RNA–Protein interactions for RNA: ENST00000556348.1

CCDC85C-205, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5

Gene CCDC85C, Length 556 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-205ENST00000556348 NOS1P29475 1434 aa17.76■□□□□ 0.43
CCDC85C-205ENST00000556348 HDGFP51858 240 aaKnown RBP17.76■□□□□ 0.43
CCDC85C-205ENST00000556348 ADGRB3O60242 1522 aa17.76■□□□□ 0.43
CCDC85C-205ENST00000556348 NKTRP30414 1462 aaKnown RBP17.75■□□□□ 0.43
CCDC85C-205ENST00000556348 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
CCDC85C-205ENST00000556348 NWD1Q149M9 1564 aa17.72■□□□□ 0.43
CCDC85C-205ENST00000556348 JCADQ9P266 1359 aa17.72■□□□□ 0.43
CCDC85C-205ENST00000556348 FAM50AQ14320 339 aaKnown RBP17.72■□□□□ 0.43
CCDC85C-205ENST00000556348 CHGAP10645 457 aaKnown RBP17.71■□□□□ 0.43
CCDC85C-205ENST00000556348 PHLPP1O60346 1717 aa17.71■□□□□ 0.43
CCDC85C-205ENST00000556348 PLEKHG1Q9ULL1 1385 aa17.69■□□□□ 0.42
CCDC85C-205ENST00000556348 RIMS2Q9UQ26 1411 aa17.69■□□□□ 0.42
CCDC85C-205ENST00000556348 RPRD2Q5VT52 1461 aaKnown RBP17.69■□□□□ 0.42
CCDC85C-205ENST00000556348 MEX3CQ5U5Q3 659 aaKnown RBP17.68■□□□□ 0.42
CCDC85C-205ENST00000556348 ANKRD50Q9ULJ7 1429 aa17.68■□□□□ 0.42
CCDC85C-205ENST00000556348 ZFYVE9O95405 1425 aa17.67■□□□□ 0.42
CCDC85C-205ENST00000556348 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.67■□□□□ 0.42
CCDC85C-205ENST00000556348 TBX22Q9Y458 520 aa17.67■□□□□ 0.42
CCDC85C-205ENST00000556348 CHD2O14647 1828 aaKnown RBP17.66■□□□□ 0.42
CCDC85C-205ENST00000556348 MYO5BQ9ULV0 1848 aa17.66■□□□□ 0.42
CCDC85C-205ENST00000556348 ADGRL2O95490 1459 aa17.66■□□□□ 0.42
CCDC85C-205ENST00000556348 ATF3P18847 181 aa17.65■□□□□ 0.42
CCDC85C-205ENST00000556348 NUTM2DQ5VT03 806 aaPredicted RBP17.65■□□□□ 0.42
CCDC85C-205ENST00000556348 GCC2Q8IWJ2 1684 aa17.64■□□□□ 0.42
CCDC85C-205ENST00000556348 CADPS2Q86UW7 1296 aa17.64■□□□□ 0.41
CCDC85C-205ENST00000556348 C19orf44Q9H6X5 657 aa17.63■□□□□ 0.41
CCDC85C-205ENST00000556348 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
CCDC85C-205ENST00000556348 SETD1AO15047 1707 aaKnown RBP17.63■□□□□ 0.41
CCDC85C-205ENST00000556348 NCOA3Q9Y6Q9 1424 aa17.63■□□□□ 0.41
CCDC85C-205ENST00000556348 TMEM131LA2VDJ0 1609 aa17.62■□□□□ 0.41
CCDC85C-205ENST00000556348 ZNF772Q68DY9 489 aaPredicted RBP17.62■□□□□ 0.41
CCDC85C-205ENST00000556348 COL16A1Q07092 1604 aaPredicted RBP17.61■□□□□ 0.41
CCDC85C-205ENST00000556348 TRIM52Q96A61 297 aa17.6■□□□□ 0.41
CCDC85C-205ENST00000556348 LRP6O75581 1613 aa17.58■□□□□ 0.4
CCDC85C-205ENST00000556348 ADAMTS13Q76LX8 1427 aa17.57■□□□□ 0.4
CCDC85C-205ENST00000556348 PIK3R4Q99570 1358 aa17.57■□□□□ 0.4
CCDC85C-205ENST00000556348 NUTM2BA6NNL0 878 aaPredicted RBP17.57■□□□□ 0.4
CCDC85C-205ENST00000556348 NUTM2EB1AL46 878 aaPredicted RBP17.57■□□□□ 0.4
CCDC85C-205ENST00000556348 NUTM2AQ8IVF1 878 aaPredicted RBP17.57■□□□□ 0.4
CCDC85C-205ENST00000556348 AMOTL2Q9Y2J4 779 aa17.57■□□□□ 0.4
CCDC85C-205ENST00000556348 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.57■□□□□ 0.4
CCDC85C-205ENST00000556348 DIP2AQ14689 1571 aa17.55■□□□□ 0.4
CCDC85C-205ENST00000556348 RXRBP28702 533 aa17.55■□□□□ 0.4
CCDC85C-205ENST00000556348 BRINP3Q76B58 766 aa17.54■□□□□ 0.4
CCDC85C-205ENST00000556348 UPF1Q92900 1129 aaKnown RBP eCLIP17.54■□□□□ 0.45e-7■□□□□ 9
CCDC85C-205ENST00000556348 AHDC1Q5TGY3 1603 aaPredicted RBP17.54■□□□□ 0.4
CCDC85C-205ENST00000556348 UNC13BO14795 1591 aa17.53■□□□□ 0.4
CCDC85C-205ENST00000556348 E9PCH4 1651 aa17.53■□□□□ 0.4
CCDC85C-205ENST00000556348 TRPM2O94759 1503 aa17.52■□□□□ 0.4
CCDC85C-205ENST00000556348 NUP155O75694 1391 aa17.52■□□□□ 0.39
CCDC85C-205ENST00000556348 SHPRHQ149N8 1683 aa17.52■□□□□ 0.39
CCDC85C-205ENST00000556348 PTPRUQ92729 1446 aa17.49■□□□□ 0.39
CCDC85C-205ENST00000556348 ITGAEP38570 1179 aa17.49■□□□□ 0.39
CCDC85C-205ENST00000556348 ZNF326Q5BKZ1 582 aaKnown RBP17.49■□□□□ 0.39
CCDC85C-205ENST00000556348 ROCK1Q13464 1354 aa17.49■□□□□ 0.39
CCDC85C-205ENST00000556348 IQGAP3Q86VI3 1631 aa17.48■□□□□ 0.39
CCDC85C-205ENST00000556348 AFF2P51816 1311 aa17.47■□□□□ 0.39
CCDC85C-205ENST00000556348 LRRC59Q96AG4 307 aaKnown RBP17.47■□□□□ 0.39
CCDC85C-205ENST00000556348 DCCP43146 1447 aa17.47■□□□□ 0.39
CCDC85C-205ENST00000556348 C8orf37Q96NL8 207 aa17.45■□□□□ 0.38
CCDC85C-205ENST00000556348 ASXL1Q8IXJ9 1541 aa17.45■□□□□ 0.38
CCDC85C-205ENST00000556348 MST1RQ04912 1400 aa17.43■□□□□ 0.38
CCDC85C-205ENST00000556348 SETD5Q9C0A6 1442 aa17.43■□□□□ 0.38
CCDC85C-205ENST00000556348 CDK12Q9NYV4 1490 aaPredicted RBP17.43■□□□□ 0.38
CCDC85C-205ENST00000556348 DDX17Q92841 729 aaKnown RBP17.42■□□□□ 0.38
CCDC85C-205ENST00000556348 QTRT2Q9H974 415 aaKnown RBP17.42■□□□□ 0.38
CCDC85C-205ENST00000556348 METP08581 1390 aa17.41■□□□□ 0.38
CCDC85C-205ENST00000556348 XRN1Q8IZH2 1706 aaKnown RBP17.41■□□□□ 0.38
CCDC85C-205ENST00000556348 SETBP1Q9Y6X0 1596 aa17.4■□□□□ 0.38
CCDC85C-205ENST00000556348 RBM6P78332 1123 aaKnown RBP17.4■□□□□ 0.38
CCDC85C-205ENST00000556348 NRXN3Q9Y4C0 1643 aa17.39■□□□□ 0.38
CCDC85C-205ENST00000556348 NGLY1Q96IV0 654 aa17.39■□□□□ 0.37
CCDC85C-205ENST00000556348 NHSL1Q5SYE7 1610 aa17.39■□□□□ 0.37
CCDC85C-205ENST00000556348 ADAMTS2O95450 1211 aa17.38■□□□□ 0.37
CCDC85C-205ENST00000556348 PNPLA6Q8IY17 1366 aa17.38■□□□□ 0.37
CCDC85C-205ENST00000556348 SPHKAPQ2M3C7 1700 aa17.38■□□□□ 0.37
CCDC85C-205ENST00000556348 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
CCDC85C-205ENST00000556348 RGS12O14924 1447 aa17.34■□□□□ 0.37
CCDC85C-205ENST00000556348 PPARGC1BQ86YN6 1023 aaKnown RBP17.34■□□□□ 0.37
CCDC85C-205ENST00000556348 NALCNQ8IZF0 1738 aa17.32■□□□□ 0.36
CCDC85C-205ENST00000556348 C1orf167Q5SNV9 1468 aa17.31■□□□□ 0.36
CCDC85C-205ENST00000556348 ORAI2Q96SN7 254 aa17.31■□□□□ 0.36
CCDC85C-205ENST00000556348 USP21Q9UK80 565 aa17.31■□□□□ 0.36
CCDC85C-205ENST00000556348 NEXMIFQ5QGS0 1516 aa17.31■□□□□ 0.36
CCDC85C-205ENST00000556348 VGFO15240 615 aaPredicted RBP17.3■□□□□ 0.36
CCDC85C-205ENST00000556348 CLTCL1P53675 1640 aa17.29■□□□□ 0.36
CCDC85C-205ENST00000556348 TRPC5Q9UL62 973 aaPredicted RBP17.29■□□□□ 0.36
CCDC85C-205ENST00000556348 ATAD2Q6PL18 1390 aa17.28■□□□□ 0.36
CCDC85C-205ENST00000556348 KIF1BO60333 1816 aa17.28■□□□□ 0.36
CCDC85C-205ENST00000556348 SOS2Q07890 1332 aaPredicted RBP17.27■□□□□ 0.36
CCDC85C-205ENST00000556348 ROBO2Q9HCK4 1378 aa17.27■□□□□ 0.35
CCDC85C-205ENST00000556348 FOXD1Q16676 465 aa17.26■□□□□ 0.35
CCDC85C-205ENST00000556348 PTCH1Q13635 1447 aa17.26■□□□□ 0.35
CCDC85C-205ENST00000556348 FNBP4Q8N3X1 1017 aaPredicted RBP17.24■□□□□ 0.35
CCDC85C-205ENST00000556348 ESCO1Q5FWF5 840 aa17.23■□□□□ 0.35
CCDC85C-205ENST00000556348 RPGRIP1LQ68CZ1 1315 aa17.22■□□□□ 0.35
CCDC85C-205ENST00000556348 LAMC1P11047 1609 aa17.22■□□□□ 0.35
CCDC85C-205ENST00000556348 ZRANB1Q9UGI0 708 aa17.22■□□□□ 0.35
CCDC85C-205ENST00000556348 HFM1A2PYH4 1435 aa17.21■□□□□ 0.35
CCDC85C-205ENST00000556348 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms