RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SLC52A1Q9NWF4 448 aa14.13□□□□□ -0.15
HNRNPC-227ENST00000556897 NWD1Q149M9 1564 aa14.13□□□□□ -0.15
HNRNPC-227ENST00000556897 MSH6P52701 1360 aa14.12□□□□□ -0.15
HNRNPC-227ENST00000556897 SLAIN2Q9P270 581 aa14.12□□□□□ -0.15
HNRNPC-227ENST00000556897 PPP1R15AO75807 674 aaPredicted RBP14.09□□□□□ -0.15
HNRNPC-227ENST00000556897 ZFYVE9O95405 1425 aa14.08□□□□□ -0.15
HNRNPC-227ENST00000556897 RPRD2Q5VT52 1461 aaKnown RBP14.08□□□□□ -0.16
HNRNPC-227ENST00000556897 PHLPP1O60346 1717 aa14.08□□□□□ -0.16
HNRNPC-227ENST00000556897 JCADQ9P266 1359 aa14.08□□□□□ -0.16
HNRNPC-227ENST00000556897 PLEKHG1Q9ULL1 1385 aa14.08□□□□□ -0.16
HNRNPC-227ENST00000556897 ADGRL2O95490 1459 aa14.07□□□□□ -0.16
HNRNPC-227ENST00000556897 ANKRD50Q9ULJ7 1429 aa14.07□□□□□ -0.16
HNRNPC-227ENST00000556897 RIMS2Q9UQ26 1411 aa14.07□□□□□ -0.16
HNRNPC-227ENST00000556897 FAM50AQ14320 339 aaKnown RBP14.06□□□□□ -0.16
HNRNPC-227ENST00000556897 MYO5BQ9ULV0 1848 aa14.06□□□□□ -0.16
HNRNPC-227ENST00000556897 SETD1AO15047 1707 aaKnown RBP14.05□□□□□ -0.16
HNRNPC-227ENST00000556897 HDGFP51858 240 aaKnown RBP14.05□□□□□ -0.16
HNRNPC-227ENST00000556897 C14orf37Q86TY3 774 aa14.05□□□□□ -0.16
HNRNPC-227ENST00000556897 CHD2O14647 1828 aaKnown RBP14.05□□□□□ -0.16
HNRNPC-227ENST00000556897 NUTM2DQ5VT03 806 aaPredicted RBP14.04□□□□□ -0.16
HNRNPC-227ENST00000556897 TBX22Q9Y458 520 aa14.04□□□□□ -0.16
HNRNPC-227ENST00000556897 TMEM131LA2VDJ0 1609 aa14.04□□□□□ -0.16
HNRNPC-227ENST00000556897 GCC2Q8IWJ2 1684 aa14.04□□□□□ -0.16
HNRNPC-227ENST00000556897 CHGAP10645 457 aaKnown RBP14.03□□□□□ -0.16
HNRNPC-227ENST00000556897 COL16A1Q07092 1604 aaPredicted RBP14.03□□□□□ -0.16
HNRNPC-227ENST00000556897 LRP6O75581 1613 aa14.01□□□□□ -0.17
HNRNPC-227ENST00000556897 ADAMTS13Q76LX8 1427 aa14.01□□□□□ -0.17
HNRNPC-227ENST00000556897 NCOA3Q9Y6Q9 1424 aa14.01□□□□□ -0.17
HNRNPC-227ENST00000556897 SPATA31A6Q5VVP1 1343 aa14.01□□□□□ -0.17
HNRNPC-227ENST00000556897 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.01□□□□□ -0.17
HNRNPC-227ENST00000556897 MEX3CQ5U5Q3 659 aaKnown RBP14□□□□□ -0.17
HNRNPC-227ENST00000556897 CADPS2Q86UW7 1296 aa14□□□□□ -0.17
HNRNPC-227ENST00000556897 C19orf44Q9H6X5 657 aa14□□□□□ -0.17
HNRNPC-227ENST00000556897 ATF3P18847 181 aa13.99□□□□□ -0.17
HNRNPC-227ENST00000556897 ZNF772Q68DY9 489 aaPredicted RBP13.98□□□□□ -0.17
HNRNPC-227ENST00000556897 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.98□□□□□ -0.17
HNRNPC-227ENST00000556897 UNC13BO14795 1591 aa13.97□□□□□ -0.17
HNRNPC-227ENST00000556897 TRIM52Q96A61 297 aa13.97□□□□□ -0.17
HNRNPC-227ENST00000556897 E9PCH4 1651 aa13.97□□□□□ -0.17
HNRNPC-227ENST00000556897 AHDC1Q5TGY3 1603 aaPredicted RBP13.97□□□□□ -0.17
HNRNPC-227ENST00000556897 PIK3R4Q99570 1358 aa13.96□□□□□ -0.17
HNRNPC-227ENST00000556897 DIP2AQ14689 1571 aa13.96□□□□□ -0.17
HNRNPC-227ENST00000556897 AMOTL2Q9Y2J4 779 aa13.96□□□□□ -0.17
HNRNPC-227ENST00000556897 BRINP3Q76B58 766 aa13.95□□□□□ -0.18
HNRNPC-227ENST00000556897 UPF1Q92900 1129 aaKnown RBP eCLIP13.95□□□□□ -0.18
HNRNPC-227ENST00000556897 NUTM2BA6NNL0 878 aaPredicted RBP13.94□□□□□ -0.18
HNRNPC-227ENST00000556897 NUTM2EB1AL46 878 aaPredicted RBP13.94□□□□□ -0.18
HNRNPC-227ENST00000556897 NUTM2AQ8IVF1 878 aaPredicted RBP13.94□□□□□ -0.18
HNRNPC-227ENST00000556897 PTPRUQ92729 1446 aa13.94□□□□□ -0.18
HNRNPC-227ENST00000556897 SHPRHQ149N8 1683 aa13.94□□□□□ -0.18
HNRNPC-227ENST00000556897 TRPM2O94759 1503 aa13.94□□□□□ -0.18
HNRNPC-227ENST00000556897 RXRBP28702 533 aa13.92□□□□□ -0.18
HNRNPC-227ENST00000556897 IQGAP3Q86VI3 1631 aa13.92□□□□□ -0.18
HNRNPC-227ENST00000556897 NUP155O75694 1391 aa13.92□□□□□ -0.18
HNRNPC-227ENST00000556897 ROCK1Q13464 1354 aa13.92□□□□□ -0.18
HNRNPC-227ENST00000556897 ASXL1Q8IXJ9 1541 aa13.9□□□□□ -0.18
HNRNPC-227ENST00000556897 ADRA2BP18089 450 aa13.9□□□□□ -0.18
HNRNPC-227ENST00000556897 DCCP43146 1447 aa13.9□□□□□ -0.19
HNRNPC-227ENST00000556897 AFF2P51816 1311 aa13.89□□□□□ -0.19
HNRNPC-227ENST00000556897 XRN1Q8IZH2 1706 aaKnown RBP13.88□□□□□ -0.19
HNRNPC-227ENST00000556897 ITGAEP38570 1179 aa13.88□□□□□ -0.19
HNRNPC-227ENST00000556897 NRXN3Q9Y4C0 1643 aa13.88□□□□□ -0.19
HNRNPC-227ENST00000556897 MST1RQ04912 1400 aa13.88□□□□□ -0.19
HNRNPC-227ENST00000556897 SETD5Q9C0A6 1442 aa13.88□□□□□ -0.19
HNRNPC-227ENST00000556897 METP08581 1390 aa13.87□□□□□ -0.19
HNRNPC-227ENST00000556897 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
HNRNPC-227ENST00000556897 SETBP1Q9Y6X0 1596 aa13.87□□□□□ -0.19
HNRNPC-227ENST00000556897 CDK12Q9NYV4 1490 aaPredicted RBP13.87□□□□□ -0.19
HNRNPC-227ENST00000556897 DDX17Q92841 729 aaKnown RBP13.86□□□□□ -0.19
HNRNPC-227ENST00000556897 LRRC59Q96AG4 307 aaKnown RBP13.86□□□□□ -0.19
HNRNPC-227ENST00000556897 C8orf37Q96NL8 207 aa13.85□□□□□ -0.19
HNRNPC-227ENST00000556897 NHSL1Q5SYE7 1610 aa13.84□□□□□ -0.19
HNRNPC-227ENST00000556897 ADGRL3Q9HAR2 1447 aa13.83□□□□□ -0.2
HNRNPC-227ENST00000556897 SPHKAPQ2M3C7 1700 aa13.83□□□□□ -0.2
HNRNPC-227ENST00000556897 PNPLA6Q8IY17 1366 aa13.83□□□□□ -0.2
HNRNPC-227ENST00000556897 QTRT2Q9H974 415 aaKnown RBP13.82□□□□□ -0.2
HNRNPC-227ENST00000556897 RGS12O14924 1447 aa13.81□□□□□ -0.2
HNRNPC-227ENST00000556897 RBM6P78332 1123 aaKnown RBP13.81□□□□□ -0.2
HNRNPC-227ENST00000556897 SRCAPQ6ZRS2 3230 aa13.8□□□□□ -0.2
HNRNPC-227ENST00000556897 ADAMTS2O95450 1211 aa13.8□□□□□ -0.2
HNRNPC-227ENST00000556897 NALCNQ8IZF0 1738 aa13.8□□□□□ -0.2
HNRNPC-227ENST00000556897 NEXMIFQ5QGS0 1516 aa13.8□□□□□ -0.2
HNRNPC-227ENST00000556897 NGLY1Q96IV0 654 aa13.79□□□□□ -0.2
HNRNPC-227ENST00000556897 CLTCL1P53675 1640 aa13.79□□□□□ -0.2
HNRNPC-227ENST00000556897 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-227ENST00000556897 C1orf167Q5SNV9 1468 aa13.78□□□□□ -0.2
HNRNPC-227ENST00000556897 ORAI2Q96SN7 254 aa13.77□□□□□ -0.21
HNRNPC-227ENST00000556897 ROBO2Q9HCK4 1378 aa13.76□□□□□ -0.21
HNRNPC-227ENST00000556897 SOS2Q07890 1332 aaPredicted RBP13.75□□□□□ -0.21
HNRNPC-227ENST00000556897 PTCH1Q13635 1447 aa13.74□□□□□ -0.21
HNRNPC-227ENST00000556897 USP21Q9UK80 565 aa13.74□□□□□ -0.21
HNRNPC-227ENST00000556897 LAMC1P11047 1609 aa13.73□□□□□ -0.21
HNRNPC-227ENST00000556897 VGFO15240 615 aaPredicted RBP13.73□□□□□ -0.21
HNRNPC-227ENST00000556897 ATAD2Q6PL18 1390 aa13.72□□□□□ -0.21
HNRNPC-227ENST00000556897 KIF1BO60333 1816 aa13.72□□□□□ -0.21
HNRNPC-227ENST00000556897 TRPC5Q9UL62 973 aaPredicted RBP13.72□□□□□ -0.21
HNRNPC-227ENST00000556897 FNBP4Q8N3X1 1017 aaPredicted RBP13.71□□□□□ -0.21
HNRNPC-227ENST00000556897 HFM1A2PYH4 1435 aa13.69□□□□□ -0.22
HNRNPC-227ENST00000556897 NAIPQ13075 1403 aa13.69□□□□□ -0.22
HNRNPC-227ENST00000556897 PRAG1Q86YV5 1406 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms