RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 RBM46Q8TBY0 533 aaKnown RBP10.34□□□□□ -0.75
TMEM260-212ENST00000556810 NECTIN2Q92692 538 aa10.34□□□□□ -0.75
TMEM260-212ENST00000556810 ADGRG1Q9Y653 693 aa10.34□□□□□ -0.75
TMEM260-212ENST00000556810 RBM26Q5T8P6 1007 aaKnown RBP10.33□□□□□ -0.76
TMEM260-212ENST00000556810 DNAJB2P25686 324 aa10.32□□□□□ -0.76
TMEM260-212ENST00000556810 SLC4A3P48751 1232 aa10.32□□□□□ -0.76
TMEM260-212ENST00000556810 APLP1P51693 650 aa10.31□□□□□ -0.76
TMEM260-212ENST00000556810 TJAP1Q5JTD0 557 aa10.31□□□□□ -0.76
TMEM260-212ENST00000556810 VSIG10Q8N0Z9 540 aa10.31□□□□□ -0.76
TMEM260-212ENST00000556810 HIC1Q14526 733 aa10.3□□□□□ -0.76
TMEM260-212ENST00000556810 FAM161AQ3B820 660 aa10.3□□□□□ -0.76
TMEM260-212ENST00000556810 CUX2O14529 1486 aa10.3□□□□□ -0.76
TMEM260-212ENST00000556810 MTRQ99707 1265 aa10.29□□□□□ -0.76
TMEM260-212ENST00000556810 IL21Q9HBE4 155 aa10.29□□□□□ -0.76
TMEM260-212ENST00000556810 RCCD1A6NED2 376 aa10.28□□□□□ -0.76
TMEM260-212ENST00000556810 TMEM134Q9H6X4 195 aa10.28□□□□□ -0.76
TMEM260-212ENST00000556810 ERCC6Q03468 1493 aa10.28□□□□□ -0.76
TMEM260-212ENST00000556810 NCAPD3P42695 1498 aa10.27□□□□□ -0.77
TMEM260-212ENST00000556810 GNPATO15228 680 aa10.25□□□□□ -0.77
TMEM260-212ENST00000556810 GPR37O15354 613 aa10.25□□□□□ -0.77
TMEM260-212ENST00000556810 OATP04181 439 aa10.25□□□□□ -0.77
TMEM260-212ENST00000556810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.24□□□□□ -0.77
TMEM260-212ENST00000556810 PXYLP1Q8TE99 480 aa10.24□□□□□ -0.77
TMEM260-212ENST00000556810 PRR14Q9BWN1 585 aa10.24□□□□□ -0.77
TMEM260-212ENST00000556810 ZNF516Q92618 1163 aa10.23□□□□□ -0.77
TMEM260-212ENST00000556810 FECHP22830 423 aa10.22□□□□□ -0.77
TMEM260-212ENST00000556810 ATAD2BQ9ULI0 1458 aa10.22□□□□□ -0.77
TMEM260-212ENST00000556810 BAZ1AQ9NRL2 1556 aaPredicted RBP10.22□□□□□ -0.77
TMEM260-212ENST00000556810 COPS2P61201 443 aa10.21□□□□□ -0.77
TMEM260-212ENST00000556810 METTL3Q86U44 580 aaKnown RBP10.21□□□□□ -0.77
TMEM260-212ENST00000556810 GPIHBP1Q8IV16 184 aa10.21□□□□□ -0.77
TMEM260-212ENST00000556810 KMT5BQ4FZB7 885 aa10.19□□□□□ -0.78
TMEM260-212ENST00000556810 PCDHB3Q9Y5E6 796 aa10.19□□□□□ -0.78
TMEM260-212ENST00000556810 NESP48681 1621 aa10.18□□□□□ -0.78
TMEM260-212ENST00000556810 IRX2Q9BZI1 471 aaPredicted RBP10.18□□□□□ -0.78
TMEM260-212ENST00000556810 RSF1Q96T23 1441 aaPredicted RBP10.17□□□□□ -0.78
TMEM260-212ENST00000556810 CFHP08603 1231 aa10.17□□□□□ -0.78
TMEM260-212ENST00000556810 SMARCA2P51531 1590 aa10.17□□□□□ -0.78
TMEM260-212ENST00000556810 TULP1O00294 542 aaPredicted RBP10.16□□□□□ -0.78
TMEM260-212ENST00000556810 SLC10A3P09131 477 aa10.16□□□□□ -0.78
TMEM260-212ENST00000556810 PPP1R18Q6NYC8 613 aa10.16□□□□□ -0.78
TMEM260-212ENST00000556810 BLOC1S3Q6QNY0 202 aa10.16□□□□□ -0.78
TMEM260-212ENST00000556810 NKX2-3Q8TAU0 364 aa10.16□□□□□ -0.78
TMEM260-212ENST00000556810 SMARCA4P51532 1647 aa10.15□□□□□ -0.78
TMEM260-212ENST00000556810 ACTN4O43707 911 aaKnown RBP10.15□□□□□ -0.78
TMEM260-212ENST00000556810 ZPR1O75312 459 aa10.15□□□□□ -0.78
TMEM260-212ENST00000556810 HMGXB3Q12766 1538 aa10.14□□□□□ -0.79
TMEM260-212ENST00000556810 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.14□□□□□ -0.79
TMEM260-212ENST00000556810 RSPH4AQ5TD94 716 aa10.12□□□□□ -0.79
TMEM260-212ENST00000556810 DAXXQ9UER7 740 aaPredicted RBP10.12□□□□□ -0.79
TMEM260-212ENST00000556810 GGCXP38435 758 aa10.11□□□□□ -0.79
TMEM260-212ENST00000556810 NLRP7Q8WX94 980 aa10.1□□□□□ -0.79
TMEM260-212ENST00000556810 PRKD2Q9BZL6 878 aa10.1□□□□□ -0.79
TMEM260-212ENST00000556810 BAZ1BQ9UIG0 1483 aaKnown RBP10.1□□□□□ -0.79
TMEM260-212ENST00000556810 MROH2BQ7Z745 1585 aa10.09□□□□□ -0.79
TMEM260-212ENST00000556810 PHOX2BQ99453 314 aa10.09□□□□□ -0.79
TMEM260-212ENST00000556810 TLL1O43897 1013 aa10.08□□□□□ -0.8
TMEM260-212ENST00000556810 RDH13Q8NBN7 331 aa10.08□□□□□ -0.8
TMEM260-212ENST00000556810 THOC2Q8NI27 1593 aaKnown RBP10.07□□□□□ -0.8
TMEM260-212ENST00000556810 DDX11L8A8MPP1 907 aa10.07□□□□□ -0.8
TMEM260-212ENST00000556810 MAP2K5Q13163 448 aa10.07□□□□□ -0.8
TMEM260-212ENST00000556810 TMUB1Q9BVT8 246 aa10.07□□□□□ -0.8
TMEM260-212ENST00000556810 NR1I2O75469 434 aa10.06□□□□□ -0.8
TMEM260-212ENST00000556810 V9GY48 417 aaPredicted RBP10.06□□□□□ -0.8
TMEM260-212ENST00000556810 LAMC3Q9Y6N6 1575 aa10.05□□□□□ -0.8
TMEM260-212ENST00000556810 SULF1Q8IWU6 871 aa10.05□□□□□ -0.8
TMEM260-212ENST00000556810 WIZO95785 1651 aa10.05□□□□□ -0.8
TMEM260-212ENST00000556810 KIF21AQ7Z4S6 1674 aa10.04□□□□□ -0.8
TMEM260-212ENST00000556810 PUS10Q3MIT2 529 aaKnown RBP10.04□□□□□ -0.8
TMEM260-212ENST00000556810 PEG3Q9GZU2 1588 aa10.04□□□□□ -0.8
TMEM260-212ENST00000556810 RNF223E7ERA6 249 aa10.02□□□□□ -0.81
TMEM260-212ENST00000556810 IRF6O14896 467 aa10.02□□□□□ -0.81
TMEM260-212ENST00000556810 ADH1BP00325 375 aa10.02□□□□□ -0.81
TMEM260-212ENST00000556810 SCUBE3Q8IX30 993 aa10.02□□□□□ -0.81
TMEM260-212ENST00000556810 PDS5BQ9NTI5 1447 aa10.01□□□□□ -0.81
TMEM260-212ENST00000556810 S1PR4O95977 384 aa10.01□□□□□ -0.81
TMEM260-212ENST00000556810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.01□□□□□ -0.81
TMEM260-212ENST00000556810 MINK1Q8N4C8 1332 aaPredicted RBP10.01□□□□□ -0.81
TMEM260-212ENST00000556810 GCGRP47871 477 aa10□□□□□ -0.81
TMEM260-212ENST00000556810 FUT2Q10981 343 aa10□□□□□ -0.81
TMEM260-212ENST00000556810 LAPTM4AQ15012 233 aa10□□□□□ -0.81
TMEM260-212ENST00000556810 TOP2AP11388 1531 aaKnown RBP9.99□□□□□ -0.81
TMEM260-212ENST00000556810 GFRA3O60609 400 aa9.99□□□□□ -0.81
TMEM260-212ENST00000556810 MORN1Q5T089 497 aa9.99□□□□□ -0.81
TMEM260-212ENST00000556810 ATP6V1AP38606 617 aa9.98□□□□□ -0.81
TMEM260-212ENST00000556810 Q6ZNB5 142 aa9.98□□□□□ -0.81
TMEM260-212ENST00000556810 CCDC102AQ96A19 550 aa9.98□□□□□ -0.81
TMEM260-212ENST00000556810 SLC6A16Q9GZN6 736 aa9.98□□□□□ -0.81
TMEM260-212ENST00000556810 PPEF1O14829 653 aaPredicted RBP9.97□□□□□ -0.81
TMEM260-212ENST00000556810 LMOD2Q6P5Q4 547 aa9.97□□□□□ -0.81
TMEM260-212ENST00000556810 ANKLE1Q8NAG6 615 aa9.97□□□□□ -0.81
TMEM260-212ENST00000556810 SPSB2Q99619 263 aa9.97□□□□□ -0.81
TMEM260-212ENST00000556810 MDM2Q00987 491 aaPredicted RBP9.96□□□□□ -0.82
TMEM260-212ENST00000556810 CADPSQ9ULU8 1353 aa9.96□□□□□ -0.82
TMEM260-212ENST00000556810 SLC19A1P41440 591 aa9.95□□□□□ -0.82
TMEM260-212ENST00000556810 CD46P15529 392 aa9.94□□□□□ -0.82
TMEM260-212ENST00000556810 EMID1Q96A84 441 aaPredicted RBP9.94□□□□□ -0.82
TMEM260-212ENST00000556810 SLC27A5Q9Y2P5 690 aa9.94□□□□□ -0.82
TMEM260-212ENST00000556810 NRG2O14511 850 aaPredicted RBP9.93□□□□□ -0.82
TMEM260-212ENST00000556810 THAP11Q96EK4 314 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms