RNA–Protein interactions for RNA: ENST00000557163.1

TMEM30B-203, Transcript of transmembrane protein 30B, humanhuman

TSL 1 (best)

Gene TMEM30B, Length 1,263 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30B-203ENST00000557163 ALKQ9UM73 1620 aa27.55■■■□□ 2
TMEM30B-203ENST00000557163 SLC26A8Q96RN1 970 aa27.53■■■□□ 2
TMEM30B-203ENST00000557163 MYO5BQ9ULV0 1848 aa27.53■■■□□ 2
TMEM30B-203ENST00000557163 BCANQ96GW7 911 aa27.52■■■□□ 2
TMEM30B-203ENST00000557163 SENP3Q9H4L4 574 aaPredicted RBP27.52■■■□□ 2
TMEM30B-203ENST00000557163 TRIM52Q96A61 297 aa27.51■■□□□ 1.99
TMEM30B-203ENST00000557163 CHGAP10645 457 aaKnown RBP27.5■■□□□ 1.99
TMEM30B-203ENST00000557163 SPHKAPQ2M3C7 1700 aa27.5■■□□□ 1.99
TMEM30B-203ENST00000557163 XIRP1Q702N8 1843 aaKnown RBP27.48■■□□□ 1.99
TMEM30B-203ENST00000557163 TMEM131LA2VDJ0 1609 aa27.46■■□□□ 1.99
TMEM30B-203ENST00000557163 KCNA6P17658 529 aa27.46■■□□□ 1.99
TMEM30B-203ENST00000557163 HRCP23327 699 aa27.46■■□□□ 1.99
TMEM30B-203ENST00000557163 ZFYVE9O95405 1425 aa27.45■■□□□ 1.98
TMEM30B-203ENST00000557163 RIMS2Q9UQ26 1411 aa27.45■■□□□ 1.98
TMEM30B-203ENST00000557163 PPP1R15AO75807 674 aaPredicted RBP27.45■■□□□ 1.98
TMEM30B-203ENST00000557163 HDGFP51858 240 aaKnown RBP27.44■■□□□ 1.98
TMEM30B-203ENST00000557163 SLC4A1APQ9BWU0 796 aaKnown RBP27.43■■□□□ 1.98
TMEM30B-203ENST00000557163 PROSER2Q86WR7 435 aaPredicted RBP27.42■■□□□ 1.98
TMEM30B-203ENST00000557163 TMEM94Q12767 1356 aa27.41■■□□□ 1.98
TMEM30B-203ENST00000557163 RAB3GAP2Q9H2M9 1393 aa27.4■■□□□ 1.98
TMEM30B-203ENST00000557163 PLEKHG1Q9ULL1 1385 aa27.4■■□□□ 1.98
TMEM30B-203ENST00000557163 NUTM2DQ5VT03 806 aaPredicted RBP27.39■■□□□ 1.98
TMEM30B-203ENST00000557163 RBM33Q96EV2 1170 aaKnown RBP27.39■■□□□ 1.98
TMEM30B-203ENST00000557163 TRPM2O94759 1503 aa27.38■■□□□ 1.97
TMEM30B-203ENST00000557163 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.37■■□□□ 1.97
TMEM30B-203ENST00000557163 NWD1Q149M9 1564 aa27.35■■□□□ 1.97
TMEM30B-203ENST00000557163 MED1Q15648 1581 aaPredicted RBP27.35■■□□□ 1.97
TMEM30B-203ENST00000557163 NKTRP30414 1462 aaKnown RBP27.33■■□□□ 1.97
TMEM30B-203ENST00000557163 KIF1BO60333 1816 aa27.33■■□□□ 1.97
TMEM30B-203ENST00000557163 MPHOSPH9Q99550 1183 aa27.33■■□□□ 1.97
TMEM30B-203ENST00000557163 SOCS7O14512 581 aa27.32■■□□□ 1.96
TMEM30B-203ENST00000557163 TBX22Q9Y458 520 aa27.31■■□□□ 1.96
TMEM30B-203ENST00000557163 CHD2O14647 1828 aaKnown RBP27.31■■□□□ 1.96
TMEM30B-203ENST00000557163 CLTCL1P53675 1640 aa27.27■■□□□ 1.96
TMEM30B-203ENST00000557163 ADAMTS13Q76LX8 1427 aa27.26■■□□□ 1.95
TMEM30B-203ENST00000557163 TRIM26Q12899 539 aaPredicted RBP27.26■■□□□ 1.95
TMEM30B-203ENST00000557163 FAM135BQ49AJ0 1406 aa27.25■■□□□ 1.95
TMEM30B-203ENST00000557163 MSH6P52701 1360 aa27.25■■□□□ 1.95
TMEM30B-203ENST00000557163 ZNF326Q5BKZ1 582 aaKnown RBP27.23■■□□□ 1.95
TMEM30B-203ENST00000557163 PHF23Q9BUL5 403 aaPredicted RBP27.22■■□□□ 1.95
TMEM30B-203ENST00000557163 DIP2AQ14689 1571 aa27.22■■□□□ 1.95
TMEM30B-203ENST00000557163 ROBO1Q9Y6N7 1651 aa27.21■■□□□ 1.95
TMEM30B-203ENST00000557163 CCDC144AA2RUR9 1427 aa27.2■■□□□ 1.94
TMEM30B-203ENST00000557163 C14orf37Q86TY3 774 aa27.19■■□□□ 1.94
TMEM30B-203ENST00000557163 PIK3R4Q99570 1358 aa27.18■■□□□ 1.94
TMEM30B-203ENST00000557163 SLAIN2Q9P270 581 aa27.17■■□□□ 1.94
TMEM30B-203ENST00000557163 AMOTL2Q9Y2J4 779 aa27.15■■□□□ 1.94
TMEM30B-203ENST00000557163 RPGRIP1LQ68CZ1 1315 aa27.14■■□□□ 1.93
TMEM30B-203ENST00000557163 PTPRUQ92729 1446 aa27.12■■□□□ 1.93
TMEM30B-203ENST00000557163 NCOA3Q9Y6Q9 1424 aa27.12■■□□□ 1.93
TMEM30B-203ENST00000557163 NRXN3Q9Y4C0 1643 aa27.12■■□□□ 1.93
TMEM30B-203ENST00000557163 FOXD1Q16676 465 aa27.11■■□□□ 1.93
TMEM30B-203ENST00000557163 SETBP1Q9Y6X0 1596 aa27.1■■□□□ 1.93
TMEM30B-203ENST00000557163 NEXMIFQ5QGS0 1516 aa27.08■■□□□ 1.93
TMEM30B-203ENST00000557163 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.07■■□□□ 1.92
TMEM30B-203ENST00000557163 C19orf44Q9H6X5 657 aa27.07■■□□□ 1.92
TMEM30B-203ENST00000557163 ATF3P18847 181 aa27.06■■□□□ 1.92
TMEM30B-203ENST00000557163 PPLO60437 1756 aa27.06■■□□□ 1.92
TMEM30B-203ENST00000557163 PHLPP1O60346 1717 aa27.05■■□□□ 1.92
TMEM30B-203ENST00000557163 VGFO15240 615 aaPredicted RBP27.05■■□□□ 1.92
TMEM30B-203ENST00000557163 CADPS2Q86UW7 1296 aa27.05■■□□□ 1.92
TMEM30B-203ENST00000557163 ANKRD30BQ9BXX2 1392 aa27.05■■□□□ 1.92
TMEM30B-203ENST00000557163 METP08581 1390 aa27.04■■□□□ 1.92
TMEM30B-203ENST00000557163 XRN1Q8IZH2 1706 aaKnown RBP27.03■■□□□ 1.92
TMEM30B-203ENST00000557163 SPATA31E1Q6ZUB1 1445 aa27.02■■□□□ 1.92
TMEM30B-203ENST00000557163 IFT172Q9UG01 1749 aa26.99■■□□□ 1.91
TMEM30B-203ENST00000557163 RGS17Q9UGC6 210 aaPredicted RBP26.98■■□□□ 1.91
TMEM30B-203ENST00000557163 JCADQ9P266 1359 aa26.96■■□□□ 1.91
TMEM30B-203ENST00000557163 STAC3Q96MF2 364 aa26.95■■□□□ 1.9
TMEM30B-203ENST00000557163 COL16A1Q07092 1604 aaPredicted RBP26.94■■□□□ 1.9
TMEM30B-203ENST00000557163 DCCP43146 1447 aa26.92■■□□□ 1.9
TMEM30B-203ENST00000557163 BRINP3Q76B58 766 aa26.91■■□□□ 1.9
TMEM30B-203ENST00000557163 RGL3Q3MIN7 710 aa26.9■■□□□ 1.9
TMEM30B-203ENST00000557163 AHDC1Q5TGY3 1603 aaPredicted RBP26.9■■□□□ 1.9
TMEM30B-203ENST00000557163 SETD1AO15047 1707 aaKnown RBP26.88■■□□□ 1.89
TMEM30B-203ENST00000557163 ADGRL3Q9HAR2 1447 aa26.88■■□□□ 1.89
TMEM30B-203ENST00000557163 MYOM2P54296 1465 aa26.87■■□□□ 1.89
TMEM30B-203ENST00000557163 MST1RQ04912 1400 aa26.87■■□□□ 1.89
TMEM30B-203ENST00000557163 NALCNQ8IZF0 1738 aa26.85■■□□□ 1.89
TMEM30B-203ENST00000557163 POTEAQ6S8J7 498 aa26.85■■□□□ 1.89
TMEM30B-203ENST00000557163 LAMC1P11047 1609 aa26.84■■□□□ 1.89
TMEM30B-203ENST00000557163 ASXL1Q8IXJ9 1541 aa26.83■■□□□ 1.89
TMEM30B-203ENST00000557163 ROBO2Q9HCK4 1378 aa26.83■■□□□ 1.88
TMEM30B-203ENST00000557163 PTCH1Q13635 1447 aa26.82■■□□□ 1.88
TMEM30B-203ENST00000557163 SPATA31A6Q5VVP1 1343 aa26.81■■□□□ 1.88
TMEM30B-203ENST00000557163 DHX57Q6P158 1386 aaKnown RBP26.81■■□□□ 1.88
TMEM30B-203ENST00000557163 ADGRF5Q8IZF2 1346 aa26.8■■□□□ 1.88
TMEM30B-203ENST00000557163 PIK3C2GO75747 1445 aa26.8■■□□□ 1.88
TMEM30B-203ENST00000557163 NRXN1Q9ULB1 1477 aa26.8■■□□□ 1.88
TMEM30B-203ENST00000557163 LRP6O75581 1613 aa26.79■■□□□ 1.88
TMEM30B-203ENST00000557163 SHPRHQ149N8 1683 aa26.79■■□□□ 1.88
TMEM30B-203ENST00000557163 MEX3CQ5U5Q3 659 aaKnown RBP26.78■■□□□ 1.88
TMEM30B-203ENST00000557163 NHSL1Q5SYE7 1610 aa26.76■■□□□ 1.87
TMEM30B-203ENST00000557163 DDX17Q92841 729 aaKnown RBP26.76■■□□□ 1.87
TMEM30B-203ENST00000557163 PRAG1Q86YV5 1406 aa26.75■■□□□ 1.87
TMEM30B-203ENST00000557163 NUTM2BA6NNL0 878 aaPredicted RBP26.74■■□□□ 1.87
TMEM30B-203ENST00000557163 NUTM2EB1AL46 878 aaPredicted RBP26.74■■□□□ 1.87
TMEM30B-203ENST00000557163 NUTM2AQ8IVF1 878 aaPredicted RBP26.74■■□□□ 1.87
TMEM30B-203ENST00000557163 C1orf167Q5SNV9 1468 aa26.74■■□□□ 1.87
TMEM30B-203ENST00000557163 DCAF11Q8TEB1 546 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms