RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 POTECB2RU33 542 aa10.1□□□□□ -0.79
CPSF2-205ENST00000556622 TRIM67Q6ZTA4 783 aa10.1□□□□□ -0.79
CPSF2-205ENST00000556622 HMGXB3Q12766 1538 aa10.1□□□□□ -0.79
CPSF2-205ENST00000556622 RNF40O75150 1001 aa10.09□□□□□ -0.79
CPSF2-205ENST00000556622 PEG3Q9GZU2 1588 aa10.09□□□□□ -0.79
CPSF2-205ENST00000556622 PRIM1P49642 420 aaKnown RBP10.07□□□□□ -0.8
CPSF2-205ENST00000556622 PRSS12P56730 875 aa10.07□□□□□ -0.8
CPSF2-205ENST00000556622 RSF1Q96T23 1441 aaPredicted RBP10.07□□□□□ -0.8
CPSF2-205ENST00000556622 WIZO95785 1651 aa10.06□□□□□ -0.8
CPSF2-205ENST00000556622 COPS2P61201 443 aa10.06□□□□□ -0.8
CPSF2-205ENST00000556622 TATDN2Q93075 761 aa10.06□□□□□ -0.8
CPSF2-205ENST00000556622 PNMA3Q9UL41 463 aa10.06□□□□□ -0.8
CPSF2-205ENST00000556622 SUPT5HO00267 1087 aaKnown RBP10.05□□□□□ -0.8
CPSF2-205ENST00000556622 EMID1Q96A84 441 aaPredicted RBP10.05□□□□□ -0.8
CPSF2-205ENST00000556622 MYT1Q01538 1121 aa10.04□□□□□ -0.8
CPSF2-205ENST00000556622 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
CPSF2-205ENST00000556622 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
CPSF2-205ENST00000556622 NUDT18Q6ZVK8 323 aa10.01□□□□□ -0.81
CPSF2-205ENST00000556622 ERCC6Q03468 1493 aa10□□□□□ -0.81
CPSF2-205ENST00000556622 GGCXP38435 758 aa10□□□□□ -0.81
CPSF2-205ENST00000556622 PKDCCQ504Y2 493 aa9.99□□□□□ -0.81
CPSF2-205ENST00000556622 NESP48681 1621 aa9.99□□□□□ -0.81
CPSF2-205ENST00000556622 CDHR5Q9HBB8 845 aa9.98□□□□□ -0.81
CPSF2-205ENST00000556622 RNF223E7ERA6 249 aa9.97□□□□□ -0.81
CPSF2-205ENST00000556622 SLC19A1P41440 591 aa9.97□□□□□ -0.81
CPSF2-205ENST00000556622 LCE2AQ5TA79 106 aaPredicted RBP9.97□□□□□ -0.81
CPSF2-205ENST00000556622 TMUB1Q9BVT8 246 aa9.97□□□□□ -0.81
CPSF2-205ENST00000556622 ZPR1O75312 459 aa9.96□□□□□ -0.82
CPSF2-205ENST00000556622 OSBPP22059 807 aa9.96□□□□□ -0.82
CPSF2-205ENST00000556622 SWT1Q5T5J6 900 aaKnown RBP9.96□□□□□ -0.82
CPSF2-205ENST00000556622 TESPA1A2RU30 521 aaPredicted RBP9.95□□□□□ -0.82
CPSF2-205ENST00000556622 DGAT1O75907 488 aa9.95□□□□□ -0.82
CPSF2-205ENST00000556622 CADPSQ9ULU8 1353 aa9.95□□□□□ -0.82
CPSF2-205ENST00000556622 CERKQ8TCT0 537 aa9.94□□□□□ -0.82
CPSF2-205ENST00000556622 SEMA3EO15041 775 aa9.93□□□□□ -0.82
CPSF2-205ENST00000556622 SPRYD7Q5W111 196 aa9.93□□□□□ -0.82
CPSF2-205ENST00000556622 TREML4Q6UXN2 200 aa9.93□□□□□ -0.82
CPSF2-205ENST00000556622 TOP2AP11388 1531 aaKnown RBP9.92□□□□□ -0.82
CPSF2-205ENST00000556622 PDS5BQ9NTI5 1447 aa9.92□□□□□ -0.82
CPSF2-205ENST00000556622 GRXCR2A6NFK2 248 aa9.92□□□□□ -0.82
CPSF2-205ENST00000556622 FAM187AA6NFU0 413 aa9.92□□□□□ -0.82
CPSF2-205ENST00000556622 ST8SIA5O15466 376 aa9.92□□□□□ -0.82
CPSF2-205ENST00000556622 TLL1O43897 1013 aa9.92□□□□□ -0.82
CPSF2-205ENST00000556622 MLLT3P42568 568 aaPredicted RBP9.92□□□□□ -0.82
CPSF2-205ENST00000556622 HDGFP51858 240 aaKnown RBP9.92□□□□□ -0.82
CPSF2-205ENST00000556622 LAMC3Q9Y6N6 1575 aa9.92□□□□□ -0.82
CPSF2-205ENST00000556622 PPEF1O14829 653 aaPredicted RBP9.91□□□□□ -0.82
CPSF2-205ENST00000556622 PRR20EP86478 221 aa9.91□□□□□ -0.82
CPSF2-205ENST00000556622 PRR20CP86479 221 aa9.91□□□□□ -0.82
CPSF2-205ENST00000556622 PRR20DP86480 221 aa9.91□□□□□ -0.82
CPSF2-205ENST00000556622 PRR20BP86481 221 aa9.91□□□□□ -0.82
CPSF2-205ENST00000556622 PRR20AP86496 221 aa9.91□□□□□ -0.82
CPSF2-205ENST00000556622 TNFRSF10AO00220 468 aa9.9□□□□□ -0.82
CPSF2-205ENST00000556622 LIAT1Q6ZQX7 453 aa9.9□□□□□ -0.82
CPSF2-205ENST00000556622 ZNF598Q86UK7 904 aaKnown RBP9.9□□□□□ -0.82
CPSF2-205ENST00000556622 BLOC1S3Q6QNY0 202 aa9.89□□□□□ -0.83
CPSF2-205ENST00000556622 SLF2Q8IX21 1173 aa9.89□□□□□ -0.83
CPSF2-205ENST00000556622 ZNF697Q5TEC3 545 aa9.88□□□□□ -0.83
CPSF2-205ENST00000556622 PCDHB3Q9Y5E6 796 aa9.88□□□□□ -0.83
CPSF2-205ENST00000556622 CCDC88BA6NC98 1476 aa9.87□□□□□ -0.83
CPSF2-205ENST00000556622 GDF9O60383 454 aa9.87□□□□□ -0.83
CPSF2-205ENST00000556622 SMYD5Q6GMV2 418 aa9.87□□□□□ -0.83
CPSF2-205ENST00000556622 TTC13Q8NBP0 860 aa9.87□□□□□ -0.83
CPSF2-205ENST00000556622 RBM27Q9P2N5 1060 aaKnown RBP9.87□□□□□ -0.83
CPSF2-205ENST00000556622 PADI6Q6TGC4 694 aa9.86□□□□□ -0.83
CPSF2-205ENST00000556622 AAASQ9NRG9 546 aa9.86□□□□□ -0.83
CPSF2-205ENST00000556622 S1PR4O95977 384 aa9.85□□□□□ -0.83
CPSF2-205ENST00000556622 NECTIN2Q92692 538 aa9.85□□□□□ -0.83
CPSF2-205ENST00000556622 CUX2O14529 1486 aa9.85□□□□□ -0.83
CPSF2-205ENST00000556622 ANKLE1Q8NAG6 615 aa9.84□□□□□ -0.83
CPSF2-205ENST00000556622 CFTRP13569 1480 aa9.84□□□□□ -0.83
CPSF2-205ENST00000556622 NPDC1Q9NQX5 325 aaPredicted RBP9.83□□□□□ -0.84
CPSF2-205ENST00000556622 KIF21AQ7Z4S6 1674 aa9.82□□□□□ -0.84
CPSF2-205ENST00000556622 FANCD2Q9BXW9 1451 aa9.81□□□□□ -0.84
CPSF2-205ENST00000556622 PLA2G2CQ5R387 149 aa9.81□□□□□ -0.84
CPSF2-205ENST00000556622 EYA1Q99502 592 aa9.81□□□□□ -0.84
CPSF2-205ENST00000556622 DACH1Q9UI36 760 aa9.81□□□□□ -0.84
CPSF2-205ENST00000556622 CEP164Q9UPV0 1460 aa9.79□□□□□ -0.84
CPSF2-205ENST00000556622 MRC2Q9UBG0 1479 aa9.78□□□□□ -0.84
CPSF2-205ENST00000556622 PTGDRQ13258 359 aa9.77□□□□□ -0.85
CPSF2-205ENST00000556622 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.77□□□□□ -0.85
CPSF2-205ENST00000556622 PRR14Q9BWN1 585 aa9.77□□□□□ -0.85
CPSF2-205ENST00000556622 PKD2L1Q9P0L9 805 aa9.76□□□□□ -0.85
CPSF2-205ENST00000556622 THOC2Q8NI27 1593 aaKnown RBP9.75□□□□□ -0.85
CPSF2-205ENST00000556622 WFS1O76024 890 aa9.75□□□□□ -0.85
CPSF2-205ENST00000556622 RBM26Q5T8P6 1007 aaKnown RBP9.75□□□□□ -0.85
CPSF2-205ENST00000556622 SLC4A3P48751 1232 aa9.74□□□□□ -0.85
CPSF2-205ENST00000556622 FOXC1Q12948 553 aa9.74□□□□□ -0.85
CPSF2-205ENST00000556622 GMPR2Q9P2T1 348 aaKnown RBP9.74□□□□□ -0.85
CPSF2-205ENST00000556622 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
CPSF2-205ENST00000556622 GPR37O15354 613 aa9.73□□□□□ -0.85
CPSF2-205ENST00000556622 FCHSD2O94868 740 aa9.72□□□□□ -0.85
CPSF2-205ENST00000556622 ADH1BP00325 375 aa9.72□□□□□ -0.85
CPSF2-205ENST00000556622 ACTN4O43707 911 aaKnown RBP9.71□□□□□ -0.86
CPSF2-205ENST00000556622 NFX1Q12986 1120 aaKnown RBP9.71□□□□□ -0.86
CPSF2-205ENST00000556622 LCE2CQ5TA81 110 aa9.71□□□□□ -0.86
CPSF2-205ENST00000556622 STK17AQ9UEE5 414 aa9.71□□□□□ -0.86
CPSF2-205ENST00000556622 NUTM2FA1L443 756 aa9.7□□□□□ -0.86
CPSF2-205ENST00000556622 CRIPAKQ8N1N5 446 aa9.7□□□□□ -0.86
CPSF2-205ENST00000556622 WDR62O43379 1518 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms