 RIMS2Q9UQ26 1411 aa22.26■■□□□ 1.15
VRTN-202ENST00000557177 ROBO1Q9Y6N7 1651 aa22.26■■□□□ 1.15
VRTN-202ENST00000557177 CHD2O14647 1828 aaKnown RBP22.25■■□□□ 1.15
VRTN-202ENST00000557177 PROSER2Q86WR7 435 aaPredicted RBP22.25■■□□□ 1.15
VRTN-202ENST00000557177 RBM33Q96EV2 1170 aaKnown RBP22.23■■□□□ 1.15
VRTN-202ENST00000557177 HDGFP51858 240 aaKnown RBP22.2■■□□□ 1.14
VRTN-202ENST00000557177 BCANQ96GW7 911 aa22.2■■□□□ 1.14
VRTN-202ENST00000557177 PPP1R15AO75807 674 aaPredicted RBP22.19■■□□□ 1.14
VRTN-202ENST00000557177 MSH6P52701 1360 aa22.18■■□□□ 1.14
VRTN-202ENST00000557177 DIP2AQ14689 1571 aa22.17■■□□□ 1.14
VRTN-202ENST00000557177 ADAMTS13Q76LX8 1427 aa22.17■■□□□ 1.14
VRTN-202ENST00000557177 TBX22Q9Y458 520 aa22.17■■□□□ 1.14
VRTN-202ENST00000557177 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.16■■□□□ 1.14
VRTN-202ENST00000557177 RGS17Q9UGC6 210 aaPredicted RBP22.16■■□□□ 1.14
VRTN-202ENST00000557177 NUP155O75694 1391 aa22.15■■□□□ 1.14
VRTN-202ENST00000557177 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.13
VRTN-202ENST00000557177 CHGAP10645 457 aaKnown RBP22.13■■□□□ 1.13
VRTN-202ENST00000557177 SLAIN2Q9P270 581 aa22.12■■□□□ 1.13
VRTN-202ENST00000557177 PIK3R4Q99570 1358 aa22.12■■□□□ 1.13
VRTN-202ENST00000557177 PHLPP1O60346 1717 aa22.11■■□□□ 1.13
VRTN-202ENST00000557177 ITGAEP38570 1179 aa22.1■■□□□ 1.13
VRTN-202ENST00000557177 SPHKAPQ2M3C7 1700 aa22.1■■□□□ 1.13
VRTN-202ENST00000557177 NUTM2DQ5VT03 806 aaPredicted RBP22.09■■□□□ 1.13
VRTN-202ENST00000557177 TRPM2O94759 1503 aa22.08■■□□□ 1.13
VRTN-202ENST00000557177 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.08■■□□□ 1.12
VRTN-202ENST00000557177 COL16A1Q07092 1604 aaPredicted RBP22.06■■□□□ 1.12
VRTN-202ENST00000557177 NRXN3Q9Y4C0 1643 aa22.06■■□□□ 1.12
VRTN-202ENST00000557177 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
VRTN-202ENST00000557177 PTPRUQ92729 1446 aa22.05■■□□□ 1.12
VRTN-202ENST00000557177 SETBP1Q9Y6X0 1596 aa22.04■■□□□ 1.12
VRTN-202ENST00000557177 JCADQ9P266 1359 aa22.03■■□□□ 1.12
VRTN-202ENST00000557177 XRN1Q8IZH2 1706 aaKnown RBP22.03■■□□□ 1.12
VRTN-202ENST00000557177 RRBP1Q9P2E9 1410 aaKnown RBP22.02■■□□□ 1.12
VRTN-202ENST00000557177 POTEAQ6S8J7 498 aa22.01■■□□□ 1.11
VRTN-202ENST00000557177 C19orf44Q9H6X5 657 aa22.01■■□□□ 1.11
VRTN-202ENST00000557177 AHDC1Q5TGY3 1603 aaPredicted RBP22.01■■□□□ 1.11
VRTN-202ENST00000557177 C14orf37Q86TY3 774 aa22■■□□□ 1.11
VRTN-202ENST00000557177 CADPS2Q86UW7 1296 aa22■■□□□ 1.11
VRTN-202ENST00000557177 AMOTL2Q9Y2J4 779 aa22■■□□□ 1.11
VRTN-202ENST00000557177 CLTCL1P53675 1640 aa21.99■■□□□ 1.11
VRTN-202ENST00000557177 DCCP43146 1447 aa21.97■■□□□ 1.11
VRTN-202ENST00000557177 NAIPQ13075 1403 aa21.97■■□□□ 1.11
VRTN-202ENST00000557177 NEXMIFQ5QGS0 1516 aa21.96■■□□□ 1.11
VRTN-202ENST00000557177 ATF3P18847 181 aa21.96■■□□□ 1.11
VRTN-202ENST00000557177 SHPRHQ149N8 1683 aa21.95■■□□□ 1.1
VRTN-202ENST00000557177 LRP6O75581 1613 aa21.94■■□□□ 1.1
VRTN-202ENST00000557177 KIF1BO60333 1816 aa21.93■■□□□ 1.1
VRTN-202ENST00000557177 METP08581 1390 aa21.93■■□□□ 1.1
VRTN-202ENST00000557177 ZNF326Q5BKZ1 582 aaKnown RBP21.93■■□□□ 1.1
VRTN-202ENST00000557177 SPATA31A6Q5VVP1 1343 aa21.92■■□□□ 1.1
VRTN-202ENST00000557177 BRINP3Q76B58 766 aa21.91■■□□□ 1.1
VRTN-202ENST00000557177 ASXL1Q8IXJ9 1541 aa21.9■■□□□ 1.1
VRTN-202ENST00000557177 MST1RQ04912 1400 aa21.89■■□□□ 1.1
VRTN-202ENST00000557177 HFM1A2PYH4 1435 aa21.88■■□□□ 1.09
VRTN-202ENST00000557177 NHSL1Q5SYE7 1610 aa21.88■■□□□ 1.09
VRTN-202ENST00000557177 SETD1AO15047 1707 aaKnown RBP21.87■■□□□ 1.09
VRTN-202ENST00000557177 NALCNQ8IZF0 1738 aa21.87■■□□□ 1.09
VRTN-202ENST00000557177 ADGRL3Q9HAR2 1447 aa21.87■■□□□ 1.09
VRTN-202ENST00000557177 SETD5Q9C0A6 1442 aa21.83■■□□□ 1.09
VRTN-202ENST00000557177 PTCH1Q13635 1447 aa21.81■■□□□ 1.08
VRTN-202ENST00000557177 MEX3CQ5U5Q3 659 aaKnown RBP21.8■■□□□ 1.08
VRTN-202ENST00000557177 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
VRTN-202ENST00000557177 PPLO60437 1756 aa21.79■■□□□ 1.08
VRTN-202ENST00000557177 ZNF772Q68DY9 489 aaPredicted RBP21.79■■□□□ 1.08
VRTN-202ENST00000557177 VGFO15240 615 aaPredicted RBP21.78■■□□□ 1.08
VRTN-202ENST00000557177 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
VRTN-202ENST00000557177 RPGRIP1LQ68CZ1 1315 aa21.77■■□□□ 1.07
VRTN-202ENST00000557177 LAMC1P11047 1609 aa21.77■■□□□ 1.07
VRTN-202ENST00000557177 SLC4A1APQ9BWU0 796 aaKnown RBP21.76■■□□□ 1.07
VRTN-202ENST00000557177 ROBO2Q9HCK4 1378 aa21.75■■□□□ 1.07
VRTN-202ENST00000557177 C1orf167Q5SNV9 1468 aa21.75■■□□□ 1.07
VRTN-202ENST00000557177 LRRC59Q96AG4 307 aaKnown RBP21.74■■□□□ 1.07
VRTN-202ENST00000557177 NUTM2BA6NNL0 878 aaPredicted RBP21.73■■□□□ 1.07
VRTN-202ENST00000557177 NUTM2EB1AL46 878 aaPredicted RBP21.73■■□□□ 1.07
VRTN-202ENST00000557177 NUTM2AQ8IVF1 878 aaPredicted RBP21.73■■□□□ 1.07
VRTN-202ENST00000557177 PNPLA6Q8IY17 1366 aa21.73■■□□□ 1.07
VRTN-202ENST00000557177 DDX17Q92841 729 aaKnown RBP21.72■■□□□ 1.07
VRTN-202ENST00000557177 CDK12Q9NYV4 1490 aaPredicted RBP21.69■■□□□ 1.06
VRTN-202ENST00000557177 AFF2P51816 1311 aa21.68■■□□□ 1.06
VRTN-202ENST00000557177 IFT172Q9UG01 1749 aa21.67■■□□□ 1.06
VRTN-202ENST00000557177 RXRBP28702 533 aa21.67■■□□□ 1.06
VRTN-202ENST00000557177 FOXD1Q16676 465 aa21.66■■□□□ 1.06
VRTN-202ENST00000557177 CDC42BPGQ6DT37 1551 aa21.65■■□□□ 1.06
VRTN-202ENST00000557177 SPATA31E1Q6ZUB1 1445 aa21.65■■□□□ 1.06
VRTN-202ENST00000557177 SOS2Q07890 1332 aaPredicted RBP21.65■■□□□ 1.06
VRTN-202ENST00000557177 CCDC144AA2RUR9 1427 aa21.64■■□□□ 1.06
VRTN-202ENST00000557177 ORAI2Q96SN7 254 aa21.64■■□□□ 1.05
VRTN-202ENST00000557177 UPF1Q92900 1129 aaKnown RBP eCLIP21.63■■□□□ 1.05
VRTN-202ENST00000557177 ADGRF5Q8IZF2 1346 aa21.62■■□□□ 1.05
VRTN-202ENST00000557177 C8orf37Q96NL8 207 aa21.62■■□□□ 1.05
VRTN-202ENST00000557177 TECPR2O15040 1411 aa21.62■■□□□ 1.05
VRTN-202ENST00000557177 COL22A1Q8NFW1 1626 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms