RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 ARHGAP23Q9P227 1491 aa33.92■■■■□ 3.02
SIX4-203ENST00000556952 IFT172Q9UG01 1749 aa33.88■■■■□ 3.01
SIX4-203ENST00000556952 RGL3Q3MIN7 710 aa33.87■■■■□ 3.01
SIX4-203ENST00000556952 DCAF11Q8TEB1 546 aa33.86■■■■□ 3.01
SIX4-203ENST00000556952 TMEM2Q9UHN6 1383 aa33.86■■■■□ 3.01
SIX4-203ENST00000556952 CHGAP10645 457 aaKnown RBP33.85■■■■□ 3.01
SIX4-203ENST00000556952 ANKLE2Q86XL3 938 aa33.84■■■■□ 3.01
SIX4-203ENST00000556952 STAC3Q96MF2 364 aa33.83■■■■□ 3.01
SIX4-203ENST00000556952 SCAF11Q99590 1463 aaKnown RBP33.82■■■■□ 3
SIX4-203ENST00000556952 LTKP29376 864 aa33.81■■■■□ 3
SIX4-203ENST00000556952 IQGAP1P46940 1657 aa33.8■■■■□ 3
SIX4-203ENST00000556952 MED14O60244 1454 aa33.8■■■■□ 3
SIX4-203ENST00000556952 NBPF8Q3BBV2 869 aa33.8■■■■□ 3
SIX4-203ENST00000556952 PRAG1Q86YV5 1406 aa33.8■■■■□ 3
SIX4-203ENST00000556952 PPLO60437 1756 aa33.79■■■■□ 3
SIX4-203ENST00000556952 DMRT2Q9Y5R5 561 aa33.79■■■■□ 3
SIX4-203ENST00000556952 ZFYVE9O95405 1425 aa33.78■■■■□ 3
SIX4-203ENST00000556952 MYOM2P54296 1465 aa33.78■■■■□ 3
SIX4-203ENST00000556952 RALGAPBQ86X10 1494 aa33.77■■■■□ 3
SIX4-203ENST00000556952 TRPM1Q7Z4N2 1603 aa33.77■■■■□ 3
SIX4-203ENST00000556952 TXNDC2Q86VQ3 553 aa33.77■■■■□ 3
SIX4-203ENST00000556952 NPHP4O75161 1426 aaPredicted RBP33.76■■■□□ 2.99
SIX4-203ENST00000556952 KDM2AQ9Y2K7 1162 aa33.76■■■□□ 2.99
SIX4-203ENST00000556952 RIMS2Q9UQ26 1411 aa33.75■■■□□ 2.99
SIX4-203ENST00000556952 RPGRIP1LQ68CZ1 1315 aa33.72■■■□□ 2.99
SIX4-203ENST00000556952 EID1Q9Y6B2 187 aa33.72■■■□□ 2.99
SIX4-203ENST00000556952 ZNF326Q5BKZ1 582 aaKnown RBP33.71■■■□□ 2.99
SIX4-203ENST00000556952 ZNF316A6NFI3 1004 aaPredicted RBP33.69■■■□□ 2.98
SIX4-203ENST00000556952 NEXMIFQ5QGS0 1516 aa33.69■■■□□ 2.98
SIX4-203ENST00000556952 KIAA1210Q9ULL0 1709 aa33.67■■■□□ 2.98
SIX4-203ENST00000556952 NUTM2DQ5VT03 806 aaPredicted RBP33.67■■■□□ 2.98
SIX4-203ENST00000556952 NRXN1Q9ULB1 1477 aa33.66■■■□□ 2.98
SIX4-203ENST00000556952 LAMC1P11047 1609 aa33.65■■■□□ 2.98
SIX4-203ENST00000556952 SENP3Q9H4L4 574 aaPredicted RBP33.61■■■□□ 2.97
SIX4-203ENST00000556952 PLEKHG1Q9ULL1 1385 aa33.59■■■□□ 2.97
SIX4-203ENST00000556952 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.59■■■□□ 2.97
SIX4-203ENST00000556952 ZNF335Q9H4Z2 1342 aaPredicted RBP33.57■■■□□ 2.97
SIX4-203ENST00000556952 HDGFP51858 240 aaKnown RBP33.57■■■□□ 2.96
SIX4-203ENST00000556952 ROCK2O75116 1388 aaKnown RBP33.57■■■□□ 2.96
SIX4-203ENST00000556952 GPRASP1Q5JY77 1395 aa33.57■■■□□ 2.96
SIX4-203ENST00000556952 LTBP4Q8N2S1 1624 aa33.56■■■□□ 2.96
SIX4-203ENST00000556952 EIF4G2P78344 907 aaKnown RBP eCLIP33.55■■■□□ 2.96
SIX4-203ENST00000556952 STRCP1A6NGW2 1772 aa33.55■■■□□ 2.96
SIX4-203ENST00000556952 NRXN3Q9Y4C0 1643 aa33.54■■■□□ 2.96
SIX4-203ENST00000556952 PIK3C2GO75747 1445 aa33.54■■■□□ 2.96
SIX4-203ENST00000556952 ADGRF5Q8IZF2 1346 aa33.53■■■□□ 2.96
SIX4-203ENST00000556952 VGFO15240 615 aaPredicted RBP33.52■■■□□ 2.96
SIX4-203ENST00000556952 SLC26A8Q96RN1 970 aa33.52■■■□□ 2.96
SIX4-203ENST00000556952 BCANQ96GW7 911 aa33.5■■■□□ 2.95
SIX4-203ENST00000556952 CARD11Q9BXL7 1154 aa33.5■■■□□ 2.95
SIX4-203ENST00000556952 ADAMTS13Q76LX8 1427 aa33.49■■■□□ 2.95
SIX4-203ENST00000556952 SETBP1Q9Y6X0 1596 aa33.49■■■□□ 2.95
SIX4-203ENST00000556952 USP47Q96K76 1375 aa33.48■■■□□ 2.95
SIX4-203ENST00000556952 HSPA5P11021 654 aaKnown RBP33.46■■■□□ 2.95
SIX4-203ENST00000556952 DIP2AQ14689 1571 aa33.45■■■□□ 2.95
SIX4-203ENST00000556952 NBPF1Q3BBV0 1214 aa33.43■■■□□ 2.94
SIX4-203ENST00000556952 CHD2O14647 1828 aaKnown RBP33.41■■■□□ 2.94
SIX4-203ENST00000556952 SETD1AO15047 1707 aaKnown RBP33.41■■■□□ 2.94
SIX4-203ENST00000556952 CPS1P31327 1500 aa33.38■■■□□ 2.93
SIX4-203ENST00000556952 TBX22Q9Y458 520 aa33.38■■■□□ 2.93
SIX4-203ENST00000556952 NWD1Q149M9 1564 aa33.38■■■□□ 2.93
SIX4-203ENST00000556952 CFAP70Q5T0N1 1121 aa33.37■■■□□ 2.93
SIX4-203ENST00000556952 C14orf93Q9H972 538 aaKnown RBP33.37■■■□□ 2.93
SIX4-203ENST00000556952 HIRIP3Q9BW71 556 aaPredicted RBP33.36■■■□□ 2.93
SIX4-203ENST00000556952 CERKQ8TCT0 537 aa33.35■■■□□ 2.93
SIX4-203ENST00000556952 ADGRB1O14514 1584 aa33.35■■■□□ 2.93
SIX4-203ENST00000556952 ALKQ9UM73 1620 aa33.34■■■□□ 2.93
SIX4-203ENST00000556952 XIRP1Q702N8 1843 aaKnown RBP33.3■■■□□ 2.92
SIX4-203ENST00000556952 KCNA6P17658 529 aa33.3■■■□□ 2.92
SIX4-203ENST00000556952 LRRC7Q96NW7 1537 aa33.29■■■□□ 2.92
SIX4-203ENST00000556952 METP08581 1390 aa33.29■■■□□ 2.92
SIX4-203ENST00000556952 PTPRUQ92729 1446 aa33.29■■■□□ 2.92
SIX4-203ENST00000556952 EIF3AQ14152 1382 aaKnown RBP33.27■■■□□ 2.92
SIX4-203ENST00000556952 PIK3R4Q99570 1358 aa33.27■■■□□ 2.92
SIX4-203ENST00000556952 XRN1Q8IZH2 1706 aaKnown RBP33.26■■■□□ 2.92
SIX4-203ENST00000556952 NKTRP30414 1462 aaKnown RBP33.25■■■□□ 2.91
SIX4-203ENST00000556952 ASXL1Q8IXJ9 1541 aa33.25■■■□□ 2.91
SIX4-203ENST00000556952 IQSEC2Q5JU85 1478 aa33.23■■■□□ 2.91
SIX4-203ENST00000556952 ST20-MTHFSA0A0A6YYL1 179 aa33.23■■■□□ 2.91
SIX4-203ENST00000556952 ARHGEF28Q8N1W1 1705 aaKnown RBP33.18■■■□□ 2.9
SIX4-203ENST00000556952 AMOTL2Q9Y2J4 779 aa33.17■■■□□ 2.9
SIX4-203ENST00000556952 DIEXFQ68CQ4 756 aaKnown RBP33.17■■■□□ 2.9
SIX4-203ENST00000556952 RBM33Q96EV2 1170 aaKnown RBP33.16■■■□□ 2.9
SIX4-203ENST00000556952 TMEM94Q12767 1356 aa33.15■■■□□ 2.9
SIX4-203ENST00000556952 WASHC2AQ641Q2 1341 aa33.14■■■□□ 2.9
SIX4-203ENST00000556952 TMEM132EQ6IEE7 984 aa33.13■■■□□ 2.89
SIX4-203ENST00000556952 PROSER2Q86WR7 435 aaPredicted RBP33.13■■■□□ 2.89
SIX4-203ENST00000556952 CCDC7Q96M83 1385 aa33.13■■■□□ 2.89
SIX4-203ENST00000556952 YTHDC2Q9H6S0 1430 aaKnown RBP33.11■■■□□ 2.89
SIX4-203ENST00000556952 QRICH2Q9H0J4 1663 aa33.1■■■□□ 2.89
SIX4-203ENST00000556952 TESK2Q96S53 571 aa33.1■■■□□ 2.89
SIX4-203ENST00000556952 KNDC1Q76NI1 1749 aa33.09■■■□□ 2.89
SIX4-203ENST00000556952 C11orf95C9JLR9 678 aaPredicted RBP33.09■■■□□ 2.89
SIX4-203ENST00000556952 KIF7Q2M1P5 1343 aa33.08■■■□□ 2.89
SIX4-203ENST00000556952 SBNO2Q9Y2G9 1366 aa33.07■■■□□ 2.89
SIX4-203ENST00000556952 SLC24A1O60721 1099 aa33.07■■■□□ 2.88
SIX4-203ENST00000556952 DLC1Q96QB1 1528 aa33.06■■■□□ 2.88
SIX4-203ENST00000556952 TRAK1Q9UPV9 953 aa33.06■■■□□ 2.88
SIX4-203ENST00000556952 LRPPRCP42704 1394 aaKnown RBP33.04■■■□□ 2.88
SIX4-203ENST00000556952 CENPJQ9HC77 1338 aaPredicted RBP33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms